RNA–Protein interactions for RNA: ENST00000579743.2

GGA3-208, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-208ENST00000579743 DCAF4Q8WV16 495 aa16.19■□□□□ 0.18
GGA3-208ENST00000579743 LNPKQ9C0E8 428 aa16.19■□□□□ 0.18
GGA3-208ENST00000579743 RNF41Q9H4P4 317 aaPredicted RBP16.19■□□□□ 0.18
GGA3-208ENST00000579743 STARD7Q9NQZ5 370 aa16.19■□□□□ 0.18
GGA3-208ENST00000579743 RNF146Q9NTX7 359 aa16.19■□□□□ 0.18
GGA3-208ENST00000579743 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.19■□□□□ 0.18
GGA3-208ENST00000579743 PNMA2Q9UL42 364 aa16.19■□□□□ 0.18
GGA3-208ENST00000579743 SNAI1O95863 264 aaPredicted RBP16.18■□□□□ 0.18
GGA3-208ENST00000579743 ALAS1P13196 640 aa16.18■□□□□ 0.18
GGA3-208ENST00000579743 TLE2Q04725 743 aa16.18■□□□□ 0.18
GGA3-208ENST00000579743 KCTD1Q719H9 257 aa16.18■□□□□ 0.18
GGA3-208ENST00000579743 NOL8Q76FK4 1167 aaKnown RBP16.18■□□□□ 0.18
GGA3-208ENST00000579743 VTI1AQ96AJ9 217 aa16.18■□□□□ 0.18
GGA3-208ENST00000579743 GLT1D1Q96MS3 346 aa16.18■□□□□ 0.18
GGA3-208ENST00000579743 TRERF1Q96PN7 1200 aa16.18■□□□□ 0.18
GGA3-208ENST00000579743 MTMR7Q9Y216 660 aa16.18■□□□□ 0.18
GGA3-208ENST00000579743 MROH7Q68CQ1 1323 aa16.18■□□□□ 0.18
GGA3-208ENST00000579743 A0A1W2PQ45 241 aaPredicted RBP16.17■□□□□ 0.18
GGA3-208ENST00000579743 A0A1W2PQY0 241 aa16.17■□□□□ 0.18
GGA3-208ENST00000579743 HIP1O00291 1037 aa16.17■□□□□ 0.18
GGA3-208ENST00000579743 FGAP02671 866 aa16.17■□□□□ 0.18
GGA3-208ENST00000579743 CLTBP09497 229 aa16.17■□□□□ 0.18
GGA3-208ENST00000579743 C6orf222P0C671 652 aaPredicted RBP16.17■□□□□ 0.18
GGA3-208ENST00000579743 TOP1P11387 765 aaKnown RBP16.17■□□□□ 0.18
GGA3-208ENST00000579743 RAG1P15918 1043 aa16.17■□□□□ 0.18
GGA3-208ENST00000579743 NT5C2P49902 561 aa16.17■□□□□ 0.18
GGA3-208ENST00000579743 ACLYP53396 1101 aa16.17■□□□□ 0.18
GGA3-208ENST00000579743 VPS53Q5VIR6 699 aa16.17■□□□□ 0.18
GGA3-208ENST00000579743 MFSD6Q6ZSS7 791 aa16.17■□□□□ 0.18
GGA3-208ENST00000579743 ARMCX2Q7L311 632 aa16.17■□□□□ 0.18
GGA3-208ENST00000579743 TCP11L1Q9NUJ3 509 aa16.17■□□□□ 0.18
GGA3-208ENST00000579743 ZMYM6O95789 1325 aa16.17■□□□□ 0.18
GGA3-208ENST00000579743 CCDC171Q6TFL3 1326 aa16.17■□□□□ 0.18
GGA3-208ENST00000579743 SYNRGQ9UMZ2 1314 aa16.17■□□□□ 0.18
GGA3-208ENST00000579743 SMCHD1A6NHR9 2005 aa16.16■□□□□ 0.18
GGA3-208ENST00000579743 PQBP1O60828 265 aaKnown RBP16.16■□□□□ 0.18
GGA3-208ENST00000579743 ADAMTS4O75173 837 aa16.16■□□□□ 0.18
GGA3-208ENST00000579743 HSPD1P10809 573 aaKnown RBP16.16■□□□□ 0.18
GGA3-208ENST00000579743 KCNA10Q16322 511 aa16.16■□□□□ 0.18
GGA3-208ENST00000579743 CCDC144BQ3MJ40 725 aa16.16■□□□□ 0.18
GGA3-208ENST00000579743 CCDC178Q5BJE1 867 aa16.16■□□□□ 0.18
GGA3-208ENST00000579743 B4GALNT3Q6L9W6 998 aa16.16■□□□□ 0.18
GGA3-208ENST00000579743 CCDC174Q6PII3 467 aa16.16■□□□□ 0.18
GGA3-208ENST00000579743 CHD1LQ86WJ1 897 aa16.16■□□□□ 0.18
GGA3-208ENST00000579743 CCDC144CPQ8IYA2 1237 aa16.16■□□□□ 0.18
GGA3-208ENST00000579743 SLC17A8Q8NDX2 589 aa16.16■□□□□ 0.18
GGA3-208ENST00000579743 BADQ92934 168 aa16.16■□□□□ 0.18
GGA3-208ENST00000579743 CHMP4CQ96CF2 233 aa16.16■□□□□ 0.18
GGA3-208ENST00000579743 FAM227BQ96M60 508 aa16.16■□□□□ 0.18
GGA3-208ENST00000579743 AGBL1Q96MI9 1066 aa16.16■□□□□ 0.18
GGA3-208ENST00000579743 TTC14Q96N46 770 aa16.16■□□□□ 0.18
GGA3-208ENST00000579743 TOX2Q96NM4 488 aa16.16■□□□□ 0.18
GGA3-208ENST00000579743 MPHOSPH6Q99547 160 aaKnown RBP16.16■□□□□ 0.18
GGA3-208ENST00000579743 PDLIM7Q9NR12 457 aa16.16■□□□□ 0.18
GGA3-208ENST00000579743 IL17RBQ9NRM6 502 aa16.16■□□□□ 0.18
GGA3-208ENST00000579743 DIAPH3Q9NSV4 1193 aa16.16■□□□□ 0.18
GGA3-208ENST00000579743 TMEM39AQ9NV64 488 aa16.16■□□□□ 0.18
GGA3-208ENST00000579743 CCPG1Q9ULG6 757 aa16.16■□□□□ 0.18
GGA3-208ENST00000579743 PRR12Q9ULL5 1215 aa16.16■□□□□ 0.18
GGA3-208ENST00000579743 ELP1O95163 1332 aa16.16■□□□□ 0.18
GGA3-208ENST00000579743 A0A0D9SFI3 127 aa16.15■□□□□ 0.18
GGA3-208ENST00000579743 ZEB2O60315 1214 aa16.15■□□□□ 0.18
GGA3-208ENST00000579743 NMT2O60551 498 aa16.15■□□□□ 0.18
GGA3-208ENST00000579743 FGRP09769 529 aa16.15■□□□□ 0.18
GGA3-208ENST00000579743 CST5P28325 142 aaPredicted RBP16.15■□□□□ 0.18
GGA3-208ENST00000579743 NMIQ13287 307 aaPredicted RBP16.15■□□□□ 0.18
GGA3-208ENST00000579743 GNASQ5JWF2 1037 aa16.15■□□□□ 0.18
GGA3-208ENST00000579743 FAM109BQ6ICB4 259 aaPredicted RBP16.15■□□□□ 0.18
GGA3-208ENST00000579743 SMC5Q8IY18 1101 aa16.15■□□□□ 0.18
GGA3-208ENST00000579743 ESR2Q92731 530 aa16.15■□□□□ 0.18
GGA3-208ENST00000579743 AP5M1Q9H0R1 490 aa16.15■□□□□ 0.18
GGA3-208ENST00000579743 INCENPQ9NQS7 918 aa16.15■□□□□ 0.18
GGA3-208ENST00000579743 ADD3Q9UEY8 706 aaKnown RBP16.15■□□□□ 0.18
GGA3-208ENST00000579743 ZNF213O14771 459 aa16.14■□□□□ 0.17
GGA3-208ENST00000579743 FOXP2O15409 715 aa16.14■□□□□ 0.17
GGA3-208ENST00000579743 TLR3O15455 904 aaKnown RBP16.14■□□□□ 0.17
GGA3-208ENST00000579743 ICAM1P05362 532 aa16.14■□□□□ 0.17
GGA3-208ENST00000579743 TNFAIP2Q03169 654 aa16.14■□□□□ 0.17
GGA3-208ENST00000579743 AKNAD1Q5T1N1 836 aa16.14■□□□□ 0.17
GGA3-208ENST00000579743 ANKRD33Q7Z3H0 272 aa16.14■□□□□ 0.17
GGA3-208ENST00000579743 FAM133AQ8N9E0 248 aa16.14■□□□□ 0.17
GGA3-208ENST00000579743 KLHDC9Q8NEP7 349 aa16.14■□□□□ 0.17
GGA3-208ENST00000579743 A1CFQ9NQ94 594 aaKnown RBP16.14■□□□□ 0.17
GGA3-208ENST00000579743 STXBP5LQ9Y2K9 1186 aa16.14■□□□□ 0.17
GGA3-208ENST00000579743 A0A0U1RQG5 324 aaPredicted RBP16.13■□□□□ 0.17
GGA3-208ENST00000579743 B4DLN1 442 aa16.13■□□□□ 0.17
GGA3-208ENST00000579743 CABYRO75952 493 aa16.13■□□□□ 0.17
GGA3-208ENST00000579743 ASGR1P07306 291 aa16.13■□□□□ 0.17
GGA3-208ENST00000579743 SDSP20132 328 aa16.13■□□□□ 0.17
GGA3-208ENST00000579743 NOVP48745 357 aa16.13■□□□□ 0.17
GGA3-208ENST00000579743 MRPL12P52815 198 aaKnown RBP16.13■□□□□ 0.17
GGA3-208ENST00000579743 GJA9P57773 515 aa16.13■□□□□ 0.17
GGA3-208ENST00000579743 CNTN2Q02246 1040 aa16.13■□□□□ 0.17
GGA3-208ENST00000579743 ZNF697Q5TEC3 545 aa16.13■□□□□ 0.17
GGA3-208ENST00000579743 SYDE2Q5VT97 1194 aa16.13■□□□□ 0.17
GGA3-208ENST00000579743 NSMFQ6X4W1 530 aa16.13■□□□□ 0.17
GGA3-208ENST00000579743 IQCA1Q86XH1 822 aa16.13■□□□□ 0.17
GGA3-208ENST00000579743 LENG1Q96BZ8 264 aaPredicted RBP16.13■□□□□ 0.17
GGA3-208ENST00000579743 TMEM47Q9BQJ4 181 aa16.13■□□□□ 0.17
GGA3-208ENST00000579743 SEZ6LQ9BYH1 1024 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms