RNA–Protein interactions for RNA: ENST00000579040.5

SSH2-208, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 1 (best)

Gene SSH2, Length 965 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-208ENST00000579040 PHF24Q9UPV7 400 aa13.63□□□□□ -0.23
SSH2-208ENST00000579040 SNAI1O95863 264 aaPredicted RBP13.62□□□□□ -0.23
SSH2-208ENST00000579040 TOP1P11387 765 aaKnown RBP13.62□□□□□ -0.23
SSH2-208ENST00000579040 TAL1P17542 331 aaPredicted RBP13.62□□□□□ -0.23
SSH2-208ENST00000579040 ADCYAP1R1P41586 468 aa13.62□□□□□ -0.23
SSH2-208ENST00000579040 AKNAD1Q5T1N1 836 aa13.62□□□□□ -0.23
SSH2-208ENST00000579040 MFSD6Q6ZSS7 791 aa13.62□□□□□ -0.23
SSH2-208ENST00000579040 KCTD1Q719H9 257 aa13.62□□□□□ -0.23
SSH2-208ENST00000579040 TDHQ8IZJ6 230 aa13.62□□□□□ -0.23
SSH2-208ENST00000579040 UBE2OQ9C0C9 1292 aaKnown RBP13.62□□□□□ -0.23
SSH2-208ENST00000579040 RNF41Q9H4P4 317 aaPredicted RBP13.62□□□□□ -0.23
SSH2-208ENST00000579040 DIAPH3Q9NSV4 1193 aa13.62□□□□□ -0.23
SSH2-208ENST00000579040 RNF146Q9NTX7 359 aa13.62□□□□□ -0.23
SSH2-208ENST00000579040 PRKAG2Q9UGJ0 569 aa13.62□□□□□ -0.23
SSH2-208ENST00000579040 FAM184BQ9ULE4 1060 aa13.62□□□□□ -0.23
SSH2-208ENST00000579040 LCTP09848 1927 aa13.62□□□□□ -0.23
SSH2-208ENST00000579040 ZNF536O15090 1300 aa13.62□□□□□ -0.23
SSH2-208ENST00000579040 LRRC37A2A6NM11 1700 aa13.61□□□□□ -0.23
SSH2-208ENST00000579040 MYCNP04198 464 aaPredicted RBP13.61□□□□□ -0.23
SSH2-208ENST00000579040 CCDC96Q2M329 555 aa13.61□□□□□ -0.23
SSH2-208ENST00000579040 LRIT3Q3SXY7 679 aa13.61□□□□□ -0.23
SSH2-208ENST00000579040 RRP12Q5JTH9 1297 aaKnown RBP13.61□□□□□ -0.23
SSH2-208ENST00000579040 GPR153Q6NV75 609 aa13.61□□□□□ -0.23
SSH2-208ENST00000579040 BTNL9Q6UXG8 535 aa13.61□□□□□ -0.23
SSH2-208ENST00000579040 FGD4Q96M96 766 aa13.61□□□□□ -0.23
SSH2-208ENST00000579040 TTC14Q96N46 770 aa13.61□□□□□ -0.23
SSH2-208ENST00000579040 LBHD1Q9BQE6 289 aaPredicted RBP13.61□□□□□ -0.23
SSH2-208ENST00000579040 TSEN34Q9BSV6 310 aaKnown RBP13.61□□□□□ -0.23
SSH2-208ENST00000579040 ABHD16BQ9H3Z7 469 aa13.61□□□□□ -0.23
SSH2-208ENST00000579040 HOMER2Q9NSB8 354 aa13.61□□□□□ -0.23
SSH2-208ENST00000579040 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.61□□□□□ -0.23
SSH2-208ENST00000579040 PRR12Q9ULL5 1215 aa13.61□□□□□ -0.23
SSH2-208ENST00000579040 ATP11BQ9Y2G3 1177 aa13.61□□□□□ -0.23
SSH2-208ENST00000579040 DNAH12Q6ZR08 3092 aa13.61□□□□□ -0.23
SSH2-208ENST00000579040 POTEB2H3BUK9 544 aa13.6□□□□□ -0.23
SSH2-208ENST00000579040 DUSP11O75319 330 aaKnown RBP13.6□□□□□ -0.23
SSH2-208ENST00000579040 PGK1P00558 417 aa13.6□□□□□ -0.23
SSH2-208ENST00000579040 HAND2P61296 217 aa13.6□□□□□ -0.23
SSH2-208ENST00000579040 ACVR2BQ13705 512 aa13.6□□□□□ -0.23
SSH2-208ENST00000579040 ARMCX2Q7L311 632 aa13.6□□□□□ -0.23
SSH2-208ENST00000579040 FAM133AQ8N9E0 248 aa13.6□□□□□ -0.23
SSH2-208ENST00000579040 AGBL1Q96MI9 1066 aa13.6□□□□□ -0.23
SSH2-208ENST00000579040 TRERF1Q96PN7 1200 aa13.6□□□□□ -0.23
SSH2-208ENST00000579040 TMEM47Q9BQJ4 181 aa13.6□□□□□ -0.23
SSH2-208ENST00000579040 A1CFQ9NQ94 594 aaKnown RBP13.6□□□□□ -0.23
SSH2-208ENST00000579040 ZHX1Q9UKY1 873 aaPredicted RBP13.6□□□□□ -0.23
SSH2-208ENST00000579040 MYH6P13533 1939 aa13.6□□□□□ -0.23
SSH2-208ENST00000579040 ASB14A6NK59 587 aa13.59□□□□□ -0.23
SSH2-208ENST00000579040 SOX1O00570 391 aaPredicted RBP13.59□□□□□ -0.23
SSH2-208ENST00000579040 ADAMTS4O75173 837 aa13.59□□□□□ -0.23
SSH2-208ENST00000579040 ICAM1P05362 532 aa13.59□□□□□ -0.23
SSH2-208ENST00000579040 ALAS1P13196 640 aa13.59□□□□□ -0.23
SSH2-208ENST00000579040 CST5P28325 142 aaPredicted RBP13.59□□□□□ -0.23
SSH2-208ENST00000579040 MDM2Q00987 491 aaPredicted RBP13.59□□□□□ -0.23
SSH2-208ENST00000579040 TRIM60Q495X7 471 aa13.59□□□□□ -0.23
SSH2-208ENST00000579040 CWC27Q6UX04 472 aaKnown RBP13.59□□□□□ -0.23
SSH2-208ENST00000579040 RASGRP2Q7LDG7 609 aa13.59□□□□□ -0.23
SSH2-208ENST00000579040 TBC1D10CQ8IV04 446 aa13.59□□□□□ -0.23
SSH2-208ENST00000579040 ESR2Q92731 530 aa13.59□□□□□ -0.23
SSH2-208ENST00000579040 FERMT2Q96AC1 680 aa13.59□□□□□ -0.23
SSH2-208ENST00000579040 DSCC1Q9BVC3 393 aa13.59□□□□□ -0.23
SSH2-208ENST00000579040 RANBP17Q9H2T7 1088 aaKnown RBP13.59□□□□□ -0.23
SSH2-208ENST00000579040 PNMA2Q9UL42 364 aa13.59□□□□□ -0.23
SSH2-208ENST00000579040 CCPG1Q9ULG6 757 aa13.59□□□□□ -0.23
SSH2-208ENST00000579040 SUPT16HQ9Y5B9 1047 aaKnown RBP13.59□□□□□ -0.23
SSH2-208ENST00000579040 SYNRGQ9UMZ2 1314 aa13.59□□□□□ -0.23
SSH2-208ENST00000579040 A0A1W2PQ45 241 aaPredicted RBP13.58□□□□□ -0.24
SSH2-208ENST00000579040 A0A1W2PQY0 241 aa13.58□□□□□ -0.24
SSH2-208ENST00000579040 MOXD2PA6NHM9 499 aa13.58□□□□□ -0.24
SSH2-208ENST00000579040 ZNF213O14771 459 aa13.58□□□□□ -0.24
SSH2-208ENST00000579040 PDHBP11177 359 aa13.58□□□□□ -0.24
SSH2-208ENST00000579040 CNTN2Q02246 1040 aa13.58□□□□□ -0.24
SSH2-208ENST00000579040 CCDC178Q5BJE1 867 aa13.58□□□□□ -0.24
SSH2-208ENST00000579040 SYDE2Q5VT97 1194 aa13.58□□□□□ -0.24
SSH2-208ENST00000579040 CCDC174Q6PII3 467 aa13.58□□□□□ -0.24
SSH2-208ENST00000579040 CCDC144CPQ8IYA2 1237 aa13.58□□□□□ -0.24
SSH2-208ENST00000579040 KLHDC9Q8NEP7 349 aa13.58□□□□□ -0.24
SSH2-208ENST00000579040 LENG1Q96BZ8 264 aaPredicted RBP13.58□□□□□ -0.24
SSH2-208ENST00000579040 CHMP4CQ96CF2 233 aa13.58□□□□□ -0.24
SSH2-208ENST00000579040 LRCH3Q96II8 777 aa13.58□□□□□ -0.24
SSH2-208ENST00000579040 UPF3AQ9H1J1 476 aaKnown RBP13.58□□□□□ -0.24
SSH2-208ENST00000579040 SPC25Q9HBM1 224 aa13.58□□□□□ -0.24
SSH2-208ENST00000579040 PDLIM7Q9NR12 457 aa13.58□□□□□ -0.24
SSH2-208ENST00000579040 MTMR7Q9Y216 660 aa13.58□□□□□ -0.24
SSH2-208ENST00000579040 SNHG28P0DPA3 235 aa13.57□□□□□ -0.24
SSH2-208ENST00000579040 ACLYP53396 1101 aa13.57□□□□□ -0.24
SSH2-208ENST00000579040 ZNF543Q08ER8 600 aa13.57□□□□□ -0.24
SSH2-208ENST00000579040 CCDC144BQ3MJ40 725 aa13.57□□□□□ -0.24
SSH2-208ENST00000579040 MUM1L1Q5H9M0 696 aa13.57□□□□□ -0.24
SSH2-208ENST00000579040 TTBK2Q6IQ55 1244 aa13.57□□□□□ -0.24
SSH2-208ENST00000579040 DGKHQ86XP1 1220 aa13.57□□□□□ -0.24
SSH2-208ENST00000579040 PCSK9Q8NBP7 692 aaKnown RBP13.57□□□□□ -0.24
SSH2-208ENST00000579040 NUP133Q8WUM0 1156 aa13.57□□□□□ -0.24
SSH2-208ENST00000579040 KATNBL1Q9H079 304 aa13.57□□□□□ -0.24
SSH2-208ENST00000579040 CYP39A1Q9NYL5 469 aa13.57□□□□□ -0.24
SSH2-208ENST00000579040 CTNNA3Q9UI47 895 aa13.57□□□□□ -0.24
SSH2-208ENST00000579040 NEDD4P46934 1319 aa13.57□□□□□ -0.24
SSH2-208ENST00000579040 LOC102724159A0A0B4J2E5 919 aa13.56□□□□□ -0.24
SSH2-208ENST00000579040 SOWAHBA6NEL2 793 aa13.56□□□□□ -0.24
SSH2-208ENST00000579040 SLC16A2P36021 539 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms