RNA–Protein interactions for RNA: ENST00000578547.1

IFT20-207, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best)

Gene IFT20, Length 962 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-207ENST00000578547 FUT2Q10981 343 aa14.06□□□□□ -0.16
IFT20-207ENST00000578547 NTRK3Q16288 839 aa14.06□□□□□ -0.16
IFT20-207ENST00000578547 QRICH1Q2TAL8 776 aa14.06□□□□□ -0.16
IFT20-207ENST00000578547 TRIM22Q8IYM9 498 aa14.06□□□□□ -0.16
IFT20-207ENST00000578547 NSUN7Q8NE18 718 aaKnown RBP14.06□□□□□ -0.16
IFT20-207ENST00000578547 DDX11Q96FC9 970 aa14.06□□□□□ -0.16
IFT20-207ENST00000578547 CFHR5Q9BXR6 569 aa14.06□□□□□ -0.16
IFT20-207ENST00000578547 RIOX1Q9H6W3 641 aa14.06□□□□□ -0.16
IFT20-207ENST00000578547 SAGE1Q9NXZ1 904 aa14.06□□□□□ -0.16
IFT20-207ENST00000578547 CPA4Q9UI42 421 aa14.06□□□□□ -0.16
IFT20-207ENST00000578547 V9GY48 417 aaPredicted RBP14.06□□□□□ -0.16
IFT20-207ENST00000578547 ADGRA2Q96PE1 1338 aa14.06□□□□□ -0.16
IFT20-207ENST00000578547 A0A0G2JMZ2 1700 aa14.06□□□□□ -0.16
IFT20-207ENST00000578547 FMNL1O95466 1100 aaPredicted RBP14.05□□□□□ -0.16
IFT20-207ENST00000578547 TAL1P17542 331 aaPredicted RBP14.05□□□□□ -0.16
IFT20-207ENST00000578547 SMARCA1P28370 1054 aa14.05□□□□□ -0.16
IFT20-207ENST00000578547 PLS1Q14651 629 aa14.05□□□□□ -0.16
IFT20-207ENST00000578547 C17orf99Q6UX52 265 aa14.05□□□□□ -0.16
IFT20-207ENST00000578547 LBX2Q6XYB7 198 aa14.05□□□□□ -0.16
IFT20-207ENST00000578547 CPXCR1Q8N123 301 aa14.05□□□□□ -0.16
IFT20-207ENST00000578547 SPRYD3Q8NCJ5 442 aa14.05□□□□□ -0.16
IFT20-207ENST00000578547 RANBP17Q9H2T7 1088 aaKnown RBP14.05□□□□□ -0.16
IFT20-207ENST00000578547 SLC38A10Q9HBR0 1119 aa14.05□□□□□ -0.16
IFT20-207ENST00000578547 RAVER2Q9HCJ3 691 aaKnown RBP14.05□□□□□ -0.16
IFT20-207ENST00000578547 TXNRD2Q9NNW7 524 aa14.05□□□□□ -0.16
IFT20-207ENST00000578547 RBPJLQ9UBG7 517 aa14.05□□□□□ -0.16
IFT20-207ENST00000578547 TSKSQ9UJT2 592 aa14.05□□□□□ -0.16
IFT20-207ENST00000578547 ADAMTS5Q9UNA0 930 aa14.05□□□□□ -0.16
IFT20-207ENST00000578547 COL11A1P12107 1806 aaPredicted RBP14.05□□□□□ -0.16
IFT20-207ENST00000578547 ZBTB5O15062 677 aa14.04□□□□□ -0.16
IFT20-207ENST00000578547 CNMDO75829 334 aa14.04□□□□□ -0.16
IFT20-207ENST00000578547 GCLCP48506 637 aaPredicted RBP14.04□□□□□ -0.16
IFT20-207ENST00000578547 FOSBP53539 338 aa14.04□□□□□ -0.16
IFT20-207ENST00000578547 Q3C1V9 767 aa14.04□□□□□ -0.16
IFT20-207ENST00000578547 USH1GQ495M9 461 aa14.04□□□□□ -0.16
IFT20-207ENST00000578547 HEATR3Q7Z4Q2 680 aa14.04□□□□□ -0.16
IFT20-207ENST00000578547 ANKRD13CQ8N6S4 541 aa14.04□□□□□ -0.16
IFT20-207ENST00000578547 MB21D1Q8N884 522 aa14.04□□□□□ -0.16
IFT20-207ENST00000578547 GTF3C2Q8WUA4 911 aaPredicted RBP14.04□□□□□ -0.16
IFT20-207ENST00000578547 GPKOWQ92917 476 aaPredicted RBP eCLIP14.04□□□□□ -0.16
IFT20-207ENST00000578547 LLPHQ9BRT6 129 aaKnown RBP14.04□□□□□ -0.16
IFT20-207ENST00000578547 RNF26Q9BY78 433 aaPredicted RBP14.04□□□□□ -0.16
IFT20-207ENST00000578547 BTBD7Q9P203 1132 aa14.04□□□□□ -0.16
IFT20-207ENST00000578547 ORC3Q9UBD5 711 aaPredicted RBP14.04□□□□□ -0.16
IFT20-207ENST00000578547 CCPG1Q9ULG6 757 aa14.04□□□□□ -0.16
IFT20-207ENST00000578547 BAZ2BQ9UIF8 2168 aaKnown RBP14.03□□□□□ -0.16
IFT20-207ENST00000578547 PNMA6FA0A0J9YX94 578 aa14.03□□□□□ -0.16
IFT20-207ENST00000578547 PRPF3O43395 683 aaKnown RBP14.03□□□□□ -0.16
IFT20-207ENST00000578547 PPP1R11O60927 126 aaPredicted RBP14.03□□□□□ -0.16
IFT20-207ENST00000578547 BCRP11274 1271 aa14.03□□□□□ -0.16
IFT20-207ENST00000578547 CUL4AQ13619 759 aa14.03□□□□□ -0.16
IFT20-207ENST00000578547 TMEM132BQ14DG7 1078 aa14.03□□□□□ -0.16
IFT20-207ENST00000578547 FBXO11Q86XK2 927 aa14.03□□□□□ -0.16
IFT20-207ENST00000578547 REPS2Q8NFH8 660 aa14.03□□□□□ -0.16
IFT20-207ENST00000578547 MTMR8Q96EF0 704 aa14.03□□□□□ -0.16
IFT20-207ENST00000578547 AGBL1Q96MI9 1066 aa14.03□□□□□ -0.16
IFT20-207ENST00000578547 AIFM3Q96NN9 605 aa14.03□□□□□ -0.16
IFT20-207ENST00000578547 HOMER2Q9NSB8 354 aa14.03□□□□□ -0.16
IFT20-207ENST00000578547 RBM27Q9P2N5 1060 aaKnown RBP14.03□□□□□ -0.16
IFT20-207ENST00000578547 SMC3Q9UQE7 1217 aa14.03□□□□□ -0.16
IFT20-207ENST00000578547 RABGAP1Q9Y3P9 1069 aa14.03□□□□□ -0.16
IFT20-207ENST00000578547 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.03□□□□□ -0.16
IFT20-207ENST00000578547 STK36Q9NRP7 1315 aa14.03□□□□□ -0.16
IFT20-207ENST00000578547 MYH6P13533 1939 aa14.02□□□□□ -0.16
IFT20-207ENST00000578547 ZNF536O15090 1300 aa14.02□□□□□ -0.17
IFT20-207ENST00000578547 FOXN1O15353 648 aa14.02□□□□□ -0.17
IFT20-207ENST00000578547 ICAM1P05362 532 aa14.02□□□□□ -0.17
IFT20-207ENST00000578547 HSPA1AP0DMV8 641 aaKnown RBP14.02□□□□□ -0.17
IFT20-207ENST00000578547 HSPA1BP0DMV9 641 aaKnown RBP14.02□□□□□ -0.17
IFT20-207ENST00000578547 FDX1P10109 184 aa14.02□□□□□ -0.17
IFT20-207ENST00000578547 SCG2P13521 617 aa14.02□□□□□ -0.17
IFT20-207ENST00000578547 SNRNP48Q6IEG0 339 aaKnown RBP14.02□□□□□ -0.17
IFT20-207ENST00000578547 FAM184AQ8NB25 1140 aa14.02□□□□□ -0.17
IFT20-207ENST00000578547 GPRC5AQ8NFJ5 357 aa14.02□□□□□ -0.17
IFT20-207ENST00000578547 SMARCC2Q8TAQ2 1214 aa14.02□□□□□ -0.17
IFT20-207ENST00000578547 COA7Q96BR5 231 aa14.02□□□□□ -0.17
IFT20-207ENST00000578547 AMNQ9BXJ7 453 aa14.02□□□□□ -0.17
IFT20-207ENST00000578547 MORF4L1Q9UBU8 362 aa14.02□□□□□ -0.17
IFT20-207ENST00000578547 ZNF214Q9UL59 606 aaPredicted RBP14.02□□□□□ -0.17
IFT20-207ENST00000578547 GPR25O00155 361 aa14.01□□□□□ -0.17
IFT20-207ENST00000578547 ECM2O94769 699 aaPredicted RBP14.01□□□□□ -0.17
IFT20-207ENST00000578547 DEXIO95424 95 aa14.01□□□□□ -0.17
IFT20-207ENST00000578547 ALAS1P13196 640 aa14.01□□□□□ -0.17
IFT20-207ENST00000578547 FDPSP14324 419 aaKnown RBP14.01□□□□□ -0.17
IFT20-207ENST00000578547 GJB2P29033 226 aa14.01□□□□□ -0.17
IFT20-207ENST00000578547 STAT3P40763 770 aa14.01□□□□□ -0.17
IFT20-207ENST00000578547 OAZ1P54368 228 aa14.01□□□□□ -0.17
IFT20-207ENST00000578547 ERVK-9P63128 1117 aa14.01□□□□□ -0.17
IFT20-207ENST00000578547 ERVK-24P63145 666 aa14.01□□□□□ -0.17
IFT20-207ENST00000578547 HMGN5P82970 282 aaKnown RBP14.01□□□□□ -0.17
IFT20-207ENST00000578547 PKN1Q16512 942 aa14.01□□□□□ -0.17
IFT20-207ENST00000578547 PFKFB3Q16875 520 aaPredicted RBP14.01□□□□□ -0.17
IFT20-207ENST00000578547 WDR78Q5VTH9 848 aa14.01□□□□□ -0.17
IFT20-207ENST00000578547 WWC2Q6AWC2 1192 aa14.01□□□□□ -0.17
IFT20-207ENST00000578547 WASF1Q92558 559 aa14.01□□□□□ -0.17
IFT20-207ENST00000578547 ALG1Q9BT22 464 aa14.01□□□□□ -0.17
IFT20-207ENST00000578547 TEX13BQ9BXU2 312 aa14.01□□□□□ -0.17
IFT20-207ENST00000578547 SPATC1LQ9H0A9 340 aa14.01□□□□□ -0.17
IFT20-207ENST00000578547 DAXXQ9UER7 740 aaPredicted RBP14.01□□□□□ -0.17
IFT20-207ENST00000578547 PCDHA1Q9Y5I3 950 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms