RNA–Protein interactions for RNA: ENST00000578525.5

CDK5RAP3-208, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 564 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-208ENST00000578525 PPP4R3BQ5MIZ7 849 aa10.54□□□□□ -0.72
CDK5RAP3-208ENST00000578525 USP17L2Q6R6M4 530 aa10.54□□□□□ -0.72
CDK5RAP3-208ENST00000578525 RASGRP2Q7LDG7 609 aa10.54□□□□□ -0.72
CDK5RAP3-208ENST00000578525 KRT27Q7Z3Y8 459 aa10.54□□□□□ -0.72
CDK5RAP3-208ENST00000578525 NEK8Q86SG6 692 aa10.54□□□□□ -0.72
CDK5RAP3-208ENST00000578525 CABP7Q86V35 215 aa10.54□□□□□ -0.72
CDK5RAP3-208ENST00000578525 IGSF22Q8N9C0 903 aa10.54□□□□□ -0.72
CDK5RAP3-208ENST00000578525 ZNF397Q8NF99 534 aaPredicted RBP10.54□□□□□ -0.72
CDK5RAP3-208ENST00000578525 RASSF8Q8NHQ8 419 aa10.54□□□□□ -0.72
CDK5RAP3-208ENST00000578525 PIGSQ96S52 555 aa10.54□□□□□ -0.72
CDK5RAP3-208ENST00000578525 NAA15Q9BXJ9 866 aaKnown RBP10.54□□□□□ -0.72
CDK5RAP3-208ENST00000578525 RIOX1Q9H6W3 641 aa10.54□□□□□ -0.72
CDK5RAP3-208ENST00000578525 QTRT2Q9H974 415 aaKnown RBP10.54□□□□□ -0.72
CDK5RAP3-208ENST00000578525 SWAP70Q9UH65 585 aa10.54□□□□□ -0.72
CDK5RAP3-208ENST00000578525 DNAI1Q9UI46 699 aa10.54□□□□□ -0.72
CDK5RAP3-208ENST00000578525 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.54□□□□□ -0.729e-8■■□□□ 13.3
CDK5RAP3-208ENST00000578525 PP2D1A8MPX8 630 aa10.53□□□□□ -0.72
CDK5RAP3-208ENST00000578525 USP17L5A8MUK1 530 aa10.53□□□□□ -0.72
CDK5RAP3-208ENST00000578525 H7C1D1 291 aa10.53□□□□□ -0.72
CDK5RAP3-208ENST00000578525 KLRC4O43908 158 aa10.53□□□□□ -0.72
CDK5RAP3-208ENST00000578525 MFAP3LO75121 409 aa10.53□□□□□ -0.72
CDK5RAP3-208ENST00000578525 TRIM37O94972 964 aa10.53□□□□□ -0.72
CDK5RAP3-208ENST00000578525 TPM1P09493 284 aa10.53□□□□□ -0.72
CDK5RAP3-208ENST00000578525 SNHG28P0DPA3 235 aa10.53□□□□□ -0.72
CDK5RAP3-208ENST00000578525 PDHBP11177 359 aa10.53□□□□□ -0.72
CDK5RAP3-208ENST00000578525 FECHP22830 423 aa10.53□□□□□ -0.72
CDK5RAP3-208ENST00000578525 TRIM14Q14142 442 aa10.53□□□□□ -0.72
CDK5RAP3-208ENST00000578525 NAA30Q147X3 362 aaPredicted RBP10.53□□□□□ -0.72
CDK5RAP3-208ENST00000578525 KRT31Q15323 416 aa10.53□□□□□ -0.72
CDK5RAP3-208ENST00000578525 TXNRD1Q16881 649 aa10.53□□□□□ -0.72
CDK5RAP3-208ENST00000578525 KMT5BQ4FZB7 885 aa10.53□□□□□ -0.72
CDK5RAP3-208ENST00000578525 PPP1R18Q6NYC8 613 aa10.53□□□□□ -0.72
CDK5RAP3-208ENST00000578525 DPP8Q6V1X1 898 aaPredicted RBP10.53□□□□□ -0.72
CDK5RAP3-208ENST00000578525 ADSSL1Q8N142 457 aa10.53□□□□□ -0.72
CDK5RAP3-208ENST00000578525 NOC3LQ8WTT2 800 aaKnown RBP10.53□□□□□ -0.72
CDK5RAP3-208ENST00000578525 CCDC47Q96A33 483 aaKnown RBP10.53□□□□□ -0.72
CDK5RAP3-208ENST00000578525 SRRTQ9BXP5 876 aaKnown RBP10.53□□□□□ -0.72
CDK5RAP3-208ENST00000578525 GTPBP4Q9BZE4 634 aaKnown RBP10.53□□□□□ -0.72
CDK5RAP3-208ENST00000578525 CPVLQ9H3G5 476 aa10.53□□□□□ -0.72
CDK5RAP3-208ENST00000578525 MTMR4Q9NYA4 1195 aa10.53□□□□□ -0.72
CDK5RAP3-208ENST00000578525 GDAQ9Y2T3 454 aa10.53□□□□□ -0.72
CDK5RAP3-208ENST00000578525 COL11A2P13942 1736 aaPredicted RBP10.53□□□□□ -0.72
CDK5RAP3-208ENST00000578525 LRRC10BA6NIK2 292 aa10.52□□□□□ -0.73
CDK5RAP3-208ENST00000578525 KCNJ18B7U540 433 aa10.52□□□□□ -0.73
CDK5RAP3-208ENST00000578525 N4BP3O15049 544 aa10.52□□□□□ -0.73
CDK5RAP3-208ENST00000578525 CCNT1O60563 726 aaKnown RBP10.52□□□□□ -0.73
CDK5RAP3-208ENST00000578525 RHOBTB3O94955 611 aa10.52□□□□□ -0.73
CDK5RAP3-208ENST00000578525 AKR1B1P15121 316 aa10.52□□□□□ -0.73
CDK5RAP3-208ENST00000578525 CDC25AP30304 524 aa10.52□□□□□ -0.73
CDK5RAP3-208ENST00000578525 PPP1R2P41236 205 aa10.52□□□□□ -0.73
CDK5RAP3-208ENST00000578525 PRCPP42785 496 aa10.52□□□□□ -0.73
CDK5RAP3-208ENST00000578525 ADCY7P51828 1080 aa10.52□□□□□ -0.73
CDK5RAP3-208ENST00000578525 RBL2Q08999 1139 aa10.52□□□□□ -0.73
CDK5RAP3-208ENST00000578525 PICALMQ13492 652 aa10.52□□□□□ -0.73
CDK5RAP3-208ENST00000578525 STIM1Q13586 685 aa10.52□□□□□ -0.73
CDK5RAP3-208ENST00000578525 KCNJ12Q14500 433 aa10.52□□□□□ -0.73
CDK5RAP3-208ENST00000578525 LETM2Q2VYF4 491 aa10.52□□□□□ -0.73
CDK5RAP3-208ENST00000578525 TCP11X2Q5H9J9 407 aa10.52□□□□□ -0.73
CDK5RAP3-208ENST00000578525 TOGARAM2Q6ZUX3 1019 aa10.52□□□□□ -0.73
CDK5RAP3-208ENST00000578525 CNGA4Q8IV77 575 aa10.52□□□□□ -0.73
CDK5RAP3-208ENST00000578525 REXO1Q8N1G1 1221 aaKnown RBP10.52□□□□□ -0.73
CDK5RAP3-208ENST00000578525 NLGN1Q8N2Q7 840 aa10.52□□□□□ -0.73
CDK5RAP3-208ENST00000578525 CERS5Q8N5B7 392 aa10.52□□□□□ -0.73
CDK5RAP3-208ENST00000578525 ZC3H12CQ9C0D7 883 aaKnown RBP10.52□□□□□ -0.73
CDK5RAP3-208ENST00000578525 UBA5Q9GZZ9 404 aa10.52□□□□□ -0.73
CDK5RAP3-208ENST00000578525 VAT1LQ9HCJ6 419 aa10.52□□□□□ -0.73
CDK5RAP3-208ENST00000578525 DDX4Q9NQI0 724 aaKnown RBP10.52□□□□□ -0.73
CDK5RAP3-208ENST00000578525 USP40Q9NVE5 1235 aa10.52□□□□□ -0.73
CDK5RAP3-208ENST00000578525 KBTBD4Q9NVX7 518 aa10.52□□□□□ -0.73
CDK5RAP3-208ENST00000578525 TAB2Q9NYJ8 693 aa10.52□□□□□ -0.73
CDK5RAP3-208ENST00000578525 TTF2Q9UNY4 1162 aaKnown RBP10.52□□□□□ -0.73
CDK5RAP3-208ENST00000578525 GREB1LQ9C091 1923 aaPredicted RBP10.52□□□□□ -0.73
CDK5RAP3-208ENST00000578525 FRMPD2Q68DX3 1309 aaPredicted RBP10.52□□□□□ -0.73
CDK5RAP3-208ENST00000578525 MYH8P13535 1937 aa10.51□□□□□ -0.73
CDK5RAP3-208ENST00000578525 PSMA7O14818 248 aa10.51□□□□□ -0.73
CDK5RAP3-208ENST00000578525 HLA-DOAP06340 250 aa10.51□□□□□ -0.73
CDK5RAP3-208ENST00000578525 CCDC175P0C221 793 aa10.51□□□□□ -0.73
CDK5RAP3-208ENST00000578525 SRGNP10124 158 aa10.51□□□□□ -0.73
CDK5RAP3-208ENST00000578525 PLCG1P19174 1290 aa10.51□□□□□ -0.73
CDK5RAP3-208ENST00000578525 ALDH1B1P30837 517 aa10.51□□□□□ -0.73
CDK5RAP3-208ENST00000578525 CASQ1P31415 396 aa10.51□□□□□ -0.73
CDK5RAP3-208ENST00000578525 PDE6BP35913 854 aa10.51□□□□□ -0.73
CDK5RAP3-208ENST00000578525 CCT6AP40227 531 aaKnown RBP10.51□□□□□ -0.73
CDK5RAP3-208ENST00000578525 ZNF543Q08ER8 600 aa10.51□□□□□ -0.73
CDK5RAP3-208ENST00000578525 ELF2Q15723 593 aa10.51□□□□□ -0.73
CDK5RAP3-208ENST00000578525 JAKMIP3Q5VZ66 844 aa10.51□□□□□ -0.73
CDK5RAP3-208ENST00000578525 HHIPL2Q6UWX4 724 aa10.51□□□□□ -0.73
CDK5RAP3-208ENST00000578525 LRRC47Q8N1G4 583 aaKnown RBP10.51□□□□□ -0.73
CDK5RAP3-208ENST00000578525 TBCKQ8TEA7 893 aa10.51□□□□□ -0.73
CDK5RAP3-208ENST00000578525 UBE2Q2Q8WVN8 375 aa10.51□□□□□ -0.73
CDK5RAP3-208ENST00000578525 DHTKD1Q96HY7 919 aaPredicted RBP10.51□□□□□ -0.73
CDK5RAP3-208ENST00000578525 FEZ1Q99689 392 aa10.51□□□□□ -0.73
CDK5RAP3-208ENST00000578525 ARID3AQ99856 593 aa10.51□□□□□ -0.73
CDK5RAP3-208ENST00000578525 C7orf25Q9BPX7 421 aa10.51□□□□□ -0.73
CDK5RAP3-208ENST00000578525 THAP9Q9H5L6 903 aa10.51□□□□□ -0.73
CDK5RAP3-208ENST00000578525 BIN2Q9UBW5 565 aaPredicted RBP10.51□□□□□ -0.73
CDK5RAP3-208ENST00000578525 ADAMTSL1Q8N6G6 1762 aa10.51□□□□□ -0.73
CDK5RAP3-208ENST00000578525 SOWAHDA6NJG2 315 aa10.5□□□□□ -0.73
CDK5RAP3-208ENST00000578525 F8W031 263 aaPredicted RBP10.5□□□□□ -0.73
CDK5RAP3-208ENST00000578525 COBLO75128 1261 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms