RNA–Protein interactions for RNA: ENST00000578402.5

LIMD2-205, Transcript of LIM domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD2, Length 1,534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-205ENST00000578402 TRAF1Q13077 416 aa26.17■■□□□ 1.78
LIMD2-205ENST00000578402 IKQ13123 557 aaPredicted RBP26.17■■□□□ 1.78
LIMD2-205ENST00000578402 NOL9Q5SY16 702 aaKnown RBP26.17■■□□□ 1.78
LIMD2-205ENST00000578402 REXO1Q8N1G1 1221 aaKnown RBP26.17■■□□□ 1.78
LIMD2-205ENST00000578402 KRI1Q8N9T8 703 aaKnown RBP26.17■■□□□ 1.78
LIMD2-205ENST00000578402 FSIP1Q8NA03 581 aa26.17■■□□□ 1.78
LIMD2-205ENST00000578402 COA7Q96BR5 231 aa26.17■■□□□ 1.78
LIMD2-205ENST00000578402 KLRG1Q96E93 195 aa26.17■■□□□ 1.78
LIMD2-205ENST00000578402 AS3MTQ9HBK9 375 aa26.17■■□□□ 1.78
LIMD2-205ENST00000578402 RIC8AQ9NPQ8 531 aa26.17■■□□□ 1.78
LIMD2-205ENST00000578402 DACT1Q9NYF0 836 aa26.17■■□□□ 1.78
LIMD2-205ENST00000578402 PTPREP23469 700 aa26.16■■□□□ 1.78
LIMD2-205ENST00000578402 MARCKSP29966 332 aaPredicted RBP26.16■■□□□ 1.78
LIMD2-205ENST00000578402 EPHX2P34913 555 aa26.16■■□□□ 1.78
LIMD2-205ENST00000578402 C1QTNF8P60827 252 aa26.16■■□□□ 1.78
LIMD2-205ENST00000578402 NOM1Q5C9Z4 860 aaKnown RBP26.16■■□□□ 1.78
LIMD2-205ENST00000578402 FAM83BQ5T0W9 1011 aa26.16■■□□□ 1.78
LIMD2-205ENST00000578402 TEX2Q8IWB9 1127 aa26.16■■□□□ 1.78
LIMD2-205ENST00000578402 AMNQ9BXJ7 453 aa26.16■■□□□ 1.78
LIMD2-205ENST00000578402 GLIS2Q9BZE0 524 aaPredicted RBP26.16■■□□□ 1.78
LIMD2-205ENST00000578402 PICK1Q9NRD5 415 aa26.16■■□□□ 1.78
LIMD2-205ENST00000578402 FEM1BQ9UK73 627 aa26.16■■□□□ 1.78
LIMD2-205ENST00000578402 PRR12Q9ULL5 1215 aa26.16■■□□□ 1.78
LIMD2-205ENST00000578402 FSD2A1L4K1 749 aa26.15■■□□□ 1.78
LIMD2-205ENST00000578402 IQCA1LA6NCM1 817 aa26.15■■□□□ 1.78
LIMD2-205ENST00000578402 WDR46O15213 610 aaKnown RBP26.15■■□□□ 1.78
LIMD2-205ENST00000578402 USP14P54578 494 aa26.15■■□□□ 1.78
LIMD2-205ENST00000578402 PRAMEF18Q5VWM3 479 aa26.15■■□□□ 1.78
LIMD2-205ENST00000578402 ZNF579Q8NAF0 562 aaKnown RBP26.15■■□□□ 1.78
LIMD2-205ENST00000578402 ENGASEQ8NFI3 743 aa26.15■■□□□ 1.78
LIMD2-205ENST00000578402 NUP62CLQ9H1M0 184 aa26.15■■□□□ 1.78
LIMD2-205ENST00000578402 POLR2AP24928 1970 aaKnown RBP26.15■■□□□ 1.78
LIMD2-205ENST00000578402 FAM237AA0A1B0GTK4 181 aa26.14■■□□□ 1.78
LIMD2-205ENST00000578402 NR1I2O75469 434 aa26.14■■□□□ 1.78
LIMD2-205ENST00000578402 ATP2B1P20020 1258 aa26.14■■□□□ 1.78
LIMD2-205ENST00000578402 MRPL12P52815 198 aaKnown RBP26.14■■□□□ 1.78
LIMD2-205ENST00000578402 NONOQ15233 471 aaKnown RBP eCLIP26.14■■□□□ 1.78
LIMD2-205ENST00000578402 LRSAM1Q6UWE0 723 aa26.14■■□□□ 1.78
LIMD2-205ENST00000578402 RASGRP4Q8TDF6 673 aa26.14■■□□□ 1.78
LIMD2-205ENST00000578402 CUL5Q93034 780 aa26.14■■□□□ 1.78
LIMD2-205ENST00000578402 GOLPH3LQ9H4A5 285 aa26.14■■□□□ 1.78
LIMD2-205ENST00000578402 CLSTN2Q9H4D0 955 aa26.14■■□□□ 1.78
LIMD2-205ENST00000578402 FBXO2Q9UK22 296 aaPredicted RBP26.14■■□□□ 1.78
LIMD2-205ENST00000578402 SRPRBQ9Y5M8 271 aaKnown RBP26.14■■□□□ 1.78
LIMD2-205ENST00000578402 SYCE3A1L190 88 aa26.14■■□□□ 1.77
LIMD2-205ENST00000578402 SNW1Q13573 536 aaKnown RBP26.14■■□□□ 1.77
LIMD2-205ENST00000578402 CCDC84Q86UT8 332 aaPredicted RBP26.14■■□□□ 1.77
LIMD2-205ENST00000578402 PCDHA1Q9Y5I3 950 aa26.14■■□□□ 1.77
LIMD2-205ENST00000578402 WDR90Q96KV7 1748 aa26.13■■□□□ 1.77
LIMD2-205ENST00000578402 GOLGA6L3A6NEY3 463 aa26.13■■□□□ 1.77
LIMD2-205ENST00000578402 PTPRAP18433 802 aa26.13■■□□□ 1.77
LIMD2-205ENST00000578402 ATP2C1P98194 919 aaPredicted RBP26.13■■□□□ 1.77
LIMD2-205ENST00000578402 ORC2Q13416 577 aaPredicted RBP26.13■■□□□ 1.77
LIMD2-205ENST00000578402 FBXO11Q86XK2 927 aa26.13■■□□□ 1.77
LIMD2-205ENST00000578402 DDX55Q8NHQ9 600 aaKnown RBP eCLIP26.13■■□□□ 1.77
LIMD2-205ENST00000578402 FERMT2Q96AC1 680 aa26.13■■□□□ 1.77
LIMD2-205ENST00000578402 CLK2P49760 499 aaKnown RBP26.12■■□□□ 1.77
LIMD2-205ENST00000578402 ZYXQ15942 572 aaKnown RBP26.12■■□□□ 1.77
LIMD2-205ENST00000578402 RESP18Q5W5W9 173 aa26.12■■□□□ 1.77
LIMD2-205ENST00000578402 FMR1NBQ8N0W7 255 aaPredicted RBP26.12■■□□□ 1.77
LIMD2-205ENST00000578402 RANBP17Q9H2T7 1088 aaKnown RBP26.12■■□□□ 1.77
LIMD2-205ENST00000578402 MCTP2Q6DN12 878 aa26.11■■□□□ 1.77
LIMD2-205ENST00000578402 KRT26Q7Z3Y9 468 aa26.11■■□□□ 1.77
LIMD2-205ENST00000578402 ZKSCAN4Q969J2 545 aaPredicted RBP26.11■■□□□ 1.77
LIMD2-205ENST00000578402 PSTPIP2Q9H939 334 aa26.11■■□□□ 1.77
LIMD2-205ENST00000578402 HPSEQ9Y251 543 aa26.11■■□□□ 1.77
LIMD2-205ENST00000578402 WNT7AO00755 349 aa26.1■■□□□ 1.77
LIMD2-205ENST00000578402 CTAGE5O15320 804 aa26.1■■□□□ 1.77
LIMD2-205ENST00000578402 KINO60870 393 aaKnown RBP26.1■■□□□ 1.77
LIMD2-205ENST00000578402 ZNF174Q15697 407 aa26.1■■□□□ 1.77
LIMD2-205ENST00000578402 INF2Q27J81 1249 aa26.1■■□□□ 1.77
LIMD2-205ENST00000578402 SHC4Q6S5L8 630 aa26.1■■□□□ 1.77
LIMD2-205ENST00000578402 RBM43Q6ZSC3 357 aaKnown RBP26.1■■□□□ 1.77
LIMD2-205ENST00000578402 ZNF280CQ8ND82 737 aa26.1■■□□□ 1.77
LIMD2-205ENST00000578402 TAF1DQ9H5J8 278 aaPredicted RBP26.1■■□□□ 1.77
LIMD2-205ENST00000578402 PAPPA2Q9BXP8 1791 aa26.1■■□□□ 1.77
LIMD2-205ENST00000578402 A0A1B0GVL5 298 aa26.09■■□□□ 1.77
LIMD2-205ENST00000578402 ADM5C9JUS6 153 aa26.09■■□□□ 1.77
LIMD2-205ENST00000578402 PPP1R12BO60237 982 aaPredicted RBP26.09■■□□□ 1.77
LIMD2-205ENST00000578402 USP2O75604 605 aaPredicted RBP26.09■■□□□ 1.77
LIMD2-205ENST00000578402 BACE1P56817 501 aa26.09■■□□□ 1.77
LIMD2-205ENST00000578402 MAP3K11Q16584 847 aa26.09■■□□□ 1.77
LIMD2-205ENST00000578402 ARL6IP4Q66PJ3 421 aaKnown RBP26.09■■□□□ 1.77
LIMD2-205ENST00000578402 NEK8Q86SG6 692 aa26.09■■□□□ 1.77
LIMD2-205ENST00000578402 PNMA8AQ86V59 439 aaPredicted RBP26.09■■□□□ 1.77
LIMD2-205ENST00000578402 C12orf42Q96LP6 360 aa26.09■■□□□ 1.77
LIMD2-205ENST00000578402 TNMDQ9H2S6 317 aa26.09■■□□□ 1.77
LIMD2-205ENST00000578402 BIN2Q9UBW5 565 aaPredicted RBP26.09■■□□□ 1.77
LIMD2-205ENST00000578402 PHIPQ8WWQ0 1821 aa26.09■■□□□ 1.77
LIMD2-205ENST00000578402 LAD1O00515 517 aa26.09■■□□□ 1.77
LIMD2-205ENST00000578402 PFKFB1P16118 471 aa26.09■■□□□ 1.77
LIMD2-205ENST00000578402 NDUFA8P51970 172 aa26.09■■□□□ 1.77
LIMD2-205ENST00000578402 PTGDRQ13258 359 aa26.09■■□□□ 1.77
LIMD2-205ENST00000578402 MTMR2Q13614 643 aa26.09■■□□□ 1.77
LIMD2-205ENST00000578402 GAS2L3Q86XJ1 694 aa26.09■■□□□ 1.77
LIMD2-205ENST00000578402 C19orf81C9J6K1 198 aa26.08■■□□□ 1.77
LIMD2-205ENST00000578402 L1TD1Q5T7N2 865 aaKnown RBP26.08■■□□□ 1.77
LIMD2-205ENST00000578402 JAKMIP3Q5VZ66 844 aa26.08■■□□□ 1.77
LIMD2-205ENST00000578402 CLIC6Q96NY7 704 aa26.08■■□□□ 1.77
LIMD2-205ENST00000578402 MCM7P33993 719 aa26.07■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms