RNA–Protein interactions for RNA: ENST00000578367.1

LINC01543-201, Transcript of long intergenic non-protein coding RNA 1543, humanhuman

TSL 5 BASIC

Gene LINC01543, Length 900 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01543-201ENST00000578367 TRIM22Q8IYM9 498 aa16.07■□□□□ 0.16
LINC01543-201ENST00000578367 SAMD3Q8N6K7 520 aa16.07■□□□□ 0.16
LINC01543-201ENST00000578367 TMX3Q96JJ7 454 aa16.07■□□□□ 0.16
LINC01543-201ENST00000578367 SPATC1LQ9H0A9 340 aa16.07■□□□□ 0.16
LINC01543-201ENST00000578367 FBXO40Q9UH90 709 aa16.07■□□□□ 0.16
LINC01543-201ENST00000578367 ZNF214Q9UL59 606 aaPredicted RBP16.07■□□□□ 0.16
LINC01543-201ENST00000578367 STK36Q9NRP7 1315 aa16.06■□□□□ 0.16
LINC01543-201ENST00000578367 CNMDO75829 334 aa16.06■□□□□ 0.16
LINC01543-201ENST00000578367 PLEKHA8P1O95397 391 aa16.06■□□□□ 0.16
LINC01543-201ENST00000578367 MAPK4P31152 587 aa16.06■□□□□ 0.16
LINC01543-201ENST00000578367 TMEM132BQ14DG7 1078 aa16.06■□□□□ 0.16
LINC01543-201ENST00000578367 CDC37Q16543 378 aaPredicted RBP16.06■□□□□ 0.16
LINC01543-201ENST00000578367 CHST13Q8NET6 341 aa16.06■□□□□ 0.16
LINC01543-201ENST00000578367 AMNQ9BXJ7 453 aa16.06■□□□□ 0.16
LINC01543-201ENST00000578367 MROH8Q9H579 483 aa16.06■□□□□ 0.16
LINC01543-201ENST00000578367 ZNF536O15090 1300 aa16.05■□□□□ 0.16
LINC01543-201ENST00000578367 CNTNAP5Q8WYK1 1306 aa16.05■□□□□ 0.16
LINC01543-201ENST00000578367 K7ELQ4 463 aaPredicted RBP16.05■□□□□ 0.16
LINC01543-201ENST00000578367 FMNL1O95466 1100 aaPredicted RBP16.05■□□□□ 0.16
LINC01543-201ENST00000578367 HMGN5P82970 282 aaKnown RBP16.05■□□□□ 0.16
LINC01543-201ENST00000578367 SSRP1Q08945 709 aaKnown RBP16.05■□□□□ 0.16
LINC01543-201ENST00000578367 STK3Q13188 491 aa16.05■□□□□ 0.16
LINC01543-201ENST00000578367 QRICH1Q2TAL8 776 aa16.05■□□□□ 0.16
LINC01543-201ENST00000578367 NBPF11Q86T75 865 aa16.05■□□□□ 0.16
LINC01543-201ENST00000578367 FBXO11Q86XK2 927 aa16.05■□□□□ 0.16
LINC01543-201ENST00000578367 RAB11FIP4Q86YS3 637 aa16.05■□□□□ 0.16
LINC01543-201ENST00000578367 HSCBQ8IWL3 235 aa16.05■□□□□ 0.16
LINC01543-201ENST00000578367 ANKRD13CQ8N6S4 541 aa16.05■□□□□ 0.16
LINC01543-201ENST00000578367 RGS22Q8NE09 1264 aa16.05■□□□□ 0.16
LINC01543-201ENST00000578367 WASF1Q92558 559 aa16.05■□□□□ 0.16
LINC01543-201ENST00000578367 BTBD7Q9P203 1132 aa16.05■□□□□ 0.16
LINC01543-201ENST00000578367 ABCB11O95342 1321 aa16.04■□□□□ 0.16
LINC01543-201ENST00000578367 STRNO43815 780 aa16.04■□□□□ 0.16
LINC01543-201ENST00000578367 DEXIO95424 95 aa16.04■□□□□ 0.16
LINC01543-201ENST00000578367 GNRH1P01148 92 aa16.04■□□□□ 0.16
LINC01543-201ENST00000578367 SP3Q02447 781 aa16.04■□□□□ 0.16
LINC01543-201ENST00000578367 CUL4AQ13619 759 aa16.04■□□□□ 0.16
LINC01543-201ENST00000578367 SLC35G1Q2M3R5 365 aa16.04■□□□□ 0.16
LINC01543-201ENST00000578367 PPP1R18Q6NYC8 613 aa16.04■□□□□ 0.16
LINC01543-201ENST00000578367 POTEEQ6S8J3 1075 aa16.04■□□□□ 0.16
LINC01543-201ENST00000578367 ABRAQ8N0Z2 381 aa16.04■□□□□ 0.16
LINC01543-201ENST00000578367 INTS4Q96HW7 963 aaKnown RBP16.04■□□□□ 0.16
LINC01543-201ENST00000578367 PIGSQ96S52 555 aa16.04■□□□□ 0.16
LINC01543-201ENST00000578367 LARP6Q9BRS8 491 aaKnown RBP16.04■□□□□ 0.16
LINC01543-201ENST00000578367 PAGR1Q9BTK6 254 aa16.04■□□□□ 0.16
LINC01543-201ENST00000578367 GLT8D2Q9H1C3 349 aa16.04■□□□□ 0.16
LINC01543-201ENST00000578367 NCOA5Q9HCD5 579 aaKnown RBP16.04■□□□□ 0.16
LINC01543-201ENST00000578367 VAT1LQ9HCJ6 419 aa16.04■□□□□ 0.16
LINC01543-201ENST00000578367 TXNRD2Q9NNW7 524 aa16.04■□□□□ 0.16
LINC01543-201ENST00000578367 MAP3K20Q9NYL2 800 aaKnown RBP16.04■□□□□ 0.16
LINC01543-201ENST00000578367 MRPL11Q9Y3B7 192 aaKnown RBP16.04■□□□□ 0.16
LINC01543-201ENST00000578367 KIF3AQ9Y496 699 aa16.04■□□□□ 0.16
LINC01543-201ENST00000578367 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.04■□□□□ 0.16
LINC01543-201ENST00000578367 V9GY48 417 aaPredicted RBP16.04■□□□□ 0.16
LINC01543-201ENST00000578367 GPR25O00155 361 aa16.03■□□□□ 0.16
LINC01543-201ENST00000578367 CD2BP2O95400 341 aaKnown RBP16.03■□□□□ 0.16
LINC01543-201ENST00000578367 LARGE1O95461 756 aa16.03■□□□□ 0.16
LINC01543-201ENST00000578367 TBC1D8O95759 1140 aa16.03■□□□□ 0.16
LINC01543-201ENST00000578367 KIF22Q14807 665 aa16.03■□□□□ 0.16
LINC01543-201ENST00000578367 PFKFB3Q16875 520 aaPredicted RBP16.03■□□□□ 0.16
LINC01543-201ENST00000578367 SNRNP48Q6IEG0 339 aaKnown RBP16.03■□□□□ 0.16
LINC01543-201ENST00000578367 NOL8Q76FK4 1167 aaKnown RBP16.03■□□□□ 0.16
LINC01543-201ENST00000578367 CCAR1Q8IX12 1150 aaKnown RBP16.03■□□□□ 0.16
LINC01543-201ENST00000578367 SMARCC2Q8TAQ2 1214 aa16.03■□□□□ 0.16
LINC01543-201ENST00000578367 CCDC12Q8WUD4 166 aaPredicted RBP16.03■□□□□ 0.16
LINC01543-201ENST00000578367 MOV10L1Q9BXT6 1211 aaKnown RBP16.03■□□□□ 0.16
LINC01543-201ENST00000578367 RAVER2Q9HCJ3 691 aaKnown RBP16.03■□□□□ 0.16
LINC01543-201ENST00000578367 SH3GLB2Q9NR46 395 aa16.03■□□□□ 0.16
LINC01543-201ENST00000578367 CPA4Q9UI42 421 aa16.03■□□□□ 0.16
LINC01543-201ENST00000578367 CCPG1Q9ULG6 757 aa16.03■□□□□ 0.16
LINC01543-201ENST00000578367 FKTNO75072 461 aa16.02■□□□□ 0.16
LINC01543-201ENST00000578367 SCG2P13521 617 aa16.02■□□□□ 0.16
LINC01543-201ENST00000578367 XBP1P17861 261 aa16.02■□□□□ 0.16
LINC01543-201ENST00000578367 BECN1Q14457 450 aa16.02■□□□□ 0.16
LINC01543-201ENST00000578367 Q3C1V9 767 aa16.02■□□□□ 0.16
LINC01543-201ENST00000578367 SAMD1Q6SPF0 538 aaPredicted RBP16.02■□□□□ 0.16
LINC01543-201ENST00000578367 HOMER1Q86YM7 354 aa16.02■□□□□ 0.16
LINC01543-201ENST00000578367 MCF2L2Q86YR7 1114 aa16.02■□□□□ 0.16
LINC01543-201ENST00000578367 NECAB1Q8N987 351 aa16.02■□□□□ 0.16
LINC01543-201ENST00000578367 NSUN7Q8NE18 718 aaKnown RBP16.02■□□□□ 0.16
LINC01543-201ENST00000578367 ERO1AQ96HE7 468 aa16.02■□□□□ 0.16
LINC01543-201ENST00000578367 CPVLQ9H3G5 476 aa16.02■□□□□ 0.16
LINC01543-201ENST00000578367 ACAD9Q9H845 621 aa16.02■□□□□ 0.16
LINC01543-201ENST00000578367 PCDHA1Q9Y5I3 950 aa16.02■□□□□ 0.16
LINC01543-201ENST00000578367 FCGRTP55899 365 aa16.01■□□□□ 0.15
LINC01543-201ENST00000578367 LACTBP83111 547 aaPredicted RBP16.01■□□□□ 0.15
LINC01543-201ENST00000578367 GHRHRQ02643 423 aa16.01■□□□□ 0.15
LINC01543-201ENST00000578367 PLS1Q14651 629 aa16.01■□□□□ 0.15
LINC01543-201ENST00000578367 CCDC174Q6PII3 467 aa16.01■□□□□ 0.15
LINC01543-201ENST00000578367 CCDC83Q8IWF9 413 aa16.01■□□□□ 0.15
LINC01543-201ENST00000578367 CPXCR1Q8N123 301 aa16.01■□□□□ 0.15
LINC01543-201ENST00000578367 CCDC82Q8N4S0 544 aa16.01■□□□□ 0.15
LINC01543-201ENST00000578367 AGBL1Q96MI9 1066 aa16.01■□□□□ 0.15
LINC01543-201ENST00000578367 SLC26A6Q9BXS9 759 aa16.01■□□□□ 0.15
LINC01543-201ENST00000578367 BARHL2Q9NY43 387 aa16.01■□□□□ 0.15
LINC01543-201ENST00000578367 A0A0G2JMZ2 1700 aa16■□□□□ 0.15
LINC01543-201ENST00000578367 RLFQ13129 1914 aa16■□□□□ 0.15
LINC01543-201ENST00000578367 ESYT2A0FGR8 921 aa16■□□□□ 0.15
LINC01543-201ENST00000578367 PTPDC1A2A3K4 754 aa16■□□□□ 0.15
LINC01543-201ENST00000578367 CTDNEP1O95476 244 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms