RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 CCDC69A6NI79 296 aa9.35□□□□□ -0.91
COPS3-215ENST00000578317 MPHOSPH10O00566 681 aaKnown RBP9.35□□□□□ -0.91
COPS3-215ENST00000578317 NMT2O60551 498 aa9.35□□□□□ -0.91
COPS3-215ENST00000578317 CALM1P0DP23 149 aa9.35□□□□□ -0.91
COPS3-215ENST00000578317 CALM2P0DP24 149 aa9.35□□□□□ -0.91
COPS3-215ENST00000578317 CALM3P0DP25 149 aa9.35□□□□□ -0.91
COPS3-215ENST00000578317 TROAPQ12815 778 aa9.35□□□□□ -0.91
COPS3-215ENST00000578317 NR1H3Q13133 447 aa9.35□□□□□ -0.91
COPS3-215ENST00000578317 ME3Q16798 604 aa9.35□□□□□ -0.91
COPS3-215ENST00000578317 APOA5Q6Q788 366 aa9.35□□□□□ -0.91
COPS3-215ENST00000578317 SYNE3Q6ZMZ3 975 aa9.35□□□□□ -0.91
COPS3-215ENST00000578317 INTS4Q96HW7 963 aaKnown RBP9.35□□□□□ -0.91
COPS3-215ENST00000578317 TMEM47Q9BQJ4 181 aa9.35□□□□□ -0.91
COPS3-215ENST00000578317 HCSTQ9UBK5 93 aa9.35□□□□□ -0.91
COPS3-215ENST00000578317 BRPF3Q9ULD4 1205 aa9.35□□□□□ -0.91
COPS3-215ENST00000578317 ZBTB21Q9ULJ3 1066 aa9.35□□□□□ -0.91
COPS3-215ENST00000578317 FOCADQ5VW36 1801 aa9.35□□□□□ -0.91
COPS3-215ENST00000578317 KLF18A0A0U1RQI7 1052 aa9.34□□□□□ -0.91
COPS3-215ENST00000578317 ZBTB43O43298 467 aa9.34□□□□□ -0.91
COPS3-215ENST00000578317 PFKFB2O60825 505 aa9.34□□□□□ -0.91
COPS3-215ENST00000578317 DDAH1O94760 285 aa9.34□□□□□ -0.91
COPS3-215ENST00000578317 GDF11O95390 407 aa9.34□□□□□ -0.91
COPS3-215ENST00000578317 IREB2P48200 963 aaKnown RBP9.34□□□□□ -0.91
COPS3-215ENST00000578317 APOBRQ0VD83 1088 aa9.34□□□□□ -0.91
COPS3-215ENST00000578317 SEPT2Q15019 361 aa9.34□□□□□ -0.91
COPS3-215ENST00000578317 LDLRAD1Q5T700 205 aa9.34□□□□□ -0.91
COPS3-215ENST00000578317 DLK2Q6UY11 383 aa9.34□□□□□ -0.91
COPS3-215ENST00000578317 CATIPQ7Z7H3 387 aa9.34□□□□□ -0.91
COPS3-215ENST00000578317 SCYL3Q8IZE3 742 aa9.34□□□□□ -0.91
COPS3-215ENST00000578317 WRNIP1Q96S55 665 aa9.34□□□□□ -0.91
COPS3-215ENST00000578317 SPSB2Q99619 263 aa9.34□□□□□ -0.91
COPS3-215ENST00000578317 WDR18Q9BV38 432 aa9.34□□□□□ -0.91
COPS3-215ENST00000578317 KAT14Q9H8E8 782 aa9.34□□□□□ -0.91
COPS3-215ENST00000578317 IL21Q9HBE4 155 aa9.34□□□□□ -0.91
COPS3-215ENST00000578317 SENP2Q9HC62 589 aa9.34□□□□□ -0.91
COPS3-215ENST00000578317 PRDM9Q9NQV7 894 aa9.34□□□□□ -0.91
COPS3-215ENST00000578317 CLIP2Q9UDT6 1046 aa9.34□□□□□ -0.91
COPS3-215ENST00000578317 STX8Q9UNK0 236 aa9.34□□□□□ -0.91
COPS3-215ENST00000578317 TMX2Q9Y320 296 aa9.34□□□□□ -0.91
COPS3-215ENST00000578317 CCDC196A0A1B0GTZ2 297 aa9.34□□□□□ -0.91
COPS3-215ENST00000578317 SSC5DA1L4H1 1573 aa9.34□□□□□ -0.91
COPS3-215ENST00000578317 DHX16O60231 1041 aaKnown RBP9.34□□□□□ -0.91
COPS3-215ENST00000578317 ATG7O95352 703 aa9.34□□□□□ -0.91
COPS3-215ENST00000578317 SNHG28P0DPA3 235 aa9.34□□□□□ -0.91
COPS3-215ENST00000578317 EEF2P13639 858 aaKnown RBP9.34□□□□□ -0.91
COPS3-215ENST00000578317 INPP5BP32019 993 aa9.34□□□□□ -0.91
COPS3-215ENST00000578317 RAB3GAP1Q15042 981 aa9.34□□□□□ -0.91
COPS3-215ENST00000578317 NFXL1Q6ZNB6 911 aa9.34□□□□□ -0.91
COPS3-215ENST00000578317 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.34□□□□□ -0.91
COPS3-215ENST00000578317 ARMC9Q7Z3E5 817 aa9.34□□□□□ -0.91
COPS3-215ENST00000578317 ANKRD13AQ8IZ07 590 aa9.34□□□□□ -0.91
COPS3-215ENST00000578317 ZNF654Q8IZM8 581 aa9.34□□□□□ -0.91
COPS3-215ENST00000578317 FANCBQ8NB91 859 aa9.34□□□□□ -0.91
COPS3-215ENST00000578317 GMCL1P1Q8NEA9 526 aa9.34□□□□□ -0.91
COPS3-215ENST00000578317 IPO9Q96P70 1041 aaKnown RBP9.34□□□□□ -0.91
COPS3-215ENST00000578317 SLKQ9H2G2 1235 aaPredicted RBP9.34□□□□□ -0.91
COPS3-215ENST00000578317 NID2Q14112 1375 aa9.33□□□□□ -0.92
COPS3-215ENST00000578317 BAZ2AQ9UIF9 1905 aaKnown RBP9.33□□□□□ -0.92
COPS3-215ENST00000578317 USP17L5A8MUK1 530 aa9.33□□□□□ -0.92
COPS3-215ENST00000578317 TRAF5O00463 557 aa9.33□□□□□ -0.92
COPS3-215ENST00000578317 ATP9BO43861 1147 aa9.33□□□□□ -0.92
COPS3-215ENST00000578317 PTPRAP18433 802 aa9.33□□□□□ -0.92
COPS3-215ENST00000578317 SMARCA1P28370 1054 aa9.33□□□□□ -0.92
COPS3-215ENST00000578317 ICA1Q05084 483 aa9.33□□□□□ -0.92
COPS3-215ENST00000578317 SHROOM1Q2M3G4 852 aaPredicted RBP9.33□□□□□ -0.92
COPS3-215ENST00000578317 MSS51Q4VC12 460 aa9.33□□□□□ -0.92
COPS3-215ENST00000578317 GTF3C6Q969F1 213 aa9.33□□□□□ -0.92
COPS3-215ENST00000578317 ZKSCAN4Q969J2 545 aaPredicted RBP9.33□□□□□ -0.92
COPS3-215ENST00000578317 LLPHQ9BRT6 129 aaKnown RBP9.33□□□□□ -0.92
COPS3-215ENST00000578317 SH2D4AQ9H788 454 aa9.33□□□□□ -0.92
COPS3-215ENST00000578317 ARHGEF10LQ9HCE6 1279 aa9.33□□□□□ -0.92
COPS3-215ENST00000578317 PICK1Q9NRD5 415 aa9.33□□□□□ -0.92
COPS3-215ENST00000578317 NAV1Q8NEY1 1877 aa9.33□□□□□ -0.92
COPS3-215ENST00000578317 LAMA4Q16363 1823 aa9.32□□□□□ -0.92
COPS3-215ENST00000578317 ECM29Q5VYK3 1845 aa9.32□□□□□ -0.92
COPS3-215ENST00000578317 A0A1W2PRG0 241 aa9.32□□□□□ -0.92
COPS3-215ENST00000578317 ZBBXA8MT70 800 aa9.32□□□□□ -0.92
COPS3-215ENST00000578317 F5H6K3 240 aa9.32□□□□□ -0.92
COPS3-215ENST00000578317 TOMM70O94826 608 aa9.32□□□□□ -0.92
COPS3-215ENST00000578317 ADH1BP00325 375 aa9.32□□□□□ -0.92
COPS3-215ENST00000578317 KIF5BP33176 963 aa9.32□□□□□ -0.92
COPS3-215ENST00000578317 GNAQP50148 359 aa9.32□□□□□ -0.92
COPS3-215ENST00000578317 KLRC3Q07444 240 aa9.32□□□□□ -0.92
COPS3-215ENST00000578317 SCRN1Q12765 414 aa9.32□□□□□ -0.92
COPS3-215ENST00000578317 C2orf69Q8N8R5 385 aa9.32□□□□□ -0.92
COPS3-215ENST00000578317 SMC1BQ8NDV3 1235 aa9.32□□□□□ -0.92
COPS3-215ENST00000578317 GMCL1Q96IK5 515 aa9.32□□□□□ -0.92
COPS3-215ENST00000578317 KIAA1683Q9H0B3 1180 aa9.32□□□□□ -0.92
COPS3-215ENST00000578317 RBM28Q9NW13 759 aaKnown RBP9.32□□□□□ -0.92
COPS3-215ENST00000578317 FKBPLQ9UIM3 349 aa9.32□□□□□ -0.92
COPS3-215ENST00000578317 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.32□□□□□ -0.92
COPS3-215ENST00000578317 CSADQ9Y600 493 aa9.32□□□□□ -0.92
COPS3-215ENST00000578317 CDK5RAP2Q96SN8 1893 aa9.32□□□□□ -0.92
COPS3-215ENST00000578317 MYH1P12882 1939 aa9.32□□□□□ -0.92
COPS3-215ENST00000578317 GOLGA8BA8MQT2 603 aa9.31□□□□□ -0.92
COPS3-215ENST00000578317 C19orf81C9J6K1 198 aa9.31□□□□□ -0.92
COPS3-215ENST00000578317 LARGE1O95461 756 aa9.31□□□□□ -0.92
COPS3-215ENST00000578317 FBXO45P0C2W1 286 aa9.31□□□□□ -0.92
COPS3-215ENST00000578317 PDHBP11177 359 aa9.31□□□□□ -0.92
COPS3-215ENST00000578317 ADD1P35611 737 aaKnown RBP9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms