RNA–Protein interactions for RNA: ENST00000578199.5

ERBB2-205, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best) BASIC

Gene ERBB2, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-205ENST00000578199 JAKMIP3Q5VZ66 844 aa19.81■□□□□ 0.76
ERBB2-205ENST00000578199 FBXO38Q6PIJ6 1188 aa19.81■□□□□ 0.76
ERBB2-205ENST00000578199 RAD9BQ6WBX8 426 aa19.81■□□□□ 0.76
ERBB2-205ENST00000578199 RRP36Q96EU6 259 aaKnown RBP19.81■□□□□ 0.76
ERBB2-205ENST00000578199 EEF2KMTQ96G04 330 aa19.81■□□□□ 0.76
ERBB2-205ENST00000578199 FAM163AQ96GL9 167 aaPredicted RBP19.81■□□□□ 0.76
ERBB2-205ENST00000578199 MRPL44Q9H9J2 332 aaKnown RBP19.81■□□□□ 0.76
ERBB2-205ENST00000578199 RNF225M0QZC1 329 aaPredicted RBP19.81■□□□□ 0.76
ERBB2-205ENST00000578199 PLCG2P16885 1265 aa19.81■□□□□ 0.76
ERBB2-205ENST00000578199 HOXA10P31260 410 aaPredicted RBP19.81■□□□□ 0.76
ERBB2-205ENST00000578199 DOK7Q18PE1 504 aa19.81■□□□□ 0.76
ERBB2-205ENST00000578199 FILIP1LQ4L180 1135 aa19.81■□□□□ 0.76
ERBB2-205ENST00000578199 CERS5Q8N5B7 392 aa19.81■□□□□ 0.76
ERBB2-205ENST00000578199 CTAGE1Q96RT6 745 aa19.81■□□□□ 0.76
ERBB2-205ENST00000578199 DDX4Q9NQI0 724 aaKnown RBP19.81■□□□□ 0.76
ERBB2-205ENST00000578199 GAKO14976 1311 aa19.81■□□□□ 0.76
ERBB2-205ENST00000578199 GYPCP04921 128 aa19.8■□□□□ 0.76
ERBB2-205ENST00000578199 SCNN1DP51172 638 aa19.8■□□□□ 0.76
ERBB2-205ENST00000578199 TXNRD1Q16881 649 aa19.8■□□□□ 0.76
ERBB2-205ENST00000578199 PYM1Q9BRP8 204 aaKnown RBP19.8■□□□□ 0.76
ERBB2-205ENST00000578199 PRDM4Q9UKN5 801 aa19.8■□□□□ 0.76
ERBB2-205ENST00000578199 PPEF1O14829 653 aaPredicted RBP19.8■□□□□ 0.76
ERBB2-205ENST00000578199 GALNT17Q6IS24 598 aa19.8■□□□□ 0.76
ERBB2-205ENST00000578199 COA7Q96BR5 231 aa19.8■□□□□ 0.76
ERBB2-205ENST00000578199 LZTS2Q9BRK4 669 aa19.8■□□□□ 0.76
ERBB2-205ENST00000578199 LZTFL1Q9NQ48 299 aa19.8■□□□□ 0.76
ERBB2-205ENST00000578199 SEC63Q9UGP8 760 aaKnown RBP19.8■□□□□ 0.76
ERBB2-205ENST00000578199 PARP3Q9Y6F1 533 aa19.8■□□□□ 0.76
ERBB2-205ENST00000578199 KCNJ18B7U540 433 aa19.79■□□□□ 0.76
ERBB2-205ENST00000578199 IGSF3O75054 1194 aa19.79■□□□□ 0.76
ERBB2-205ENST00000578199 AKR1B1P15121 316 aa19.79■□□□□ 0.76
ERBB2-205ENST00000578199 TECP42680 631 aa19.79■□□□□ 0.76
ERBB2-205ENST00000578199 KCNJ12Q14500 433 aa19.79■□□□□ 0.76
ERBB2-205ENST00000578199 TCP11X2Q5H9J9 407 aa19.79■□□□□ 0.76
ERBB2-205ENST00000578199 PROM2Q8N271 834 aa19.79■□□□□ 0.76
ERBB2-205ENST00000578199 TRPC5Q9UL62 973 aaPredicted RBP19.79■□□□□ 0.76
ERBB2-205ENST00000578199 NT5C2P49902 561 aa19.79■□□□□ 0.76
ERBB2-205ENST00000578199 NONOQ15233 471 aaKnown RBP eCLIP19.79■□□□□ 0.76
ERBB2-205ENST00000578199 TBCKQ8TEA7 893 aa19.79■□□□□ 0.76
ERBB2-205ENST00000578199 TBC1D22AQ8WUA7 517 aa19.79■□□□□ 0.76
ERBB2-205ENST00000578199 PANX2Q96RD6 677 aa19.79■□□□□ 0.76
ERBB2-205ENST00000578199 CRAMP1Q96RY5 1269 aa19.79■□□□□ 0.76
ERBB2-205ENST00000578199 C6orf50Q9HD87 102 aa19.79■□□□□ 0.76
ERBB2-205ENST00000578199 RMND1Q9NWS8 449 aa19.79■□□□□ 0.76
ERBB2-205ENST00000578199 KLRC4O43908 158 aa19.78■□□□□ 0.76
ERBB2-205ENST00000578199 MFAP3LO75121 409 aa19.78■□□□□ 0.76
ERBB2-205ENST00000578199 TUBB4AP04350 444 aa19.78■□□□□ 0.76
ERBB2-205ENST00000578199 PDHBP11177 359 aa19.78■□□□□ 0.76
ERBB2-205ENST00000578199 PLCG1P19174 1290 aa19.78■□□□□ 0.76
ERBB2-205ENST00000578199 COPB1P53618 953 aaKnown RBP19.78■□□□□ 0.76
ERBB2-205ENST00000578199 DPP8Q6V1X1 898 aaPredicted RBP19.78■□□□□ 0.76
ERBB2-205ENST00000578199 SLF2Q8IX21 1173 aa19.78■□□□□ 0.76
ERBB2-205ENST00000578199 CARD6Q9BX69 1037 aa19.78■□□□□ 0.76
ERBB2-205ENST00000578199 QTRT2Q9H974 415 aaKnown RBP19.78■□□□□ 0.76
ERBB2-205ENST00000578199 GPCPD1Q9NPB8 672 aa19.78■□□□□ 0.76
ERBB2-205ENST00000578199 LIMA1Q9UHB6 759 aaKnown RBP19.78■□□□□ 0.76
ERBB2-205ENST00000578199 HSPA1LP34931 641 aa19.78■□□□□ 0.76
ERBB2-205ENST00000578199 SOGA3Q5TF21 947 aa19.78■□□□□ 0.76
ERBB2-205ENST00000578199 CABP7Q86V35 215 aa19.78■□□□□ 0.76
ERBB2-205ENST00000578199 IRF2BP1Q8IU81 584 aa19.78■□□□□ 0.76
ERBB2-205ENST00000578199 CERS3Q8IU89 383 aa19.78■□□□□ 0.76
ERBB2-205ENST00000578199 OR52Z1P0C646 297 aa19.77■□□□□ 0.76
ERBB2-205ENST00000578199 CASQ1P31415 396 aa19.77■□□□□ 0.76
ERBB2-205ENST00000578199 ADSSL1Q8N142 457 aa19.77■□□□□ 0.76
ERBB2-205ENST00000578199 ZNF397Q8NF99 534 aaPredicted RBP19.77■□□□□ 0.76
ERBB2-205ENST00000578199 KBTBD4Q9NVX7 518 aa19.77■□□□□ 0.76
ERBB2-205ENST00000578199 MTMR4Q9NYA4 1195 aa19.77■□□□□ 0.76
ERBB2-205ENST00000578199 TTF2Q9UNY4 1162 aaKnown RBP19.77■□□□□ 0.76
ERBB2-205ENST00000578199 MYH8P13535 1937 aa19.77■□□□□ 0.76
ERBB2-205ENST00000578199 LRRC10BA6NIK2 292 aa19.77■□□□□ 0.76
ERBB2-205ENST00000578199 KRT25Q7Z3Z0 450 aa19.77■□□□□ 0.76
ERBB2-205ENST00000578199 NEK8Q86SG6 692 aa19.77■□□□□ 0.76
ERBB2-205ENST00000578199 POTEDQ86YR6 584 aa19.77■□□□□ 0.76
ERBB2-205ENST00000578199 CCSER1Q9C0I3 900 aa19.77■□□□□ 0.76
ERBB2-205ENST00000578199 GNA11P29992 359 aa19.76■□□□□ 0.75
ERBB2-205ENST00000578199 SP8Q8IXZ3 490 aa19.76■□□□□ 0.75
ERBB2-205ENST00000578199 EPC1Q9H2F5 836 aa19.76■□□□□ 0.75
ERBB2-205ENST00000578199 ADGRG1Q9Y653 693 aa19.76■□□□□ 0.75
ERBB2-205ENST00000578199 TXKP42681 527 aa19.76■□□□□ 0.75
ERBB2-205ENST00000578199 CCDC12Q8WUD4 166 aaPredicted RBP19.76■□□□□ 0.75
ERBB2-205ENST00000578199 ZC3H12CQ9C0D7 883 aaKnown RBP19.76■□□□□ 0.75
ERBB2-205ENST00000578199 KCNQ5Q9NR82 932 aa19.76■□□□□ 0.75
ERBB2-205ENST00000578199 USP40Q9NVE5 1235 aa19.76■□□□□ 0.75
ERBB2-205ENST00000578199 PES1O00541 588 aaKnown RBP19.75■□□□□ 0.75
ERBB2-205ENST00000578199 ABL1P00519 1130 aa19.75■□□□□ 0.75
ERBB2-205ENST00000578199 CCDC175P0C221 793 aa19.75■□□□□ 0.75
ERBB2-205ENST00000578199 SLC27A3Q5K4L6 730 aa19.75■□□□□ 0.75
ERBB2-205ENST00000578199 HPS3Q969F9 1004 aa19.75■□□□□ 0.75
ERBB2-205ENST00000578199 NUP88Q99567 741 aaPredicted RBP19.75■□□□□ 0.75
ERBB2-205ENST00000578199 KLRG2A4D1S0 409 aaPredicted RBP19.75■□□□□ 0.75
ERBB2-205ENST00000578199 PRPHP41219 470 aa19.75■□□□□ 0.75
ERBB2-205ENST00000578199 UBXN1Q04323 297 aa19.75■□□□□ 0.75
ERBB2-205ENST00000578199 GABPAQ06546 454 aa19.75■□□□□ 0.75
ERBB2-205ENST00000578199 ARHGAP29Q52LW3 1261 aa19.75■□□□□ 0.75
ERBB2-205ENST00000578199 REXO1Q8N1G1 1221 aaKnown RBP19.75■□□□□ 0.75
ERBB2-205ENST00000578199 SRRTQ9BXP5 876 aaKnown RBP19.75■□□□□ 0.75
ERBB2-205ENST00000578199 RIOX1Q9H6W3 641 aa19.75■□□□□ 0.75
ERBB2-205ENST00000578199 ATP6V0A2Q9Y487 856 aa19.75■□□□□ 0.75
ERBB2-205ENST00000578199 LAD1O00515 517 aa19.74■□□□□ 0.75
ERBB2-205ENST00000578199 NOVP48745 357 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms