RNA–Protein interactions for RNA: ENST00000577943.2

RN7SL560P-201, Transcript of RNA, 7SL, cytoplasmic 560, pseudogene, humanhuman

BASIC

Gene RN7SL560P, Length 264 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL560P-201ENST00000577943 HSPD1P10809 573 aaKnown RBP17.66■□□□□ 0.42
RN7SL560P-201ENST00000577943 NMIQ13287 307 aaPredicted RBP17.66■□□□□ 0.42
RN7SL560P-201ENST00000577943 SNX17Q15036 470 aa17.66■□□□□ 0.42
RN7SL560P-201ENST00000577943 RRP12Q5JTH9 1297 aaKnown RBP17.66■□□□□ 0.42
RN7SL560P-201ENST00000577943 RCSD1Q6JBY9 416 aa17.66■□□□□ 0.42
RN7SL560P-201ENST00000577943 GPR153Q6NV75 609 aa17.66■□□□□ 0.42
RN7SL560P-201ENST00000577943 SMC5Q8IY18 1101 aa17.66■□□□□ 0.42
RN7SL560P-201ENST00000577943 AGBL1Q96MI9 1066 aa17.66■□□□□ 0.42
RN7SL560P-201ENST00000577943 PLA2G6O60733 806 aa17.65■□□□□ 0.42
RN7SL560P-201ENST00000577943 ACVR2BQ13705 512 aa17.65■□□□□ 0.42
RN7SL560P-201ENST00000577943 CCDC96Q2M329 555 aa17.65■□□□□ 0.42
RN7SL560P-201ENST00000577943 C1orf53Q5VUE5 145 aa17.65■□□□□ 0.42
RN7SL560P-201ENST00000577943 CCDC174Q6PII3 467 aa17.65■□□□□ 0.42
RN7SL560P-201ENST00000577943 ZNF589Q86UQ0 364 aaPredicted RBP17.65■□□□□ 0.42
RN7SL560P-201ENST00000577943 ABHD16BQ9H3Z7 469 aa17.65■□□□□ 0.42
RN7SL560P-201ENST00000577943 RNF146Q9NTX7 359 aa17.65■□□□□ 0.42
RN7SL560P-201ENST00000577943 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.65■□□□□ 0.42
RN7SL560P-201ENST00000577943 LAMA2P24043 3122 aaKnown RBP17.65■□□□□ 0.42
RN7SL560P-201ENST00000577943 COL6A3P12111 3177 aa17.65■□□□□ 0.42
RN7SL560P-201ENST00000577943 A0A1W2PQ45 241 aaPredicted RBP17.64■□□□□ 0.41
RN7SL560P-201ENST00000577943 A0A1W2PQY0 241 aa17.64■□□□□ 0.41
RN7SL560P-201ENST00000577943 ADAMTS4O75173 837 aa17.64■□□□□ 0.41
RN7SL560P-201ENST00000577943 FGRP09769 529 aa17.64■□□□□ 0.41
RN7SL560P-201ENST00000577943 ALAS1P13196 640 aa17.64■□□□□ 0.41
RN7SL560P-201ENST00000577943 SNAP25P60880 206 aa17.64■□□□□ 0.41
RN7SL560P-201ENST00000577943 TKFCQ3LXA3 575 aa17.64■□□□□ 0.41
RN7SL560P-201ENST00000577943 ARMCX2Q7L311 632 aa17.64■□□□□ 0.41
RN7SL560P-201ENST00000577943 RASGRP2Q7LDG7 609 aa17.64■□□□□ 0.41
RN7SL560P-201ENST00000577943 CHD1LQ86WJ1 897 aa17.64■□□□□ 0.41
RN7SL560P-201ENST00000577943 FGD4Q96M96 766 aa17.64■□□□□ 0.41
RN7SL560P-201ENST00000577943 TRERF1Q96PN7 1200 aa17.64■□□□□ 0.41
RN7SL560P-201ENST00000577943 TSEN34Q9BSV6 310 aaKnown RBP17.64■□□□□ 0.41
RN7SL560P-201ENST00000577943 PDLIM7Q9NR12 457 aa17.64■□□□□ 0.41
RN7SL560P-201ENST00000577943 ZNF536O15090 1300 aa17.64■□□□□ 0.41
RN7SL560P-201ENST00000577943 CCDC171Q6TFL3 1326 aa17.64■□□□□ 0.41
RN7SL560P-201ENST00000577943 SYNRGQ9UMZ2 1314 aa17.64■□□□□ 0.41
RN7SL560P-201ENST00000577943 LCTP09848 1927 aa17.63■□□□□ 0.41
RN7SL560P-201ENST00000577943 POTEB2H3BUK9 544 aa17.63■□□□□ 0.41
RN7SL560P-201ENST00000577943 DUSP11O75319 330 aaKnown RBP17.63■□□□□ 0.41
RN7SL560P-201ENST00000577943 IGHDP01880 384 aa17.63■□□□□ 0.41
RN7SL560P-201ENST00000577943 NOVP48745 357 aa17.63■□□□□ 0.41
RN7SL560P-201ENST00000577943 MFAP1P55081 439 aaKnown RBP17.63■□□□□ 0.41
RN7SL560P-201ENST00000577943 HAND2P61296 217 aa17.63■□□□□ 0.41
RN7SL560P-201ENST00000577943 CNTN2Q02246 1040 aa17.63■□□□□ 0.41
RN7SL560P-201ENST00000577943 TLE2Q04725 743 aa17.63■□□□□ 0.41
RN7SL560P-201ENST00000577943 PLEKHM2Q8IWE5 1019 aa17.63■□□□□ 0.41
RN7SL560P-201ENST00000577943 DEFB123Q8N688 67 aa17.63■□□□□ 0.41
RN7SL560P-201ENST00000577943 EXOC6Q8TAG9 804 aa17.63■□□□□ 0.41
RN7SL560P-201ENST00000577943 DCAF4Q8WV16 495 aa17.63■□□□□ 0.41
RN7SL560P-201ENST00000577943 A1CFQ9NQ94 594 aaKnown RBP17.63■□□□□ 0.41
RN7SL560P-201ENST00000577943 PRR12Q9ULL5 1215 aa17.63■□□□□ 0.41
RN7SL560P-201ENST00000577943 ZMYM6O95789 1325 aa17.63■□□□□ 0.41
RN7SL560P-201ENST00000577943 LAMA4Q16363 1823 aa17.63■□□□□ 0.41
RN7SL560P-201ENST00000577943 MYH6P13533 1939 aa17.62■□□□□ 0.41
RN7SL560P-201ENST00000577943 SDSP20132 328 aa17.62■□□□□ 0.41
RN7SL560P-201ENST00000577943 NUCB1Q02818 461 aa17.62■□□□□ 0.41
RN7SL560P-201ENST00000577943 CCDC144BQ3MJ40 725 aa17.62■□□□□ 0.41
RN7SL560P-201ENST00000577943 Q7L0L9 218 aa17.62■□□□□ 0.41
RN7SL560P-201ENST00000577943 SH3RF1Q7Z6J0 888 aa17.62■□□□□ 0.41
RN7SL560P-201ENST00000577943 CCDC144CPQ8IYA2 1237 aa17.62■□□□□ 0.41
RN7SL560P-201ENST00000577943 NUP133Q8WUM0 1156 aa17.62■□□□□ 0.41
RN7SL560P-201ENST00000577943 BADQ92934 168 aa17.62■□□□□ 0.41
RN7SL560P-201ENST00000577943 SPC25Q9HBM1 224 aa17.62■□□□□ 0.41
RN7SL560P-201ENST00000577943 STARD7Q9NQZ5 370 aa17.62■□□□□ 0.41
RN7SL560P-201ENST00000577943 TCP11L1Q9NUJ3 509 aa17.62■□□□□ 0.41
RN7SL560P-201ENST00000577943 TRIM43BA6NCK2 446 aa17.61■□□□□ 0.41
RN7SL560P-201ENST00000577943 MOXD2PA6NHM9 499 aa17.61■□□□□ 0.41
RN7SL560P-201ENST00000577943 CLTBP09497 229 aa17.61■□□□□ 0.41
RN7SL560P-201ENST00000577943 C6orf222P0C671 652 aaPredicted RBP17.61■□□□□ 0.41
RN7SL560P-201ENST00000577943 TOP1P11387 765 aaKnown RBP17.61■□□□□ 0.41
RN7SL560P-201ENST00000577943 ACLYP53396 1101 aa17.61■□□□□ 0.41
RN7SL560P-201ENST00000577943 KCNA10Q16322 511 aa17.61■□□□□ 0.41
RN7SL560P-201ENST00000577943 AKNAD1Q5T1N1 836 aa17.61■□□□□ 0.41
RN7SL560P-201ENST00000577943 MFSD6Q6ZSS7 791 aa17.61■□□□□ 0.41
RN7SL560P-201ENST00000577943 FAM133AQ8N9E0 248 aa17.61■□□□□ 0.41
RN7SL560P-201ENST00000577943 KLHDC9Q8NEP7 349 aa17.61■□□□□ 0.41
RN7SL560P-201ENST00000577943 TRIM43Q96BQ3 446 aaPredicted RBP17.61■□□□□ 0.41
RN7SL560P-201ENST00000577943 TMEM47Q9BQJ4 181 aa17.61■□□□□ 0.41
RN7SL560P-201ENST00000577943 OSBPL3Q9H4L5 887 aa17.61■□□□□ 0.41
RN7SL560P-201ENST00000577943 CCPG1Q9ULG6 757 aa17.61■□□□□ 0.41
RN7SL560P-201ENST00000577943 MYADML2A6NDP7 307 aa17.6■□□□□ 0.41
RN7SL560P-201ENST00000577943 ASB14A6NK59 587 aa17.6■□□□□ 0.41
RN7SL560P-201ENST00000577943 PQBP1O60828 265 aaKnown RBP17.6■□□□□ 0.41
RN7SL560P-201ENST00000577943 PCP11498 1178 aaKnown RBP17.6■□□□□ 0.41
RN7SL560P-201ENST00000577943 SLC16A2P36021 539 aa17.6■□□□□ 0.41
RN7SL560P-201ENST00000577943 MUM1L1Q5H9M0 696 aa17.6■□□□□ 0.41
RN7SL560P-201ENST00000577943 TTBK2Q6IQ55 1244 aa17.6■□□□□ 0.41
RN7SL560P-201ENST00000577943 LRRC37A2A6NM11 1700 aa17.59■□□□□ 0.41
RN7SL560P-201ENST00000577943 FRMPD2Q68DX3 1309 aaPredicted RBP17.59■□□□□ 0.41
RN7SL560P-201ENST00000577943 SOWAHBA6NEL2 793 aa17.59■□□□□ 0.41
RN7SL560P-201ENST00000577943 ADCY6O43306 1168 aa17.59■□□□□ 0.41
RN7SL560P-201ENST00000577943 ICAM1P05362 532 aa17.59■□□□□ 0.41
RN7SL560P-201ENST00000577943 CST5P28325 142 aaPredicted RBP17.59■□□□□ 0.41
RN7SL560P-201ENST00000577943 SHHQ15465 462 aa17.59■□□□□ 0.41
RN7SL560P-201ENST00000577943 SYDE2Q5VT97 1194 aa17.59■□□□□ 0.41
RN7SL560P-201ENST00000577943 CCSAPQ6IQ19 270 aaPredicted RBP17.59■□□□□ 0.41
RN7SL560P-201ENST00000577943 CWC27Q6UX04 472 aaKnown RBP17.59■□□□□ 0.41
RN7SL560P-201ENST00000577943 NSMFQ6X4W1 530 aa17.59■□□□□ 0.41
RN7SL560P-201ENST00000577943 NOL8Q76FK4 1167 aaKnown RBP17.59■□□□□ 0.41
RN7SL560P-201ENST00000577943 PCSK9Q8NBP7 692 aaKnown RBP17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms