RNA–Protein interactions for RNA: ENST00000577498.1

IFT20-204, Transcript of intraflagellar transport 20, humanhuman

TSL 4

Gene IFT20, Length 557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-204ENST00000577498 COA7Q96BR5 231 aa17.34■□□□□ 0.37
IFT20-204ENST00000577498 CDCA5Q96FF9 252 aa17.34■□□□□ 0.37
IFT20-204ENST00000577498 AMNQ9BXJ7 453 aa17.34■□□□□ 0.37
IFT20-204ENST00000577498 RIC8AQ9NPQ8 531 aa17.34■□□□□ 0.37
IFT20-204ENST00000577498 PRR12Q9ULL5 1215 aa17.34■□□□□ 0.37
IFT20-204ENST00000577498 ME1P48163 572 aa17.33■□□□□ 0.36
IFT20-204ENST00000577498 IREB2P48200 963 aaKnown RBP17.33■□□□□ 0.36
IFT20-204ENST00000577498 MRPL12P52815 198 aaKnown RBP17.33■□□□□ 0.36
IFT20-204ENST00000577498 ZYXQ15942 572 aaKnown RBP17.33■□□□□ 0.36
IFT20-204ENST00000577498 ADALQ6DHV7 355 aa17.33■□□□□ 0.36
IFT20-204ENST00000577498 CAVIN1Q6NZI2 390 aaKnown RBP17.33■□□□□ 0.36
IFT20-204ENST00000577498 PIK3AP1Q6ZUJ8 805 aa17.33■□□□□ 0.36
IFT20-204ENST00000577498 REXO1Q8N1G1 1221 aaKnown RBP17.33■□□□□ 0.36
IFT20-204ENST00000577498 C12orf42Q96LP6 360 aa17.33■□□□□ 0.36
IFT20-204ENST00000577498 PCDHA7Q9UN72 937 aa17.33■□□□□ 0.36
IFT20-204ENST00000577498 PAPPA2Q9BXP8 1791 aa17.33■□□□□ 0.36
IFT20-204ENST00000577498 BACE1P56817 501 aa17.32■□□□□ 0.36
IFT20-204ENST00000577498 SPP2Q13103 211 aa17.32■□□□□ 0.36
IFT20-204ENST00000577498 MTMR2Q13614 643 aa17.32■□□□□ 0.36
IFT20-204ENST00000577498 EAPPQ56P03 285 aaPredicted RBP17.32■□□□□ 0.36
IFT20-204ENST00000577498 EARS2Q5JPH6 523 aaKnown RBP17.32■□□□□ 0.36
IFT20-204ENST00000577498 TTC38Q5R3I4 469 aa17.32■□□□□ 0.36
IFT20-204ENST00000577498 MCTP2Q6DN12 878 aa17.32■□□□□ 0.36
IFT20-204ENST00000577498 FBXO11Q86XK2 927 aa17.32■□□□□ 0.36
IFT20-204ENST00000577498 CUL5Q93034 780 aa17.32■□□□□ 0.36
IFT20-204ENST00000577498 RANBP17Q9H2T7 1088 aaKnown RBP17.32■□□□□ 0.36
IFT20-204ENST00000577498 EMILIN3Q9NT22 766 aa17.32■□□□□ 0.36
IFT20-204ENST00000577498 PCDHB6Q9Y5E3 794 aa17.32■□□□□ 0.36
IFT20-204ENST00000577498 PCDHA1Q9Y5I3 950 aa17.32■□□□□ 0.36
IFT20-204ENST00000577498 CSADQ9Y600 493 aa17.32■□□□□ 0.36
IFT20-204ENST00000577498 FAM205CA6NFA0 338 aa17.31■□□□□ 0.36
IFT20-204ENST00000577498 DCAF8L1A6NGE4 600 aa17.31■□□□□ 0.36
IFT20-204ENST00000577498 NONOQ15233 471 aaKnown RBP eCLIP17.31■□□□□ 0.36
IFT20-204ENST00000577498 MAP3K11Q16584 847 aa17.31■□□□□ 0.36
IFT20-204ENST00000577498 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.31■□□□□ 0.36
IFT20-204ENST00000577498 RBM46Q8TBY0 533 aaKnown RBP17.31■□□□□ 0.36
IFT20-204ENST00000577498 SNCAIPQ9Y6H5 919 aa17.31■□□□□ 0.36
IFT20-204ENST00000577498 ZHX2Q9Y6X8 837 aa17.31■□□□□ 0.36
IFT20-204ENST00000577498 PHIPQ8WWQ0 1821 aa17.31■□□□□ 0.36
IFT20-204ENST00000577498 ADAMTS3O15072 1205 aa17.3■□□□□ 0.36
IFT20-204ENST00000577498 CUTAO60888 179 aa17.3■□□□□ 0.36
IFT20-204ENST00000577498 FDX1P10109 184 aa17.3■□□□□ 0.36
IFT20-204ENST00000577498 ORC2Q13416 577 aaPredicted RBP17.3■□□□□ 0.36
IFT20-204ENST00000577498 VGLL4Q14135 290 aa17.3■□□□□ 0.36
IFT20-204ENST00000577498 AXDND1Q5T1B0 1012 aaPredicted RBP17.3■□□□□ 0.36
IFT20-204ENST00000577498 CCDC183Q5T5S1 534 aa17.3■□□□□ 0.36
IFT20-204ENST00000577498 PRPF38AQ8NAV1 312 aaKnown RBP17.3■□□□□ 0.36
IFT20-204ENST00000577498 RASGRP4Q8TDF6 673 aa17.3■□□□□ 0.36
IFT20-204ENST00000577498 SLF1Q9BQI6 1058 aa17.3■□□□□ 0.36
IFT20-204ENST00000577498 GZF1Q9H116 711 aaPredicted RBP17.3■□□□□ 0.36
IFT20-204ENST00000577498 PSTPIP2Q9H939 334 aa17.3■□□□□ 0.36
IFT20-204ENST00000577498 TMEM63CQ9P1W3 806 aa17.3■□□□□ 0.36
IFT20-204ENST00000577498 PNMA2Q9UL42 364 aa17.3■□□□□ 0.36
IFT20-204ENST00000577498 AFG3L2Q9Y4W6 797 aa17.3■□□□□ 0.36
IFT20-204ENST00000577498 UNCXA6NJT0 531 aa17.29■□□□□ 0.36
IFT20-204ENST00000577498 LETM1O95202 739 aaPredicted RBP17.29■□□□□ 0.36
IFT20-204ENST00000577498 VCAM1P19320 739 aa17.29■□□□□ 0.36
IFT20-204ENST00000577498 PTPREP23469 700 aa17.29■□□□□ 0.36
IFT20-204ENST00000577498 CMA1P23946 247 aa17.29■□□□□ 0.36
IFT20-204ENST00000577498 CLK2P49760 499 aaKnown RBP17.29■□□□□ 0.36
IFT20-204ENST00000577498 PRKG1Q13976 671 aa17.29■□□□□ 0.36
IFT20-204ENST00000577498 NOM1Q5C9Z4 860 aaKnown RBP17.29■□□□□ 0.36
IFT20-204ENST00000577498 SH3D19Q5HYK7 790 aa17.29■□□□□ 0.36
IFT20-204ENST00000577498 CCDC73Q6ZRK6 1079 aa17.29■□□□□ 0.36
IFT20-204ENST00000577498 CCAR1Q8IX12 1150 aaKnown RBP17.29■□□□□ 0.36
IFT20-204ENST00000577498 ANKRD13AQ8IZ07 590 aa17.29■□□□□ 0.36
IFT20-204ENST00000577498 KRI1Q8N9T8 703 aaKnown RBP17.29■□□□□ 0.36
IFT20-204ENST00000577498 MRPS27Q92552 414 aaKnown RBP17.29■□□□□ 0.36
IFT20-204ENST00000577498 KIFC2Q96AC6 838 aa17.29■□□□□ 0.36
IFT20-204ENST00000577498 DDX19AQ9NUU7 478 aaKnown RBP17.29■□□□□ 0.36
IFT20-204ENST00000577498 FZD1Q9UP38 647 aa17.29■□□□□ 0.36
IFT20-204ENST00000577498 LIG1P18858 919 aa17.28■□□□□ 0.36
IFT20-204ENST00000577498 ATP2B1P20020 1258 aa17.28■□□□□ 0.36
IFT20-204ENST00000577498 ZSCAN23Q3MJ62 389 aa17.28■□□□□ 0.36
IFT20-204ENST00000577498 ARMC9Q7Z3E5 817 aa17.28■□□□□ 0.36
IFT20-204ENST00000577498 ZNF579Q8NAF0 562 aaKnown RBP17.28■□□□□ 0.36
IFT20-204ENST00000577498 FERMT2Q96AC1 680 aa17.28■□□□□ 0.36
IFT20-204ENST00000577498 RPAP3Q9H6T3 665 aaPredicted RBP17.28■□□□□ 0.36
IFT20-204ENST00000577498 TMOD4Q9NZQ9 345 aa17.28■□□□□ 0.36
IFT20-204ENST00000577498 ABCB11O95342 1321 aa17.27■□□□□ 0.36
IFT20-204ENST00000577498 MARCKSP29966 332 aaPredicted RBP17.27■□□□□ 0.36
IFT20-204ENST00000577498 ZNF445P59923 1031 aa17.27■□□□□ 0.36
IFT20-204ENST00000577498 ATP2C1P98194 919 aaPredicted RBP17.27■□□□□ 0.36
IFT20-204ENST00000577498 FAM160A1Q05DH4 1040 aa17.27■□□□□ 0.36
IFT20-204ENST00000577498 PPATQ06203 517 aa17.27■□□□□ 0.36
IFT20-204ENST00000577498 AP3B2Q13367 1082 aa17.27■□□□□ 0.36
IFT20-204ENST00000577498 GSE1Q14687 1217 aa17.27■□□□□ 0.36
IFT20-204ENST00000577498 INF2Q27J81 1249 aa17.27■□□□□ 0.36
IFT20-204ENST00000577498 DLK2Q6UY11 383 aa17.27■□□□□ 0.36
IFT20-204ENST00000577498 FSIP1Q8NA03 581 aa17.27■□□□□ 0.36
IFT20-204ENST00000577498 TANGO6Q9C0B7 1094 aa17.27■□□□□ 0.36
IFT20-204ENST00000577498 FBXO28Q9NVF7 368 aa17.27■□□□□ 0.36
IFT20-204ENST00000577498 BIN2Q9UBW5 565 aaPredicted RBP17.27■□□□□ 0.36
IFT20-204ENST00000577498 FBXO2Q9UK22 296 aaPredicted RBP17.27■□□□□ 0.36
IFT20-204ENST00000577498 PPP1R9AQ9ULJ8 1098 aa17.27■□□□□ 0.36
IFT20-204ENST00000577498 CLEC11AQ9Y240 323 aa17.27■□□□□ 0.36
IFT20-204ENST00000577498 SRPRBQ9Y5M8 271 aaKnown RBP17.27■□□□□ 0.36
IFT20-204ENST00000577498 OTOFQ9HC10 1997 aa17.27■□□□□ 0.36
IFT20-204ENST00000577498 FAM237AA0A1B0GTK4 181 aa17.26■□□□□ 0.35
IFT20-204ENST00000577498 LAD1O00515 517 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms