RNA–Protein interactions for RNA: ENST00000577396.5

SUPT4H1-202, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

TSL 2 BASIC

Gene SUPT4H1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-202ENST00000577396 RIOX1Q9H6W3 641 aa23.3■■□□□ 1.32
SUPT4H1-202ENST00000577396 SRRDQ9UH36 339 aa23.3■■□□□ 1.32
SUPT4H1-202ENST00000577396 RCAN1P53805 252 aa23.3■■□□□ 1.32
SUPT4H1-202ENST00000577396 SNRNP48Q6IEG0 339 aaKnown RBP23.3■■□□□ 1.32
SUPT4H1-202ENST00000577396 SYNE3Q6ZMZ3 975 aa23.3■■□□□ 1.32
SUPT4H1-202ENST00000577396 PLEKHH3Q7Z736 793 aa23.3■■□□□ 1.32
SUPT4H1-202ENST00000577396 MICU3Q86XE3 530 aa23.3■■□□□ 1.32
SUPT4H1-202ENST00000577396 CTDP1Q9Y5B0 961 aaPredicted RBP23.3■■□□□ 1.32
SUPT4H1-202ENST00000577396 ZBTB43O43298 467 aa23.29■■□□□ 1.32
SUPT4H1-202ENST00000577396 ICAM1P05362 532 aa23.29■■□□□ 1.32
SUPT4H1-202ENST00000577396 HOXD10P28358 340 aa23.29■■□□□ 1.32
SUPT4H1-202ENST00000577396 SMARCA1P28370 1054 aa23.29■■□□□ 1.32
SUPT4H1-202ENST00000577396 KIF5BP33176 963 aa23.29■■□□□ 1.32
SUPT4H1-202ENST00000577396 CCDC174Q6PII3 467 aa23.29■■□□□ 1.32
SUPT4H1-202ENST00000577396 CCDC144CPQ8IYA2 1237 aa23.29■■□□□ 1.32
SUPT4H1-202ENST00000577396 COA7Q96BR5 231 aa23.29■■□□□ 1.32
SUPT4H1-202ENST00000577396 VAT1LQ9HCJ6 419 aa23.29■■□□□ 1.32
SUPT4H1-202ENST00000577396 FAM217BQ9NTX9 383 aaPredicted RBP23.29■■□□□ 1.32
SUPT4H1-202ENST00000577396 GABRQQ9UN88 632 aa23.29■■□□□ 1.32
SUPT4H1-202ENST00000577396 HPS5Q9UPZ3 1129 aa23.29■■□□□ 1.32
SUPT4H1-202ENST00000577396 PTPN22Q9Y2R2 807 aa23.29■■□□□ 1.32
SUPT4H1-202ENST00000577396 PKN2Q16513 984 aaKnown RBP23.28■■□□□ 1.32
SUPT4H1-202ENST00000577396 NCAPG2Q86XI2 1143 aa23.28■■□□□ 1.32
SUPT4H1-202ENST00000577396 CCAR1Q8IX12 1150 aaKnown RBP23.28■■□□□ 1.32
SUPT4H1-202ENST00000577396 SRBD1Q8N5C6 995 aaKnown RBP23.28■■□□□ 1.32
SUPT4H1-202ENST00000577396 USP6NLQ92738 828 aa23.28■■□□□ 1.32
SUPT4H1-202ENST00000577396 BAZ2BQ9UIF8 2168 aaKnown RBP23.28■■□□□ 1.32
SUPT4H1-202ENST00000577396 SMCHD1A6NHR9 2005 aa23.27■■□□□ 1.32
SUPT4H1-202ENST00000577396 PTPREP23469 700 aa23.27■■□□□ 1.32
SUPT4H1-202ENST00000577396 PRMT2P55345 433 aa23.27■■□□□ 1.32
SUPT4H1-202ENST00000577396 PRKCZQ05513 592 aa23.27■■□□□ 1.32
SUPT4H1-202ENST00000577396 MORN1Q5T089 497 aa23.27■■□□□ 1.32
SUPT4H1-202ENST00000577396 UPF2Q9HAU5 1272 aaKnown RBP23.27■■□□□ 1.32
SUPT4H1-202ENST00000577396 STRNO43815 780 aa23.26■■□□□ 1.31
SUPT4H1-202ENST00000577396 PLEKHA8P1O95397 391 aa23.26■■□□□ 1.31
SUPT4H1-202ENST00000577396 PDIA3P30101 505 aaKnown RBP23.26■■□□□ 1.31
SUPT4H1-202ENST00000577396 COPB2P35606 906 aa23.26■■□□□ 1.31
SUPT4H1-202ENST00000577396 FLT3LGP49771 235 aa23.26■■□□□ 1.31
SUPT4H1-202ENST00000577396 GNAQP50148 359 aa23.26■■□□□ 1.31
SUPT4H1-202ENST00000577396 CDC37Q16543 378 aaPredicted RBP23.26■■□□□ 1.31
SUPT4H1-202ENST00000577396 TBC1D32Q96NH3 1257 aa23.26■■□□□ 1.31
SUPT4H1-202ENST00000577396 LZTS2Q9BRK4 669 aa23.26■■□□□ 1.31
SUPT4H1-202ENST00000577396 LARP6Q9BRS8 491 aaKnown RBP23.26■■□□□ 1.31
SUPT4H1-202ENST00000577396 CDC27P30260 824 aa23.26■■□□□ 1.31
SUPT4H1-202ENST00000577396 NEK4P51957 841 aa23.26■■□□□ 1.31
SUPT4H1-202ENST00000577396 GRB14Q14449 540 aa23.26■■□□□ 1.31
SUPT4H1-202ENST00000577396 QRICH1Q2TAL8 776 aa23.26■■□□□ 1.31
SUPT4H1-202ENST00000577396 WDR78Q5VTH9 848 aa23.26■■□□□ 1.31
SUPT4H1-202ENST00000577396 TMTC3Q6ZXV5 915 aa23.26■■□□□ 1.31
SUPT4H1-202ENST00000577396 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.26■■□□□ 1.31
SUPT4H1-202ENST00000577396 SPZ1Q9BXG8 430 aa23.26■■□□□ 1.31
SUPT4H1-202ENST00000577396 SLC15A5A6NIM6 579 aa23.25■■□□□ 1.31
SUPT4H1-202ENST00000577396 SLC4A3P48751 1232 aa23.25■■□□□ 1.31
SUPT4H1-202ENST00000577396 FUT2Q10981 343 aa23.25■■□□□ 1.31
SUPT4H1-202ENST00000577396 PPP2R5BQ15173 497 aa23.25■■□□□ 1.31
SUPT4H1-202ENST00000577396 TKFCQ3LXA3 575 aa23.25■■□□□ 1.31
SUPT4H1-202ENST00000577396 ABRAQ8N0Z2 381 aa23.25■■□□□ 1.31
SUPT4H1-202ENST00000577396 CMTR1Q8N1G2 835 aaKnown RBP23.25■■□□□ 1.31
SUPT4H1-202ENST00000577396 CHST13Q8NET6 341 aa23.25■■□□□ 1.31
SUPT4H1-202ENST00000577396 ZNF274Q96GC6 653 aaPredicted RBP23.25■■□□□ 1.31
SUPT4H1-202ENST00000577396 CCPG1Q9ULG6 757 aa23.25■■□□□ 1.31
SUPT4H1-202ENST00000577396 NID2Q14112 1375 aa23.25■■□□□ 1.31
SUPT4H1-202ENST00000577396 PLXNB2O15031 1838 aa23.24■■□□□ 1.31
SUPT4H1-202ENST00000577396 DHX16O60231 1041 aaKnown RBP23.24■■□□□ 1.31
SUPT4H1-202ENST00000577396 TAL1P17542 331 aaPredicted RBP23.24■■□□□ 1.31
SUPT4H1-202ENST00000577396 ADD1P35611 737 aaKnown RBP23.24■■□□□ 1.31
SUPT4H1-202ENST00000577396 AK2P54819 239 aa23.24■■□□□ 1.31
SUPT4H1-202ENST00000577396 IRF5Q13568 498 aa23.24■■□□□ 1.31
SUPT4H1-202ENST00000577396 RTN1Q16799 776 aa23.24■■□□□ 1.31
SUPT4H1-202ENST00000577396 FBXO46Q6PJ61 603 aaPredicted RBP23.24■■□□□ 1.31
SUPT4H1-202ENST00000577396 PIGSQ96S52 555 aa23.24■■□□□ 1.31
SUPT4H1-202ENST00000577396 NUDT12Q9BQG2 462 aa23.24■■□□□ 1.31
SUPT4H1-202ENST00000577396 MCOLN1Q9GZU1 580 aa23.24■■□□□ 1.31
SUPT4H1-202ENST00000577396 RBM28Q9NW13 759 aaKnown RBP23.24■■□□□ 1.31
SUPT4H1-202ENST00000577396 GOLGA8AA7E2F4 631 aa23.23■■□□□ 1.31
SUPT4H1-202ENST00000577396 GOLGA8BA8MQT2 603 aa23.23■■□□□ 1.31
SUPT4H1-202ENST00000577396 ZBTB5O15062 677 aa23.23■■□□□ 1.31
SUPT4H1-202ENST00000577396 PPP1R11O60927 126 aaPredicted RBP23.23■■□□□ 1.31
SUPT4H1-202ENST00000577396 SOCS4Q8WXH5 440 aa23.23■■□□□ 1.31
SUPT4H1-202ENST00000577396 TRERF1Q96PN7 1200 aa23.23■■□□□ 1.31
SUPT4H1-202ENST00000577396 PNMA2Q9UL42 364 aa23.23■■□□□ 1.31
SUPT4H1-202ENST00000577396 PTCH2Q9Y6C5 1203 aa23.23■■□□□ 1.31
SUPT4H1-202ENST00000577396 IVNS1ABPQ9Y6Y0 642 aa23.23■■□□□ 1.31
SUPT4H1-202ENST00000577396 FCER1AP12319 257 aa23.22■■□□□ 1.31
SUPT4H1-202ENST00000577396 ALAS1P13196 640 aa23.22■■□□□ 1.31
SUPT4H1-202ENST00000577396 METAP2P50579 478 aaKnown RBP eCLIP23.22■■□□□ 1.31
SUPT4H1-202ENST00000577396 MAP2K5Q13163 448 aa23.22■■□□□ 1.31
SUPT4H1-202ENST00000577396 MUM1L1Q5H9M0 696 aa23.22■■□□□ 1.31
SUPT4H1-202ENST00000577396 RNF146Q9NTX7 359 aa23.22■■□□□ 1.31
SUPT4H1-202ENST00000577396 FBXO40Q9UH90 709 aa23.22■■□□□ 1.31
SUPT4H1-202ENST00000577396 NAP1L2Q9ULW6 460 aaPredicted RBP23.22■■□□□ 1.31
SUPT4H1-202ENST00000577396 HOXC6P09630 235 aa23.22■■□□□ 1.31
SUPT4H1-202ENST00000577396 XRCC5P13010 732 aaKnown RBP23.22■■□□□ 1.31
SUPT4H1-202ENST00000577396 ADORA2AP29274 412 aa23.22■■□□□ 1.31
SUPT4H1-202ENST00000577396 ANKRD1Q15327 319 aa23.22■■□□□ 1.31
SUPT4H1-202ENST00000577396 CCDC82Q8N4S0 544 aa23.22■■□□□ 1.31
SUPT4H1-202ENST00000577396 CLEC4DQ8WXI8 215 aa23.22■■□□□ 1.31
SUPT4H1-202ENST00000577396 CWC22Q9HCG8 908 aaKnown RBP23.22■■□□□ 1.31
SUPT4H1-202ENST00000577396 HOMER2Q9NSB8 354 aa23.22■■□□□ 1.31
SUPT4H1-202ENST00000577396 TPCN1Q9ULQ1 816 aa23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms