RNA–Protein interactions for RNA: ENST00000577300.1

SMCHD1-202, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 506 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-202ENST00000577300 SRRTQ9BXP5 876 aaKnown RBP8.24□□□□□ -1.09
SMCHD1-202ENST00000577300 INHBBP09529 407 aa8.23□□□□□ -1.09
SMCHD1-202ENST00000577300 PRKCAP17252 672 aa8.23□□□□□ -1.09
SMCHD1-202ENST00000577300 SDHBP21912 280 aa8.23□□□□□ -1.09
SMCHD1-202ENST00000577300 COL9A2Q14055 689 aaPredicted RBP8.23□□□□□ -1.09
SMCHD1-202ENST00000577300 SSPNQ14714 243 aa8.23□□□□□ -1.09
SMCHD1-202ENST00000577300 AXDND1Q5T1B0 1012 aaPredicted RBP8.23□□□□□ -1.09
SMCHD1-202ENST00000577300 TDRD10Q5VZ19 366 aaKnown RBP8.23□□□□□ -1.09
SMCHD1-202ENST00000577300 UNC5AQ6ZN44 842 aa8.23□□□□□ -1.09
SMCHD1-202ENST00000577300 SLC12A9Q9BXP2 914 aa8.23□□□□□ -1.09
SMCHD1-202ENST00000577300 CNTD2Q9H8S5 307 aa8.23□□□□□ -1.09
SMCHD1-202ENST00000577300 PPT2Q9UMR5 302 aa8.23□□□□□ -1.09
SMCHD1-202ENST00000577300 N4BP3O15049 544 aa8.22□□□□□ -1.09
SMCHD1-202ENST00000577300 CYP4F8P98187 520 aa8.22□□□□□ -1.09
SMCHD1-202ENST00000577300 TMEM62Q0P6H9 643 aa8.22□□□□□ -1.09
SMCHD1-202ENST00000577300 ZYXQ15942 572 aaKnown RBP8.22□□□□□ -1.09
SMCHD1-202ENST00000577300 TCERG1LQ5VWI1 586 aa8.22□□□□□ -1.09
SMCHD1-202ENST00000577300 DCAF15Q66K64 600 aa8.22□□□□□ -1.09
SMCHD1-202ENST00000577300 CWF19L1Q69YN2 538 aaKnown RBP8.22□□□□□ -1.09
SMCHD1-202ENST00000577300 TMEM151BQ8IW70 566 aa8.22□□□□□ -1.09
SMCHD1-202ENST00000577300 GP6Q9HCN6 339 aa8.22□□□□□ -1.09
SMCHD1-202ENST00000577300 TNFRSF12AQ9NP84 129 aa8.22□□□□□ -1.09
SMCHD1-202ENST00000577300 KLHL14Q9P2G3 628 aa8.22□□□□□ -1.09
SMCHD1-202ENST00000577300 FHOD1Q9Y613 1164 aa8.22□□□□□ -1.09
SMCHD1-202ENST00000577300 IRAK3Q9Y616 596 aa8.22□□□□□ -1.09
SMCHD1-202ENST00000577300 ADAMTS20P59510 1910 aa8.21□□□□□ -1.09
SMCHD1-202ENST00000577300 SCAMP3O14828 347 aaKnown RBP8.21□□□□□ -1.1
SMCHD1-202ENST00000577300 RECKO95980 971 aa8.21□□□□□ -1.1
SMCHD1-202ENST00000577300 ZNF445P59923 1031 aa8.21□□□□□ -1.1
SMCHD1-202ENST00000577300 FBXW10Q5XX13 1052 aa8.21□□□□□ -1.1
SMCHD1-202ENST00000577300 LSRQ86X29 649 aaPredicted RBP8.21□□□□□ -1.1
SMCHD1-202ENST00000577300 NUP43Q8NFH3 380 aa8.21□□□□□ -1.1
SMCHD1-202ENST00000577300 JMJD8Q96S16 334 aa8.21□□□□□ -1.1
SMCHD1-202ENST00000577300 H0Y8X5 98 aa8.2□□□□□ -1.1
SMCHD1-202ENST00000577300 IRS4O14654 1257 aaPredicted RBP8.2□□□□□ -1.1
SMCHD1-202ENST00000577300 GSTM1P09488 218 aa8.2□□□□□ -1.1
SMCHD1-202ENST00000577300 CD247P20963 164 aa8.2□□□□□ -1.1
SMCHD1-202ENST00000577300 EPHB3P54753 998 aa8.2□□□□□ -1.1
SMCHD1-202ENST00000577300 CBX2Q14781 532 aaPredicted RBP8.2□□□□□ -1.1
SMCHD1-202ENST00000577300 NOL9Q5SY16 702 aaKnown RBP8.2□□□□□ -1.1
SMCHD1-202ENST00000577300 HLA-DQA1Q5Y7H0 255 aa8.2□□□□□ -1.1
SMCHD1-202ENST00000577300 RUFY4Q6ZNE9 571 aa8.2□□□□□ -1.1
SMCHD1-202ENST00000577300 ZNF654Q8IZM8 581 aa8.2□□□□□ -1.1
SMCHD1-202ENST00000577300 SPATA32Q96LK8 384 aa8.2□□□□□ -1.1
SMCHD1-202ENST00000577300 IMPACTQ9P2X3 320 aa8.2□□□□□ -1.1
SMCHD1-202ENST00000577300 ZNF214Q9UL59 606 aaPredicted RBP8.2□□□□□ -1.1
SMCHD1-202ENST00000577300 PI3P19957 117 aa8.19□□□□□ -1.1
SMCHD1-202ENST00000577300 NOP2P46087 812 aaKnown RBP8.19□□□□□ -1.1
SMCHD1-202ENST00000577300 CDR1P51861 262 aa8.19□□□□□ -1.1
SMCHD1-202ENST00000577300 CYP2R1Q6VVX0 501 aa8.19□□□□□ -1.1
SMCHD1-202ENST00000577300 NAT16Q8N8M0 369 aa8.19□□□□□ -1.1
SMCHD1-202ENST00000577300 ZNF451Q9Y4E5 1061 aa8.19□□□□□ -1.1
SMCHD1-202ENST00000577300 A0A087WZG4 1122 aa8.18□□□□□ -1.1
SMCHD1-202ENST00000577300 FGF10O15520 208 aaPredicted RBP8.18□□□□□ -1.1
SMCHD1-202ENST00000577300 TP53P04637 393 aaPredicted RBP8.18□□□□□ -1.1
SMCHD1-202ENST00000577300 ITGA4P13612 1032 aa8.18□□□□□ -1.1
SMCHD1-202ENST00000577300 PAK2Q13177 524 aa8.18□□□□□ -1.1
SMCHD1-202ENST00000577300 RAB3GAP1Q15042 981 aa8.18□□□□□ -1.1
SMCHD1-202ENST00000577300 FIBCD1Q8N539 461 aa8.18□□□□□ -1.1
SMCHD1-202ENST00000577300 MZB1Q8WU39 189 aa8.18□□□□□ -1.1
SMCHD1-202ENST00000577300 BRF1Q92994 677 aa8.18□□□□□ -1.1
SMCHD1-202ENST00000577300 DACT3Q96B18 629 aaPredicted RBP8.18□□□□□ -1.1
SMCHD1-202ENST00000577300 PARD6AQ9NPB6 346 aa8.18□□□□□ -1.1
SMCHD1-202ENST00000577300 GINM1Q9NU53 330 aa8.18□□□□□ -1.1
SMCHD1-202ENST00000577300 SF3B6Q9Y3B4 125 aaKnown RBP8.18□□□□□ -1.1
SMCHD1-202ENST00000577300 SLC12A7Q9Y666 1083 aa8.18□□□□□ -1.1
SMCHD1-202ENST00000577300 HOXA5P20719 270 aa8.17□□□□□ -1.1
SMCHD1-202ENST00000577300 SOX9P48436 509 aa8.17□□□□□ -1.1
SMCHD1-202ENST00000577300 MVKQ03426 396 aa8.17□□□□□ -1.1
SMCHD1-202ENST00000577300 TMC6Q7Z403 805 aa8.17□□□□□ -1.1
SMCHD1-202ENST00000577300 METTL16Q86W50 562 aaKnown RBP8.17□□□□□ -1.1
SMCHD1-202ENST00000577300 RASGRP4Q8TDF6 673 aa8.17□□□□□ -1.1
SMCHD1-202ENST00000577300 PANK1Q8TE04 598 aa8.17□□□□□ -1.1
SMCHD1-202ENST00000577300 FCRL3Q96P31 734 aaPredicted RBP8.17□□□□□ -1.1
SMCHD1-202ENST00000577300 EPB41L4AQ9HCS5 686 aaPredicted RBP8.17□□□□□ -1.1
SMCHD1-202ENST00000577300 LTBP3Q9NS15 1303 aa8.17□□□□□ -1.1
SMCHD1-202ENST00000577300 NUDT19A8MXV4 375 aa8.16□□□□□ -1.1
SMCHD1-202ENST00000577300 BMP7P18075 431 aa8.16□□□□□ -1.1
SMCHD1-202ENST00000577300 NR1I3Q14994 352 aa8.16□□□□□ -1.1
SMCHD1-202ENST00000577300 TCEAL1Q15170 157 aa8.16□□□□□ -1.1
SMCHD1-202ENST00000577300 RPTNQ6XPR3 784 aa8.16□□□□□ -1.1
SMCHD1-202ENST00000577300 CCDC81Q6ZN84 652 aa8.16□□□□□ -1.1
SMCHD1-202ENST00000577300 LDHDQ86WU2 507 aa8.16□□□□□ -1.1
SMCHD1-202ENST00000577300 TMEFF1Q8IYR6 380 aa8.16□□□□□ -1.1
SMCHD1-202ENST00000577300 KCNC2Q96PR1 638 aa8.16□□□□□ -1.1
SMCHD1-202ENST00000577300 CRBNQ96SW2 442 aa8.16□□□□□ -1.1
SMCHD1-202ENST00000577300 DIS3Q9Y2L1 958 aaKnown RBP8.16□□□□□ -1.1
SMCHD1-202ENST00000577300 A0A1W2PQ27 194 aa8.15□□□□□ -1.1
SMCHD1-202ENST00000577300 A0A1W2PQ64 194 aa8.15□□□□□ -1.1
SMCHD1-202ENST00000577300 A0A1W2PQC6 194 aa8.15□□□□□ -1.1
SMCHD1-202ENST00000577300 A0A1W2PQD8 194 aa8.15□□□□□ -1.1
SMCHD1-202ENST00000577300 CBFA2T2O43439 604 aa8.15□□□□□ -1.1
SMCHD1-202ENST00000577300 AFF3P51826 1226 aaKnown RBP8.15□□□□□ -1.1
SMCHD1-202ENST00000577300 CTSWP56202 376 aa8.15□□□□□ -1.1
SMCHD1-202ENST00000577300 POU4F1Q01851 419 aa8.15□□□□□ -1.1
SMCHD1-202ENST00000577300 JAMLQ86YT9 394 aa8.15□□□□□ -1.1
SMCHD1-202ENST00000577300 IGDCC3Q8IVU1 814 aa8.15□□□□□ -1.1
SMCHD1-202ENST00000577300 C19orf47Q8N9M1 422 aaKnown RBP8.15□□□□□ -1.1
SMCHD1-202ENST00000577300 MARCH10Q8NA82 808 aaPredicted RBP8.15□□□□□ -1.1
SMCHD1-202ENST00000577300 OR6P1Q8NGX9 317 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms