RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 WDR44Q5JSH3 913 aa7.68□□□□□ -1.18
NUP88-212ENST00000576708 RIPOR1Q6ZS17 1223 aa7.68□□□□□ -1.18
NUP88-212ENST00000576708 CCDC84Q86UT8 332 aaPredicted RBP7.68□□□□□ -1.18
NUP88-212ENST00000576708 DZIP1Q86YF9 867 aaKnown RBP7.68□□□□□ -1.18
NUP88-212ENST00000576708 ZSCAN29Q8IWY8 852 aaPredicted RBP7.68□□□□□ -1.18
NUP88-212ENST00000576708 TMEM57Q8N5G2 664 aa7.68□□□□□ -1.18
NUP88-212ENST00000576708 CCDC155Q8N6L0 562 aa7.68□□□□□ -1.18
NUP88-212ENST00000576708 SH3TC2Q8TF17 1288 aa7.68□□□□□ -1.18
NUP88-212ENST00000576708 ARMC5Q96C12 935 aa7.68□□□□□ -1.18
NUP88-212ENST00000576708 HOOK2Q96ED9 719 aa7.68□□□□□ -1.18
NUP88-212ENST00000576708 HMG20BQ9P0W2 317 aa7.68□□□□□ -1.18
NUP88-212ENST00000576708 HDAC5Q9UQL6 1122 aa7.68□□□□□ -1.18
NUP88-212ENST00000576708 GAKO14976 1311 aa7.68□□□□□ -1.18
NUP88-212ENST00000576708 HTTP42858 3142 aa7.68□□□□□ -1.18
NUP88-212ENST00000576708 ATRNL1Q5VV63 1379 aa7.68□□□□□ -1.18
NUP88-212ENST00000576708 GNAI2P04899 355 aa7.67□□□□□ -1.18
NUP88-212ENST00000576708 MSX1P28360 303 aa7.67□□□□□ -1.18
NUP88-212ENST00000576708 LACTBP83111 547 aaPredicted RBP7.67□□□□□ -1.18
NUP88-212ENST00000576708 MECOMQ03112 1051 aa7.67□□□□□ -1.18
NUP88-212ENST00000576708 PDE4CQ08493 712 aa7.67□□□□□ -1.18
NUP88-212ENST00000576708 MTX1Q13505 466 aa7.67□□□□□ -1.18
NUP88-212ENST00000576708 NOL9Q5SY16 702 aaKnown RBP7.67□□□□□ -1.18
NUP88-212ENST00000576708 GPAT2Q6NUI2 795 aa7.67□□□□□ -1.18
NUP88-212ENST00000576708 C17orf99Q6UX52 265 aa7.67□□□□□ -1.18
NUP88-212ENST00000576708 ATF7IPQ6VMQ6 1270 aa7.67□□□□□ -1.18
NUP88-212ENST00000576708 VTI1AQ96AJ9 217 aa7.67□□□□□ -1.18
NUP88-212ENST00000576708 ZNF333Q96JL9 665 aa7.67□□□□□ -1.18
NUP88-212ENST00000576708 IDI2Q9BXS1 227 aa7.67□□□□□ -1.18
NUP88-212ENST00000576708 RUBCNLQ9H714 662 aa7.67□□□□□ -1.18
NUP88-212ENST00000576708 KCNH4Q9UQ05 1017 aa7.67□□□□□ -1.18
NUP88-212ENST00000576708 AKAP2Q9Y2D5 859 aa7.67□□□□□ -1.18
NUP88-212ENST00000576708 RFX7Q2KHR2 1363 aa7.67□□□□□ -1.18
NUP88-212ENST00000576708 IPO8O15397 1037 aaKnown RBP7.66□□□□□ -1.18
NUP88-212ENST00000576708 ENTPD3O75355 529 aa7.66□□□□□ -1.18
NUP88-212ENST00000576708 CYP2C8P10632 490 aa7.66□□□□□ -1.18
NUP88-212ENST00000576708 PDIA4P13667 645 aaKnown RBP7.66□□□□□ -1.18
NUP88-212ENST00000576708 PSMC4P43686 418 aa7.66□□□□□ -1.18
NUP88-212ENST00000576708 RHBDL3P58872 404 aa7.66□□□□□ -1.18
NUP88-212ENST00000576708 G3BP1Q13283 466 aaKnown RBP eCLIP7.66□□□□□ -1.18
NUP88-212ENST00000576708 MVPQ14764 893 aaKnown RBP7.66□□□□□ -1.18
NUP88-212ENST00000576708 NAA30Q147X3 362 aaPredicted RBP7.66□□□□□ -1.18
NUP88-212ENST00000576708 SLC9C1Q4G0N8 1177 aa7.66□□□□□ -1.18
NUP88-212ENST00000576708 GORABQ5T7V8 394 aa7.66□□□□□ -1.18
NUP88-212ENST00000576708 GADL1Q6ZQY3 521 aa7.66□□□□□ -1.18
NUP88-212ENST00000576708 ANKRD23Q86SG2 305 aa7.66□□□□□ -1.18
NUP88-212ENST00000576708 SCYL3Q8IZE3 742 aa7.66□□□□□ -1.18
NUP88-212ENST00000576708 ZGPATQ8N5A5 531 aaKnown RBP7.66□□□□□ -1.18
NUP88-212ENST00000576708 SPATA5Q8NB90 893 aa7.66□□□□□ -1.18
NUP88-212ENST00000576708 PHACTR1Q9C0D0 580 aa7.66□□□□□ -1.18
NUP88-212ENST00000576708 ZCCHC17Q9NP64 241 aaKnown RBP7.66□□□□□ -1.18
NUP88-212ENST00000576708 DYRK1BQ9Y463 629 aa7.66□□□□□ -1.18
NUP88-212ENST00000576708 ZHX2Q9Y6X8 837 aa7.66□□□□□ -1.18
NUP88-212ENST00000576708 MROH7-TTC4A0A0A0MT08 1334 aa7.66□□□□□ -1.18
NUP88-212ENST00000576708 ADGRA2Q96PE1 1338 aa7.66□□□□□ -1.18
NUP88-212ENST00000576708 AK9Q5TCS8 1911 aa7.66□□□□□ -1.18
NUP88-212ENST00000576708 MYH2Q9UKX2 1941 aa7.66□□□□□ -1.18
NUP88-212ENST00000576708 GPR75-ASB3A0A0A6YYF3 556 aa7.65□□□□□ -1.18
NUP88-212ENST00000576708 A0A1B0GTH6 734 aa7.65□□□□□ -1.18
NUP88-212ENST00000576708 PTPRAP18433 802 aa7.65□□□□□ -1.18
NUP88-212ENST00000576708 ATP4AP20648 1035 aa7.65□□□□□ -1.18
NUP88-212ENST00000576708 MCAMP43121 646 aa7.65□□□□□ -1.18
NUP88-212ENST00000576708 HNRNPUQ00839 825 aaKnown RBP eCLIP7.65□□□□□ -1.18
NUP88-212ENST00000576708 RRP1BQ14684 758 aaKnown RBP7.65□□□□□ -1.18
NUP88-212ENST00000576708 KIF22Q14807 665 aa7.65□□□□□ -1.18
NUP88-212ENST00000576708 PDS5AQ29RF7 1337 aaKnown RBP7.65□□□□□ -1.18
NUP88-212ENST00000576708 SLC4A8Q2Y0W8 1093 aa7.65□□□□□ -1.18
NUP88-212ENST00000576708 ZKSCAN2Q63HK3 967 aa7.65□□□□□ -1.18
NUP88-212ENST00000576708 SPTY2D1Q68D10 685 aaPredicted RBP7.65□□□□□ -1.18
NUP88-212ENST00000576708 ALDH16A1Q8IZ83 802 aa7.65□□□□□ -1.18
NUP88-212ENST00000576708 STAG2Q8N3U4 1231 aa7.65□□□□□ -1.18
NUP88-212ENST00000576708 NSUN4Q96CB9 384 aaKnown RBP7.65□□□□□ -1.18
NUP88-212ENST00000576708 DBNDD2Q9BQY9 259 aa7.65□□□□□ -1.18
NUP88-212ENST00000576708 PICK1Q9NRD5 415 aa7.65□□□□□ -1.18
NUP88-212ENST00000576708 CUEDC1Q9NWM3 386 aaPredicted RBP7.65□□□□□ -1.18
NUP88-212ENST00000576708 RAI14Q9P0K7 980 aa7.65□□□□□ -1.18
NUP88-212ENST00000576708 SEPT3Q9UH03 358 aa7.65□□□□□ -1.18
NUP88-212ENST00000576708 AFG3L2Q9Y4W6 797 aa7.65□□□□□ -1.18
NUP88-212ENST00000576708 DOCK2Q92608 1830 aa7.64□□□□□ -1.19
NUP88-212ENST00000576708 A0A0G2JLL6 359 aaPredicted RBP7.64□□□□□ -1.19
NUP88-212ENST00000576708 TRIM75PA6NK02 468 aa7.64□□□□□ -1.19
NUP88-212ENST00000576708 CXCL11O14625 94 aa7.64□□□□□ -1.19
NUP88-212ENST00000576708 PPFIA3O75145 1194 aa7.64□□□□□ -1.19
NUP88-212ENST00000576708 F11P03951 625 aa7.64□□□□□ -1.19
NUP88-212ENST00000576708 RLBP1P12271 317 aa7.64□□□□□ -1.19
NUP88-212ENST00000576708 ARID4AP29374 1257 aaPredicted RBP7.64□□□□□ -1.19
NUP88-212ENST00000576708 ATP8B2P98198 1209 aa7.64□□□□□ -1.19
NUP88-212ENST00000576708 MAP3K10Q02779 954 aa7.64□□□□□ -1.19
NUP88-212ENST00000576708 ARHGEF6Q15052 776 aa7.64□□□□□ -1.19
NUP88-212ENST00000576708 TNNI3KQ59H18 835 aa7.64□□□□□ -1.19
NUP88-212ENST00000576708 ARSJQ5FYB0 599 aaPredicted RBP7.64□□□□□ -1.19
NUP88-212ENST00000576708 PRRT2Q7Z6L0 340 aaPredicted RBP7.64□□□□□ -1.19
NUP88-212ENST00000576708 NBPF11Q86T75 865 aa7.64□□□□□ -1.19
NUP88-212ENST00000576708 SH3RF3Q8TEJ3 882 aaPredicted RBP7.64□□□□□ -1.19
NUP88-212ENST00000576708 TRAIPQ9BWF2 469 aa7.64□□□□□ -1.19
NUP88-212ENST00000576708 SRRDQ9UH36 339 aa7.64□□□□□ -1.19
NUP88-212ENST00000576708 GABRQQ9UN88 632 aa7.64□□□□□ -1.19
NUP88-212ENST00000576708 FPGT-TNNI3KV9GXZ4 949 aa7.64□□□□□ -1.19
NUP88-212ENST00000576708 MYPNQ86TC9 1320 aa7.63□□□□□ -1.19
NUP88-212ENST00000576708 CENPFP49454 3210 aa7.63□□□□□ -1.19
NUP88-212ENST00000576708 SURF6O75683 361 aaKnown RBP7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 110.4 ms