RNA–Protein interactions for RNA: ENST00000574911.5

NCBP3-204, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 2,701 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-204ENST00000574911 ACRBPQ8NEB7 543 aa10.07□□□□□ -0.8
NCBP3-204ENST00000574911 TUBB2BQ9BVA1 445 aa10.07□□□□□ -0.8
NCBP3-204ENST00000574911 RTFDC1Q9BY42 306 aaPredicted RBP10.07□□□□□ -0.8
NCBP3-204ENST00000574911 CDC23Q9UJX2 597 aa10.07□□□□□ -0.8
NCBP3-204ENST00000574911 MAPK8IP1Q9UQF2 711 aa10.07□□□□□ -0.8
NCBP3-204ENST00000574911 RHOBTB3O94955 611 aa10.07□□□□□ -0.8
NCBP3-204ENST00000574911 UBA7P41226 1012 aa10.07□□□□□ -0.8
NCBP3-204ENST00000574911 ARHGAP25P42331 645 aa10.07□□□□□ -0.8
NCBP3-204ENST00000574911 ZNF569Q5MCW4 686 aa10.07□□□□□ -0.8
NCBP3-204ENST00000574911 ZNF804AQ7Z570 1209 aa10.07□□□□□ -0.8
NCBP3-204ENST00000574911 GIMAP8Q8ND71 665 aaPredicted RBP10.07□□□□□ -0.8
NCBP3-204ENST00000574911 LRRC15Q8TF66 581 aa10.07□□□□□ -0.8
NCBP3-204ENST00000574911 NUP88Q99567 741 aaPredicted RBP10.07□□□□□ -0.8
NCBP3-204ENST00000574911 SPZ1Q9BXG8 430 aa10.07□□□□□ -0.8
NCBP3-204ENST00000574911 PARD6BQ9BYG5 372 aa10.07□□□□□ -0.8
NCBP3-204ENST00000574911 UBXN6Q9BZV1 441 aa10.07□□□□□ -0.8
NCBP3-204ENST00000574911 ZMYND12Q9H0C1 365 aa10.07□□□□□ -0.8
NCBP3-204ENST00000574911 THAP9Q9H5L6 903 aa10.07□□□□□ -0.8
NCBP3-204ENST00000574911 CCNL1Q9UK58 526 aaPredicted RBP10.07□□□□□ -0.8
NCBP3-204ENST00000574911 NHSQ6T4R5 1651 aa10.06□□□□□ -0.8
NCBP3-204ENST00000574911 A0A1W2PQC6 194 aa10.06□□□□□ -0.8
NCBP3-204ENST00000574911 TRIM49BA6NDI0 452 aa10.06□□□□□ -0.8
NCBP3-204ENST00000574911 TBC1D8O95759 1140 aa10.06□□□□□ -0.8
NCBP3-204ENST00000574911 EEF1GP26641 437 aaKnown RBP10.06□□□□□ -0.8
NCBP3-204ENST00000574911 PMS1P54277 932 aaKnown RBP10.06□□□□□ -0.8
NCBP3-204ENST00000574911 UBXN1Q04323 297 aa10.06□□□□□ -0.8
NCBP3-204ENST00000574911 NFIXQ14938 502 aa10.06□□□□□ -0.8
NCBP3-204ENST00000574911 MAPKAPK5Q8IW41 473 aa10.06□□□□□ -0.8
NCBP3-204ENST00000574911 SLC35F6Q8N357 371 aa10.06□□□□□ -0.8
NCBP3-204ENST00000574911 MB21D1Q8N884 522 aa10.06□□□□□ -0.8
NCBP3-204ENST00000574911 CEP112Q8N8E3 955 aa10.06□□□□□ -0.8
NCBP3-204ENST00000574911 ZNF507Q8TCN5 953 aa10.06□□□□□ -0.8
NCBP3-204ENST00000574911 CUEDC2Q9H467 287 aa10.06□□□□□ -0.8
NCBP3-204ENST00000574911 MAGEF1Q9HAY2 307 aa10.06□□□□□ -0.8
NCBP3-204ENST00000574911 SAP30BPQ9UHR5 308 aaKnown RBP10.06□□□□□ -0.8
NCBP3-204ENST00000574911 SNED1Q8TER0 1413 aa10.06□□□□□ -0.8
NCBP3-204ENST00000574911 FLT1P17948 1338 aa10.06□□□□□ -0.8
NCBP3-204ENST00000574911 LGALS16A8MUM7 142 aa10.06□□□□□ -0.8
NCBP3-204ENST00000574911 SASH3O75995 380 aa10.06□□□□□ -0.8
NCBP3-204ENST00000574911 KRT9P35527 623 aa10.06□□□□□ -0.8
NCBP3-204ENST00000574911 JAKMIP3Q5VZ66 844 aa10.06□□□□□ -0.8
NCBP3-204ENST00000574911 C16orf86Q6ZW13 317 aa10.06□□□□□ -0.8
NCBP3-204ENST00000574911 CERS3Q8IU89 383 aa10.06□□□□□ -0.8
NCBP3-204ENST00000574911 CREBRFQ8IUR6 639 aa10.06□□□□□ -0.8
NCBP3-204ENST00000574911 NOC3LQ8WTT2 800 aaKnown RBP10.06□□□□□ -0.8
NCBP3-204ENST00000574911 AK8Q96MA6 479 aa10.06□□□□□ -0.8
NCBP3-204ENST00000574911 ZNF287Q9HBT7 754 aa10.06□□□□□ -0.8
NCBP3-204ENST00000574911 MYO1AQ9UBC5 1043 aa10.06□□□□□ -0.8
NCBP3-204ENST00000574911 STX8Q9UNK0 236 aa10.06□□□□□ -0.8
NCBP3-204ENST00000574911 DDX60LQ5H9U9 1706 aaKnown RBP10.06□□□□□ -0.8
NCBP3-204ENST00000574911 CTAGE9A4FU28 777 aa10.06□□□□□ -0.8
NCBP3-204ENST00000574911 KLRF2D3W0D1 207 aa10.06□□□□□ -0.8
NCBP3-204ENST00000574911 ABL1P00519 1130 aa10.06□□□□□ -0.8
NCBP3-204ENST00000574911 GOLGA8HP0CJ92 632 aa10.06□□□□□ -0.8
NCBP3-204ENST00000574911 CDK8P49336 464 aa10.06□□□□□ -0.8
NCBP3-204ENST00000574911 CHMP4BP1P59074 171 aa10.06□□□□□ -0.8
NCBP3-204ENST00000574911 TTI2Q6NXR4 508 aa10.06□□□□□ -0.8
NCBP3-204ENST00000574911 KRT25Q7Z3Z0 450 aa10.06□□□□□ -0.8
NCBP3-204ENST00000574911 NEDD1Q8NHV4 660 aa10.06□□□□□ -0.8
NCBP3-204ENST00000574911 GPR75-ASB3A0A0A6YYF3 556 aa10.05□□□□□ -0.8
NCBP3-204ENST00000574911 OR52Z1P0C646 297 aa10.05□□□□□ -0.8
NCBP3-204ENST00000574911 SMARCA1P28370 1054 aa10.05□□□□□ -0.8
NCBP3-204ENST00000574911 BTDP43251 543 aa10.05□□□□□ -0.8
NCBP3-204ENST00000574911 NOVP48745 357 aa10.05□□□□□ -0.8
NCBP3-204ENST00000574911 GPSM2P81274 684 aa10.05□□□□□ -0.8
NCBP3-204ENST00000574911 STIM1Q13586 685 aa10.05□□□□□ -0.8
NCBP3-204ENST00000574911 CABP7Q86V35 215 aa10.05□□□□□ -0.8
NCBP3-204ENST00000574911 RASSF8Q8NHQ8 419 aa10.05□□□□□ -0.8
NCBP3-204ENST00000574911 DHTKD1Q96HY7 919 aaPredicted RBP10.05□□□□□ -0.8
NCBP3-204ENST00000574911 GPR101Q96P66 508 aaPredicted RBP10.05□□□□□ -0.8
NCBP3-204ENST00000574911 EYA3Q99504 573 aa10.05□□□□□ -0.8
NCBP3-204ENST00000574911 CHP1Q99653 195 aa10.05□□□□□ -0.8
NCBP3-204ENST00000574911 C7orf25Q9BPX7 421 aa10.05□□□□□ -0.8
NCBP3-204ENST00000574911 BAZ2BQ9UIF8 2168 aaKnown RBP10.05□□□□□ -0.8
NCBP3-204ENST00000574911 TTC26A0AVF1 554 aa10.05□□□□□ -0.8
NCBP3-204ENST00000574911 PSMA7O14818 248 aa10.05□□□□□ -0.8
NCBP3-204ENST00000574911 PLCG1P19174 1290 aa10.05□□□□□ -0.8
NCBP3-204ENST00000574911 NAPAP54920 295 aa10.05□□□□□ -0.8
NCBP3-204ENST00000574911 BRD3Q15059 726 aa10.05□□□□□ -0.8
NCBP3-204ENST00000574911 KIF4BQ2VIQ3 1234 aa10.05□□□□□ -0.8
NCBP3-204ENST00000574911 PLIN2Q99541 437 aa10.05□□□□□ -0.8
NCBP3-204ENST00000574911 DNAJC7Q99615 494 aa10.05□□□□□ -0.8
NCBP3-204ENST00000574911 NAPGQ99747 312 aaPredicted RBP10.05□□□□□ -0.8
NCBP3-204ENST00000574911 DUSP9Q99956 384 aaKnown RBP10.05□□□□□ -0.8
NCBP3-204ENST00000574911 SLF1Q9BQI6 1058 aa10.05□□□□□ -0.8
NCBP3-204ENST00000574911 CD209Q9NNX6 404 aa10.05□□□□□ -0.8
NCBP3-204ENST00000574911 ARFGAP3Q9NP61 516 aa10.05□□□□□ -0.8
NCBP3-204ENST00000574911 CAPN11Q9UMQ6 739 aa10.05□□□□□ -0.8
NCBP3-204ENST00000574911 MTMR7Q9Y216 660 aa10.05□□□□□ -0.8
NCBP3-204ENST00000574911 REXO2Q9Y3B8 237 aaKnown RBP10.05□□□□□ -0.8
NCBP3-204ENST00000574911 SMCO2A6NFE2 343 aa10.04□□□□□ -0.8
NCBP3-204ENST00000574911 IL1R1P14778 569 aa10.04□□□□□ -0.8
NCBP3-204ENST00000574911 RFC4P35249 363 aa10.04□□□□□ -0.8
NCBP3-204ENST00000574911 TUBB4BP68371 445 aa10.04□□□□□ -0.8
NCBP3-204ENST00000574911 NONOQ15233 471 aaKnown RBP eCLIP10.04□□□□□ -0.8
NCBP3-204ENST00000574911 TXNRD1Q16881 649 aa10.04□□□□□ -0.8
NCBP3-204ENST00000574911 TRAPPC3LQ5T215 181 aa10.04□□□□□ -0.8
NCBP3-204ENST00000574911 MSANTD4Q8NCY6 345 aa10.04□□□□□ -0.8
NCBP3-204ENST00000574911 OR8K1Q8NGG5 319 aa10.04□□□□□ -0.8
NCBP3-204ENST00000574911 TRIM47Q96LD4 638 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms