RNA–Protein interactions for RNA: ENST00000574855.1

NUP88-209, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-209ENST00000574855 FHOD1Q9Y613 1164 aa5.17□□□□□ -1.58
NUP88-209ENST00000574855 A0A087WZG4 1122 aa5.16□□□□□ -1.58
NUP88-209ENST00000574855 A0A1W2PQ45 241 aaPredicted RBP5.16□□□□□ -1.58
NUP88-209ENST00000574855 A0A1W2PQH9 124 aa5.16□□□□□ -1.58
NUP88-209ENST00000574855 A0A1W2PQY0 241 aa5.16□□□□□ -1.58
NUP88-209ENST00000574855 OR14I1A6ND48 311 aa5.16□□□□□ -1.58
NUP88-209ENST00000574855 PEX10O60683 326 aa5.16□□□□□ -1.58
NUP88-209ENST00000574855 GSTM1P09488 218 aa5.16□□□□□ -1.58
NUP88-209ENST00000574855 C1QTNF9P0C862 333 aa5.16□□□□□ -1.58
NUP88-209ENST00000574855 PNLIPP16233 465 aa5.16□□□□□ -1.58
NUP88-209ENST00000574855 GALK1P51570 392 aa5.16□□□□□ -1.58
NUP88-209ENST00000574855 JAG1P78504 1218 aa5.16□□□□□ -1.58
NUP88-209ENST00000574855 SLC7A5Q01650 507 aa5.16□□□□□ -1.58
NUP88-209ENST00000574855 HEATR6Q6AI08 1181 aaKnown RBP5.16□□□□□ -1.58
NUP88-209ENST00000574855 TMEM132EQ6IEE7 984 aa5.16□□□□□ -1.58
NUP88-209ENST00000574855 ZNF605Q86T29 641 aa5.16□□□□□ -1.58
NUP88-209ENST00000574855 VPS37DQ86XT2 251 aa5.16□□□□□ -1.58
NUP88-209ENST00000574855 FIBCD1Q8N539 461 aa5.16□□□□□ -1.58
NUP88-209ENST00000574855 SHDQ96IW2 340 aa5.16□□□□□ -1.58
NUP88-209ENST00000574855 NOL6Q9H6R4 1146 aaKnown RBP5.16□□□□□ -1.58
NUP88-209ENST00000574855 ZNF552Q9H707 407 aaPredicted RBP5.16□□□□□ -1.58
NUP88-209ENST00000574855 AP5S1Q9NUS5 200 aa5.16□□□□□ -1.58
NUP88-209ENST00000574855 ERVK13-1Q9NX77 482 aa5.16□□□□□ -1.58
NUP88-209ENST00000574855 DIS3Q9Y2L1 958 aaKnown RBP5.16□□□□□ -1.58
NUP88-209ENST00000574855 H0Y8X5 98 aa5.15□□□□□ -1.59
NUP88-209ENST00000574855 ETV2O00321 342 aaPredicted RBP5.15□□□□□ -1.59
NUP88-209ENST00000574855 HSP90B1P14625 803 aaKnown RBP5.15□□□□□ -1.59
NUP88-209ENST00000574855 GLDCP23378 1020 aa5.15□□□□□ -1.59
NUP88-209ENST00000574855 ERCC5P28715 1186 aaPredicted RBP5.15□□□□□ -1.59
NUP88-209ENST00000574855 ARL4AP40617 200 aa5.15□□□□□ -1.59
NUP88-209ENST00000574855 CASP7P55210 303 aa5.15□□□□□ -1.59
NUP88-209ENST00000574855 POU4F1Q01851 419 aa5.15□□□□□ -1.59
NUP88-209ENST00000574855 ADGRF1Q5T601 910 aa5.15□□□□□ -1.59
NUP88-209ENST00000574855 KRTAP5-3Q6L8H2 238 aa5.15□□□□□ -1.59
NUP88-209ENST00000574855 ATG14Q6ZNE5 492 aa5.15□□□□□ -1.59
NUP88-209ENST00000574855 ADAT2Q7Z6V5 191 aaKnown RBP5.15□□□□□ -1.59
NUP88-209ENST00000574855 NAT16Q8N8M0 369 aa5.15□□□□□ -1.59
NUP88-209ENST00000574855 TOX2Q96NM4 488 aa5.15□□□□□ -1.59
NUP88-209ENST00000574855 HAUS7Q99871 368 aa5.15□□□□□ -1.59
NUP88-209ENST00000574855 SLC12A9Q9BXP2 914 aa5.15□□□□□ -1.59
NUP88-209ENST00000574855 KRTAP4-5Q9BYR2 181 aa5.15□□□□□ -1.59
NUP88-209ENST00000574855 GBP3Q9H0R5 595 aa5.15□□□□□ -1.59
NUP88-209ENST00000574855 CAPN10Q9HC96 672 aa5.15□□□□□ -1.59
NUP88-209ENST00000574855 WHRNQ9P202 907 aa5.15□□□□□ -1.59
NUP88-209ENST00000574855 PCDHB10Q9UN67 800 aa5.15□□□□□ -1.59
NUP88-209ENST00000574855 GPR55Q9Y2T6 319 aaPredicted RBP5.15□□□□□ -1.59
NUP88-209ENST00000574855 TAF6LQ9Y6J9 622 aa5.15□□□□□ -1.59
NUP88-209ENST00000574855 A0A1W2PQ27 194 aa5.14□□□□□ -1.59
NUP88-209ENST00000574855 A0A1W2PQ64 194 aa5.14□□□□□ -1.59
NUP88-209ENST00000574855 A0A1W2PQC6 194 aa5.14□□□□□ -1.59
NUP88-209ENST00000574855 A0A1W2PQD8 194 aa5.14□□□□□ -1.59
NUP88-209ENST00000574855 TCAF2A6NFQ2 919 aa5.14□□□□□ -1.59
NUP88-209ENST00000574855 CBFA2T2O43439 604 aa5.14□□□□□ -1.59
NUP88-209ENST00000574855 PPM1BO75688 479 aa5.14□□□□□ -1.59
NUP88-209ENST00000574855 KRT1P04264 644 aa5.14□□□□□ -1.59
NUP88-209ENST00000574855 MED14OSP0DP75 135 aa5.14□□□□□ -1.59
NUP88-209ENST00000574855 LAPTM5Q13571 262 aa5.14□□□□□ -1.59
NUP88-209ENST00000574855 GNL2Q13823 731 aaKnown RBP5.14□□□□□ -1.59
NUP88-209ENST00000574855 HSF5Q4G112 596 aaPredicted RBP5.14□□□□□ -1.59
NUP88-209ENST00000574855 RTP2Q5QGT7 225 aa5.14□□□□□ -1.59
NUP88-209ENST00000574855 HLA-DQA1Q5Y7H0 255 aa5.14□□□□□ -1.59
NUP88-209ENST00000574855 JAMLQ86YT9 394 aa5.14□□□□□ -1.59
NUP88-209ENST00000574855 PLCD4Q9BRC7 762 aa5.14□□□□□ -1.59
NUP88-209ENST00000574855 TEX51A0A1B0GUA7 166 aa5.13□□□□□ -1.59
NUP88-209ENST00000574855 SEMA7AO75326 666 aa5.13□□□□□ -1.59
NUP88-209ENST00000574855 EFEMP2O95967 443 aa5.13□□□□□ -1.59
NUP88-209ENST00000574855 MPOP05164 745 aa5.13□□□□□ -1.59
NUP88-209ENST00000574855 TCF3P15923 654 aa5.13□□□□□ -1.59
NUP88-209ENST00000574855 PRKCAP17252 672 aa5.13□□□□□ -1.59
NUP88-209ENST00000574855 ATF4P18848 351 aaPredicted RBP5.13□□□□□ -1.59
NUP88-209ENST00000574855 CYP4F8P98187 520 aa5.13□□□□□ -1.59
NUP88-209ENST00000574855 PPP2R5DQ14738 602 aa5.13□□□□□ -1.59
NUP88-209ENST00000574855 CYP2R1Q6VVX0 501 aa5.13□□□□□ -1.59
NUP88-209ENST00000574855 SLCO6A1Q86UG4 719 aa5.13□□□□□ -1.59
NUP88-209ENST00000574855 TMEM52Q8NDY8 209 aa5.13□□□□□ -1.59
NUP88-209ENST00000574855 ZSCAN18Q8TBC5 510 aaPredicted RBP5.13□□□□□ -1.59
NUP88-209ENST00000574855 ANAPC16Q96DE5 110 aa5.13□□□□□ -1.59
NUP88-209ENST00000574855 ZDHHC15Q96MV8 337 aa5.13□□□□□ -1.59
NUP88-209ENST00000574855 FCRL3Q96P31 734 aaPredicted RBP5.13□□□□□ -1.59
NUP88-209ENST00000574855 CHMP4AQ9BY43 222 aa5.13□□□□□ -1.59
NUP88-209ENST00000574855 MCOLN1Q9GZU1 580 aa5.13□□□□□ -1.59
NUP88-209ENST00000574855 KLHL25Q9H0H3 589 aa5.13□□□□□ -1.59
NUP88-209ENST00000574855 MYOCOSA0A1B0GUC4 107 aa5.12□□□□□ -1.59
NUP88-209ENST00000574855 NPIPB6E9PJ23 425 aa5.12□□□□□ -1.59
NUP88-209ENST00000574855 HRKO00198 91 aa5.12□□□□□ -1.59
NUP88-209ENST00000574855 ABLIM1O14639 778 aa5.12□□□□□ -1.59
NUP88-209ENST00000574855 TBC1D8O95759 1140 aa5.12□□□□□ -1.59
NUP88-209ENST00000574855 EPHX1P07099 455 aa5.12□□□□□ -1.59
NUP88-209ENST00000574855 CFPP27918 469 aa5.12□□□□□ -1.59
NUP88-209ENST00000574855 DLG4P78352 724 aa5.12□□□□□ -1.59
NUP88-209ENST00000574855 KRTAP19-4Q3LI73 84 aa5.12□□□□□ -1.59
NUP88-209ENST00000574855 OLFML2BQ68BL8 750 aa5.12□□□□□ -1.59
NUP88-209ENST00000574855 KIAA1211LQ6NV74 962 aa5.12□□□□□ -1.59
NUP88-209ENST00000574855 VHLLQ6RSH7 139 aa5.12□□□□□ -1.59
NUP88-209ENST00000574855 NUP43Q8NFH3 380 aa5.12□□□□□ -1.59
NUP88-209ENST00000574855 ADCY4Q8NFM4 1077 aa5.12□□□□□ -1.59
NUP88-209ENST00000574855 KLHL6Q8WZ60 621 aa5.12□□□□□ -1.59
NUP88-209ENST00000574855 PUS7Q96PZ0 661 aaKnown RBP5.12□□□□□ -1.59
NUP88-209ENST00000574855 CD320Q9NPF0 282 aa5.12□□□□□ -1.59
NUP88-209ENST00000574855 ACSL6Q9UKU0 697 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms