RNA–Protein interactions for RNA: ENST00000573994.1

RPA1-206, Transcript of replication protein A1, humanhuman

TSL 2

Gene RPA1, Length 844 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-206ENST00000573994 ZNF236Q9UL36 1845 aa11.83□□□□□ -0.52
RPA1-206ENST00000573994 SLC25A27O95847 323 aa11.82□□□□□ -0.52
RPA1-206ENST00000573994 FCER1AP12319 257 aa11.82□□□□□ -0.52
RPA1-206ENST00000573994 BMP3P12645 472 aa11.82□□□□□ -0.52
RPA1-206ENST00000573994 GSPT1P15170 499 aaKnown RBP11.82□□□□□ -0.52
RPA1-206ENST00000573994 CNGA1P29973 690 aa11.82□□□□□ -0.52
RPA1-206ENST00000573994 STAT3P40763 770 aa11.82□□□□□ -0.52
RPA1-206ENST00000573994 ALX1Q15699 326 aa11.82□□□□□ -0.52
RPA1-206ENST00000573994 NECAB2Q7Z6G3 386 aa11.82□□□□□ -0.52
RPA1-206ENST00000573994 RIOX2Q8IUF8 465 aa11.82□□□□□ -0.52
RPA1-206ENST00000573994 TBC1D10CQ8IV04 446 aa11.82□□□□□ -0.52
RPA1-206ENST00000573994 CPXCR1Q8N123 301 aa11.82□□□□□ -0.52
RPA1-206ENST00000573994 MKL1Q969V6 931 aa11.82□□□□□ -0.52
RPA1-206ENST00000573994 TEX13BQ9BXU2 312 aa11.82□□□□□ -0.52
RPA1-206ENST00000573994 IL17RBQ9NRM6 502 aa11.82□□□□□ -0.52
RPA1-206ENST00000573994 OGDHLQ9ULD0 1010 aa11.82□□□□□ -0.52
RPA1-206ENST00000573994 SYNPO2Q9UMS6 1093 aa11.82□□□□□ -0.52
RPA1-206ENST00000573994 ZMYM6O95789 1325 aa11.82□□□□□ -0.52
RPA1-206ENST00000573994 PARP14Q460N5 1801 aa11.81□□□□□ -0.52
RPA1-206ENST00000573994 TMEM232C9JQI7 657 aa11.81□□□□□ -0.52
RPA1-206ENST00000573994 STRNO43815 780 aa11.81□□□□□ -0.52
RPA1-206ENST00000573994 ORC4O43929 436 aa11.81□□□□□ -0.52
RPA1-206ENST00000573994 CYBAP13498 195 aa11.81□□□□□ -0.52
RPA1-206ENST00000573994 SLC1A4P43007 532 aa11.81□□□□□ -0.52
RPA1-206ENST00000573994 IKQ13123 557 aaPredicted RBP11.81□□□□□ -0.52
RPA1-206ENST00000573994 PPP4R3BQ5MIZ7 849 aa11.81□□□□□ -0.52
RPA1-206ENST00000573994 KCTD1Q719H9 257 aa11.81□□□□□ -0.52
RPA1-206ENST00000573994 ABRAQ8N0Z2 381 aa11.81□□□□□ -0.52
RPA1-206ENST00000573994 ANKLE1Q8NAG6 615 aa11.81□□□□□ -0.52
RPA1-206ENST00000573994 MAML3Q96JK9 1138 aa11.81□□□□□ -0.52
RPA1-206ENST00000573994 C11orf49Q9H6J7 331 aa11.81□□□□□ -0.52
RPA1-206ENST00000573994 RAVER2Q9HCJ3 691 aaKnown RBP11.81□□□□□ -0.52
RPA1-206ENST00000573994 FEM1BQ9UK73 627 aa11.81□□□□□ -0.52
RPA1-206ENST00000573994 CTDP1Q9Y5B0 961 aaPredicted RBP11.81□□□□□ -0.52
RPA1-206ENST00000573994 NEDD4P46934 1319 aa11.81□□□□□ -0.52
RPA1-206ENST00000573994 ZBED4O75132 1171 aa11.8□□□□□ -0.52
RPA1-206ENST00000573994 IGHA2P01877 340 aa11.8□□□□□ -0.52
RPA1-206ENST00000573994 TAL1P17542 331 aaPredicted RBP11.8□□□□□ -0.52
RPA1-206ENST00000573994 MCCP23508 829 aa11.8□□□□□ -0.52
RPA1-206ENST00000573994 SNAP25P60880 206 aa11.8□□□□□ -0.52
RPA1-206ENST00000573994 KCTD2Q14681 263 aa11.8□□□□□ -0.52
RPA1-206ENST00000573994 CCDC96Q2M329 555 aa11.8□□□□□ -0.52
RPA1-206ENST00000573994 TTC22Q5TAA0 569 aa11.8□□□□□ -0.52
RPA1-206ENST00000573994 ANO1Q5XXA6 986 aa11.8□□□□□ -0.52
RPA1-206ENST00000573994 OLFML2BQ68BL8 750 aa11.8□□□□□ -0.52
RPA1-206ENST00000573994 C7orf61Q8IZ16 206 aa11.8□□□□□ -0.52
RPA1-206ENST00000573994 PRPF38AQ8NAV1 312 aaKnown RBP11.8□□□□□ -0.52
RPA1-206ENST00000573994 IL25Q9H293 177 aa11.8□□□□□ -0.52
RPA1-206ENST00000573994 SLC38A10Q9HBR0 1119 aa11.8□□□□□ -0.52
RPA1-206ENST00000573994 HOMER2Q9NSB8 354 aa11.8□□□□□ -0.52
RPA1-206ENST00000573994 SLC5A4Q9NY91 659 aa11.8□□□□□ -0.52
RPA1-206ENST00000573994 DDX20Q9UHI6 824 aaKnown RBP11.8□□□□□ -0.52
RPA1-206ENST00000573994 RIPK3Q9Y572 518 aa11.8□□□□□ -0.52
RPA1-206ENST00000573994 PFASO15067 1338 aa11.8□□□□□ -0.52
RPA1-206ENST00000573994 EVI5O60447 810 aa11.79□□□□□ -0.52
RPA1-206ENST00000573994 FGRP09769 529 aa11.79□□□□□ -0.52
RPA1-206ENST00000573994 COPB2P35606 906 aa11.79□□□□□ -0.52
RPA1-206ENST00000573994 STAT2P52630 851 aa11.79□□□□□ -0.52
RPA1-206ENST00000573994 MFAP1P55081 439 aaKnown RBP11.79□□□□□ -0.52
RPA1-206ENST00000573994 PRAMEF19Q5SWL8 479 aa11.79□□□□□ -0.52
RPA1-206ENST00000573994 AKNAD1Q5T1N1 836 aa11.79□□□□□ -0.52
RPA1-206ENST00000573994 STAG1Q8WVM7 1258 aa11.79□□□□□ -0.52
RPA1-206ENST00000573994 GMCL1Q96IK5 515 aa11.79□□□□□ -0.52
RPA1-206ENST00000573994 COL11A1P12107 1806 aaPredicted RBP11.79□□□□□ -0.52
RPA1-206ENST00000573994 MYH4Q9Y623 1939 aa11.78□□□□□ -0.52
RPA1-206ENST00000573994 HIP1O00291 1037 aa11.78□□□□□ -0.52
RPA1-206ENST00000573994 ZNF792Q3KQV3 632 aa11.78□□□□□ -0.52
RPA1-206ENST00000573994 HABP4Q5JVS0 413 aaKnown RBP11.78□□□□□ -0.52
RPA1-206ENST00000573994 CCDC174Q6PII3 467 aa11.78□□□□□ -0.52
RPA1-206ENST00000573994 MFSD6Q6ZSS7 791 aa11.78□□□□□ -0.52
RPA1-206ENST00000573994 GPHNQ9NQX3 736 aaPredicted RBP11.78□□□□□ -0.52
RPA1-206ENST00000573994 ZMYND8Q9ULU4 1186 aaPredicted RBP11.78□□□□□ -0.52
RPA1-206ENST00000573994 PCDHGA4Q9Y5G9 962 aa11.78□□□□□ -0.52
RPA1-206ENST00000573994 NR2E3Q9Y5X4 410 aa11.78□□□□□ -0.52
RPA1-206ENST00000573994 FRMPD2Q68DX3 1309 aaPredicted RBP11.78□□□□□ -0.52
RPA1-206ENST00000573994 ATP2A1O14983 1001 aa11.77□□□□□ -0.53
RPA1-206ENST00000573994 NT5C2P49902 561 aa11.77□□□□□ -0.53
RPA1-206ENST00000573994 FOXK1P85037 733 aa11.77□□□□□ -0.53
RPA1-206ENST00000573994 TTBK2Q6IQ55 1244 aa11.77□□□□□ -0.53
RPA1-206ENST00000573994 FAM160B2Q86V87 743 aa11.77□□□□□ -0.53
RPA1-206ENST00000573994 LENG1Q96BZ8 264 aaPredicted RBP11.77□□□□□ -0.53
RPA1-206ENST00000573994 DDX11Q96FC9 970 aa11.77□□□□□ -0.53
RPA1-206ENST00000573994 AGBL1Q96MI9 1066 aa11.77□□□□□ -0.53
RPA1-206ENST00000573994 TMEM47Q9BQJ4 181 aa11.77□□□□□ -0.53
RPA1-206ENST00000573994 ZKSCAN3Q9BRR0 538 aa11.77□□□□□ -0.53
RPA1-206ENST00000573994 TRIOBPQ9H2D6 2365 aa11.77□□□□□ -0.53
RPA1-206ENST00000573994 ZNF213O14771 459 aa11.76□□□□□ -0.53
RPA1-206ENST00000573994 SEPT4O43236 478 aa11.76□□□□□ -0.53
RPA1-206ENST00000573994 MSCO60682 206 aa11.76□□□□□ -0.53
RPA1-206ENST00000573994 NUDT7P0C024 238 aa11.76□□□□□ -0.53
RPA1-206ENST00000573994 TOP1P11387 765 aaKnown RBP11.76□□□□□ -0.53
RPA1-206ENST00000573994 PCP11498 1178 aaKnown RBP11.76□□□□□ -0.53
RPA1-206ENST00000573994 COL6A1P12109 1028 aa11.76□□□□□ -0.53
RPA1-206ENST00000573994 SLC16A2P36021 539 aa11.76□□□□□ -0.53
RPA1-206ENST00000573994 NOVP48745 357 aa11.76□□□□□ -0.53
RPA1-206ENST00000573994 GJC2Q5T442 439 aaPredicted RBP11.76□□□□□ -0.53
RPA1-206ENST00000573994 ANKRD35Q8N283 1001 aa11.76□□□□□ -0.53
RPA1-206ENST00000573994 CHURC1Q8WUH1 139 aa11.76□□□□□ -0.53
RPA1-206ENST00000573994 DCAF4Q8WV16 495 aa11.76□□□□□ -0.53
RPA1-206ENST00000573994 ESR2Q92731 530 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms