RNA–Protein interactions for RNA: ENST00000573607.5

TOM1L1-216, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 4

Gene TOM1L1, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-216ENST00000573607 SCRN1Q12765 414 aa8.69□□□□□ -1.02
TOM1L1-216ENST00000573607 ZC3H12BQ5HYM0 836 aaKnown RBP8.69□□□□□ -1.02
TOM1L1-216ENST00000573607 ZNF655Q8N720 491 aaPredicted RBP8.69□□□□□ -1.02
TOM1L1-216ENST00000573607 TMEM145Q8NBT3 493 aa8.69□□□□□ -1.02
TOM1L1-216ENST00000573607 CLUHP3Q96NS8 147 aa8.69□□□□□ -1.02
TOM1L1-216ENST00000573607 FCRL3Q96P31 734 aaPredicted RBP8.69□□□□□ -1.02
TOM1L1-216ENST00000573607 FEZ1Q99689 392 aa8.69□□□□□ -1.02
TOM1L1-216ENST00000573607 TGFB1P01137 390 aa8.68□□□□□ -1.02
TOM1L1-216ENST00000573607 FURINP09958 794 aa8.68□□□□□ -1.02
TOM1L1-216ENST00000573607 POU4F1Q01851 419 aa8.68□□□□□ -1.02
TOM1L1-216ENST00000573607 DALRD3Q5D0E6 543 aaKnown RBP8.68□□□□□ -1.02
TOM1L1-216ENST00000573607 CWF19L1Q69YN2 538 aaKnown RBP8.68□□□□□ -1.02
TOM1L1-216ENST00000573607 DENND5AQ6IQ26 1287 aa8.68□□□□□ -1.02
TOM1L1-216ENST00000573607 NETO1Q8TDF5 533 aa8.68□□□□□ -1.02
TOM1L1-216ENST00000573607 IPO9Q96P70 1041 aaKnown RBP8.68□□□□□ -1.02
TOM1L1-216ENST00000573607 SLC12A9Q9BXP2 914 aa8.68□□□□□ -1.02
TOM1L1-216ENST00000573607 FOXP3Q9BZS1 431 aa8.68□□□□□ -1.02
TOM1L1-216ENST00000573607 TRIT1Q9H3H1 467 aaKnown RBP8.68□□□□□ -1.02
TOM1L1-216ENST00000573607 NCOA5Q9HCD5 579 aaKnown RBP8.68□□□□□ -1.02
TOM1L1-216ENST00000573607 ATP13A1Q9HD20 1204 aa8.68□□□□□ -1.02
TOM1L1-216ENST00000573607 GPRC5CQ9NQ84 441 aa8.68□□□□□ -1.02
TOM1L1-216ENST00000573607 CYP26B1Q9NR63 512 aa8.68□□□□□ -1.02
TOM1L1-216ENST00000573607 SYPP08247 313 aa8.67□□□□□ -1.02
TOM1L1-216ENST00000573607 C6orf222P0C671 652 aaPredicted RBP8.67□□□□□ -1.02
TOM1L1-216ENST00000573607 FOSL1P15407 271 aa8.67□□□□□ -1.02
TOM1L1-216ENST00000573607 VAV1P15498 845 aa8.67□□□□□ -1.02
TOM1L1-216ENST00000573607 HOXC12P31275 282 aa8.67□□□□□ -1.02
TOM1L1-216ENST00000573607 NTRK3Q16288 839 aa8.67□□□□□ -1.02
TOM1L1-216ENST00000573607 IFI16Q16666 785 aaKnown RBP8.67□□□□□ -1.02
TOM1L1-216ENST00000573607 GAB4Q2WGN9 574 aa8.67□□□□□ -1.02
TOM1L1-216ENST00000573607 C1orf159Q96HA4 380 aa8.67□□□□□ -1.02
TOM1L1-216ENST00000573607 PITPNM2Q9BZ72 1349 aa8.66□□□□□ -1.02
TOM1L1-216ENST00000573607 AURKAO14965 403 aa8.66□□□□□ -1.02
TOM1L1-216ENST00000573607 FKTNO75072 461 aa8.66□□□□□ -1.02
TOM1L1-216ENST00000573607 BMP8BP34820 402 aa8.66□□□□□ -1.02
TOM1L1-216ENST00000573607 CLCN7P51798 805 aa8.66□□□□□ -1.02
TOM1L1-216ENST00000573607 SUMO1P63165 101 aaKnown RBP8.66□□□□□ -1.02
TOM1L1-216ENST00000573607 PABPC4Q13310 644 aaKnown RBP eCLIP8.66□□□□□ -1.02
TOM1L1-216ENST00000573607 CPSF6Q16630 551 aaKnown RBP eCLIP8.66□□□□□ -1.02
TOM1L1-216ENST00000573607 PRSS36Q5K4E3 855 aa8.66□□□□□ -1.02
TOM1L1-216ENST00000573607 ZPBP2Q6X784 338 aa8.66□□□□□ -1.02
TOM1L1-216ENST00000573607 DHX37Q8IY37 1157 aaKnown RBP8.66□□□□□ -1.02
TOM1L1-216ENST00000573607 DUSP13Q9UII6 198 aa8.66□□□□□ -1.02
TOM1L1-216ENST00000573607 CCDC163A0A0D9SF12 145 aa8.65□□□□□ -1.02
TOM1L1-216ENST00000573607 C2orf71A6NGG8 1288 aa8.65□□□□□ -1.02
TOM1L1-216ENST00000573607 ARNTLO00327 626 aa8.65□□□□□ -1.02
TOM1L1-216ENST00000573607 SCG5P05408 212 aa8.65□□□□□ -1.02
TOM1L1-216ENST00000573607 THBDP07204 575 aa8.65□□□□□ -1.02
TOM1L1-216ENST00000573607 GSTM1P09488 218 aa8.65□□□□□ -1.02
TOM1L1-216ENST00000573607 CD96P40200 585 aa8.65□□□□□ -1.02
TOM1L1-216ENST00000573607 RTP2Q5QGT7 225 aa8.65□□□□□ -1.02
TOM1L1-216ENST00000573607 SLC35F1Q5T1Q4 408 aa8.65□□□□□ -1.02
TOM1L1-216ENST00000573607 THAP5Q7Z6K1 395 aa8.65□□□□□ -1.02
TOM1L1-216ENST00000573607 FILIP1Q7Z7B0 1213 aa8.65□□□□□ -1.02
TOM1L1-216ENST00000573607 CREG2Q8IUH2 290 aa8.65□□□□□ -1.02
TOM1L1-216ENST00000573607 KREMEN2Q8NCW0 462 aa8.65□□□□□ -1.02
TOM1L1-216ENST00000573607 KCTD13Q8WZ19 329 aa8.65□□□□□ -1.02
TOM1L1-216ENST00000573607 COPS5Q92905 334 aa8.65□□□□□ -1.02
TOM1L1-216ENST00000573607 GPATCH3Q96I76 525 aa8.65□□□□□ -1.02
TOM1L1-216ENST00000573607 SLKQ9H2G2 1235 aaPredicted RBP8.65□□□□□ -1.02
TOM1L1-216ENST00000573607 SEMA6BQ9H3T3 888 aa8.65□□□□□ -1.02
TOM1L1-216ENST00000573607 TMEFF2Q9UIK5 374 aaPredicted RBP8.65□□□□□ -1.02
TOM1L1-216ENST00000573607 TCFL5Q9UL49 500 aa8.65□□□□□ -1.02
TOM1L1-216ENST00000573607 PCDHA11Q9Y5I1 949 aa8.65□□□□□ -1.02
TOM1L1-216ENST00000573607 TMEM265A0A087WTH1 108 aa8.64□□□□□ -1.03
TOM1L1-216ENST00000573607 IRS4O14654 1257 aaPredicted RBP8.64□□□□□ -1.03
TOM1L1-216ENST00000573607 PLD2O14939 933 aa8.64□□□□□ -1.03
TOM1L1-216ENST00000573607 ZNF205O95201 554 aa8.64□□□□□ -1.03
TOM1L1-216ENST00000573607 ESR1P03372 595 aa8.64□□□□□ -1.03
TOM1L1-216ENST00000573607 MAP4K2Q12851 820 aa8.64□□□□□ -1.03
TOM1L1-216ENST00000573607 SYNPOQ8N3V7 929 aa8.64□□□□□ -1.03
TOM1L1-216ENST00000573607 LINC00116Q8NCU8 138 aa8.64□□□□□ -1.03
TOM1L1-216ENST00000573607 SLC7A14Q8TBB6 771 aa8.64□□□□□ -1.03
TOM1L1-216ENST00000573607 FRS2Q8WU20 508 aa8.64□□□□□ -1.03
TOM1L1-216ENST00000573607 AP5S1Q9NUS5 200 aa8.64□□□□□ -1.03
TOM1L1-216ENST00000573607 IFT57Q9NWB7 429 aa8.64□□□□□ -1.03
TOM1L1-216ENST00000573607 SNX11Q9Y5W9 270 aa8.64□□□□□ -1.03
TOM1L1-216ENST00000573607 BACE2Q9Y5Z0 518 aa8.64□□□□□ -1.03
TOM1L1-216ENST00000573607 LTKP29376 864 aa8.63□□□□□ -1.03
TOM1L1-216ENST00000573607 PCBP3P57721 371 aaKnown RBP8.63□□□□□ -1.03
TOM1L1-216ENST00000573607 BNIP3Q12983 259 aa8.63□□□□□ -1.03
TOM1L1-216ENST00000573607 AOC3Q16853 763 aa8.63□□□□□ -1.03
TOM1L1-216ENST00000573607 USP53Q70EK8 1073 aa8.63□□□□□ -1.03
TOM1L1-216ENST00000573607 CCDC140Q96MF4 163 aa8.63□□□□□ -1.03
TOM1L1-216ENST00000573607 SLC52A2Q9HAB3 445 aa8.63□□□□□ -1.03
TOM1L1-216ENST00000573607 NDOR1Q9UHB4 597 aa8.63□□□□□ -1.03
TOM1L1-216ENST00000573607 TRAF6Q9Y4K3 522 aa8.63□□□□□ -1.03
TOM1L1-216ENST00000573607 ASXL2Q76L83 1435 aa8.63□□□□□ -1.03
TOM1L1-216ENST00000573607 DNAJC25-GNG10A0A024R161 153 aa8.62□□□□□ -1.03
TOM1L1-216ENST00000573607 SSU72P8A0A1W2PR75 194 aa8.62□□□□□ -1.03
TOM1L1-216ENST00000573607 CPP00450 1065 aa8.62□□□□□ -1.03
TOM1L1-216ENST00000573607 SDSP20132 328 aa8.62□□□□□ -1.03
TOM1L1-216ENST00000573607 NOP2P46087 812 aaKnown RBP8.62□□□□□ -1.03
TOM1L1-216ENST00000573607 MASP1P48740 699 aa8.62□□□□□ -1.03
TOM1L1-216ENST00000573607 KCNT2Q6UVM3 1135 aa8.62□□□□□ -1.03
TOM1L1-216ENST00000573607 SLC51AQ86UW1 340 aa8.62□□□□□ -1.03
TOM1L1-216ENST00000573607 NPLOC4Q8TAT6 608 aa8.62□□□□□ -1.03
TOM1L1-216ENST00000573607 NINJ1Q92982 152 aa8.62□□□□□ -1.03
TOM1L1-216ENST00000573607 HRASLS5Q96KN8 279 aa8.62□□□□□ -1.03
TOM1L1-216ENST00000573607 PUS7Q96PZ0 661 aaKnown RBP8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms