RNA–Protein interactions for RNA: ENST00000573325.1

ABR-220, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 3

Gene ABR, Length 471 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-220ENST00000573325 ACVR2BQ13705 512 aa13.11□□□□□ -0.31
ABR-220ENST00000573325 RNF180Q86T96 592 aa13.11□□□□□ -0.31
ABR-220ENST00000573325 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.11□□□□□ -0.31
ABR-220ENST00000573325 LRRC47Q8N1G4 583 aaKnown RBP13.11□□□□□ -0.31
ABR-220ENST00000573325 CHMP4BQ9H444 224 aaKnown RBP13.11□□□□□ -0.31
ABR-220ENST00000573325 A1CFQ9NQ94 594 aaKnown RBP13.11□□□□□ -0.31
ABR-220ENST00000573325 FEM1BQ9UK73 627 aa13.11□□□□□ -0.31
ABR-220ENST00000573325 NCOR1O75376 2440 aa13.11□□□□□ -0.31
ABR-220ENST00000573325 ELP1O95163 1332 aa13.11□□□□□ -0.31
ABR-220ENST00000573325 TTC41PQ6P2S7 1318 aa13.11□□□□□ -0.31
ABR-220ENST00000573325 LCTP09848 1927 aa13.1□□□□□ -0.31
ABR-220ENST00000573325 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.1□□□□□ -0.31
ABR-220ENST00000573325 MOXD2PA6NHM9 499 aa13.1□□□□□ -0.31
ABR-220ENST00000573325 NMT2O60551 498 aa13.1□□□□□ -0.31
ABR-220ENST00000573325 TTLL1O95922 423 aa13.1□□□□□ -0.31
ABR-220ENST00000573325 GNAT2P19087 354 aa13.1□□□□□ -0.31
ABR-220ENST00000573325 CCDC144BQ3MJ40 725 aa13.1□□□□□ -0.31
ABR-220ENST00000573325 VPS53Q5VIR6 699 aa13.1□□□□□ -0.31
ABR-220ENST00000573325 FAM126BQ8IXS8 530 aa13.1□□□□□ -0.31
ABR-220ENST00000573325 CHST13Q8NET6 341 aa13.1□□□□□ -0.31
ABR-220ENST00000573325 MORC4Q8TE76 937 aa13.1□□□□□ -0.31
ABR-220ENST00000573325 AGBL1Q96MI9 1066 aa13.1□□□□□ -0.31
ABR-220ENST00000573325 PRDM5Q9NQX1 630 aaPredicted RBP13.1□□□□□ -0.31
ABR-220ENST00000573325 ANAPC4Q9UJX5 808 aa13.1□□□□□ -0.31
ABR-220ENST00000573325 FAM184BQ9ULE4 1060 aa13.1□□□□□ -0.31
ABR-220ENST00000573325 PQBP1O60828 265 aaKnown RBP13.09□□□□□ -0.31
ABR-220ENST00000573325 TIMP1P01033 207 aa13.09□□□□□ -0.31
ABR-220ENST00000573325 PPARAQ07869 468 aa13.09□□□□□ -0.31
ABR-220ENST00000573325 TAPT1Q6NXT6 567 aa13.09□□□□□ -0.31
ABR-220ENST00000573325 ARMCX2Q7L311 632 aa13.09□□□□□ -0.31
ABR-220ENST00000573325 AMOTL1Q8IY63 956 aa13.09□□□□□ -0.31
ABR-220ENST00000573325 CCDC144CPQ8IYA2 1237 aa13.09□□□□□ -0.31
ABR-220ENST00000573325 CPXCR1Q8N123 301 aa13.09□□□□□ -0.31
ABR-220ENST00000573325 USP38Q8NB14 1042 aa13.09□□□□□ -0.31
ABR-220ENST00000573325 MYLIPQ8WY64 445 aa13.09□□□□□ -0.31
ABR-220ENST00000573325 KIFC2Q96AC6 838 aa13.09□□□□□ -0.31
ABR-220ENST00000573325 DDRGK1Q96HY6 314 aa13.09□□□□□ -0.31
ABR-220ENST00000573325 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.09□□□□□ -0.31
ABR-220ENST00000573325 ABHD16BQ9H3Z7 469 aa13.09□□□□□ -0.31
ABR-220ENST00000573325 MKNK2Q9HBH9 465 aa13.09□□□□□ -0.31
ABR-220ENST00000573325 LRRC37A2A6NM11 1700 aa13.08□□□□□ -0.32
ABR-220ENST00000573325 MYH4Q9Y623 1939 aa13.08□□□□□ -0.32
ABR-220ENST00000573325 TMEM265A0A087WTH1 108 aa13.08□□□□□ -0.32
ABR-220ENST00000573325 ASGR1P07306 291 aa13.08□□□□□ -0.32
ABR-220ENST00000573325 BMP3P12645 472 aa13.08□□□□□ -0.32
ABR-220ENST00000573325 TFAP4Q01664 338 aa13.08□□□□□ -0.32
ABR-220ENST00000573325 GRIN2CQ14957 1233 aa13.08□□□□□ -0.32
ABR-220ENST00000573325 MUM1L1Q5H9M0 696 aa13.08□□□□□ -0.32
ABR-220ENST00000573325 TMEM240Q5SV17 173 aa13.08□□□□□ -0.32
ABR-220ENST00000573325 ZNF697Q5TEC3 545 aa13.08□□□□□ -0.32
ABR-220ENST00000573325 SLFN13Q68D06 897 aa13.08□□□□□ -0.32
ABR-220ENST00000573325 CCDC129Q6ZRS4 1044 aa13.08□□□□□ -0.32
ABR-220ENST00000573325 PURBQ96QR8 312 aaKnown RBP13.08□□□□□ -0.32
ABR-220ENST00000573325 PRKAG2Q9UGJ0 569 aa13.08□□□□□ -0.32
ABR-220ENST00000573325 CNPY2Q9Y2B0 182 aa13.08□□□□□ -0.32
ABR-220ENST00000573325 ARVCFO00192 962 aa13.07□□□□□ -0.32
ABR-220ENST00000573325 ZBED4O75132 1171 aa13.07□□□□□ -0.32
ABR-220ENST00000573325 MYCNP04198 464 aaPredicted RBP13.07□□□□□ -0.32
ABR-220ENST00000573325 ALX1Q15699 326 aa13.07□□□□□ -0.32
ABR-220ENST00000573325 RCSD1Q6JBY9 416 aa13.07□□□□□ -0.32
ABR-220ENST00000573325 MFSD5Q6N075 450 aa13.07□□□□□ -0.32
ABR-220ENST00000573325 BTNL9Q6UXG8 535 aa13.07□□□□□ -0.32
ABR-220ENST00000573325 ZNF444Q8N0Y2 327 aaPredicted RBP13.07□□□□□ -0.32
ABR-220ENST00000573325 STAG1Q8WVM7 1258 aa13.07□□□□□ -0.32
ABR-220ENST00000573325 DDX11Q96FC9 970 aa13.07□□□□□ -0.32
ABR-220ENST00000573325 STARD7Q9NQZ5 370 aa13.07□□□□□ -0.32
ABR-220ENST00000573325 PDGFCQ9NRA1 345 aa13.07□□□□□ -0.32
ABR-220ENST00000573325 TMEM39AQ9NV64 488 aa13.07□□□□□ -0.32
ABR-220ENST00000573325 FBXO40Q9UH90 709 aa13.07□□□□□ -0.32
ABR-220ENST00000573325 TMEM232C9JQI7 657 aa13.06□□□□□ -0.32
ABR-220ENST00000573325 ORC4O43929 436 aa13.06□□□□□ -0.32
ABR-220ENST00000573325 FDX1P10109 184 aa13.06□□□□□ -0.32
ABR-220ENST00000573325 RAG1P15918 1043 aa13.06□□□□□ -0.32
ABR-220ENST00000573325 SMPD1P17405 629 aa13.06□□□□□ -0.32
ABR-220ENST00000573325 MCCP23508 829 aa13.06□□□□□ -0.32
ABR-220ENST00000573325 TDO2P48775 406 aa13.06□□□□□ -0.32
ABR-220ENST00000573325 SNAP25P60880 206 aa13.06□□□□□ -0.32
ABR-220ENST00000573325 FPGSQ05932 587 aa13.06□□□□□ -0.32
ABR-220ENST00000573325 CTDSPL2Q05D32 466 aa13.06□□□□□ -0.32
ABR-220ENST00000573325 MAFAQ8NHW3 353 aaPredicted RBP13.06□□□□□ -0.32
ABR-220ENST00000573325 CYP39A1Q9NYL5 469 aa13.06□□□□□ -0.32
ABR-220ENST00000573325 ZHX1Q9UKY1 873 aaPredicted RBP13.06□□□□□ -0.32
ABR-220ENST00000573325 PRR12Q9ULL5 1215 aa13.06□□□□□ -0.32
ABR-220ENST00000573325 UMODL1Q5DID0 1318 aa13.06□□□□□ -0.32
ABR-220ENST00000573325 GRXCR1A8MXD5 290 aa13.05□□□□□ -0.32
ABR-220ENST00000573325 RAD21O60216 631 aa13.05□□□□□ -0.32
ABR-220ENST00000573325 CSF2RAP15509 400 aa13.05□□□□□ -0.32
ABR-220ENST00000573325 DNAJB2P25686 324 aa13.05□□□□□ -0.32
ABR-220ENST00000573325 PBX2P40425 430 aa13.05□□□□□ -0.32
ABR-220ENST00000573325 STAT2P52630 851 aa13.05□□□□□ -0.32
ABR-220ENST00000573325 BEX3Q00994 111 aa13.05□□□□□ -0.32
ABR-220ENST00000573325 POTEDQ86YR6 584 aa13.05□□□□□ -0.32
ABR-220ENST00000573325 NUP133Q8WUM0 1156 aa13.05□□□□□ -0.32
ABR-220ENST00000573325 CLEC4DQ8WXI8 215 aa13.05□□□□□ -0.32
ABR-220ENST00000573325 RNPC3Q96LT9 517 aaKnown RBP13.05□□□□□ -0.32
ABR-220ENST00000573325 RNF146Q9NTX7 359 aa13.05□□□□□ -0.32
ABR-220ENST00000573325 CXXC1Q9P0U4 656 aaPredicted RBP13.05□□□□□ -0.32
ABR-220ENST00000573325 RBM47A0AV96 593 aaKnown RBP13.04□□□□□ -0.32
ABR-220ENST00000573325 C6orf222P0C671 652 aaPredicted RBP13.04□□□□□ -0.32
ABR-220ENST00000573325 MX1P20591 662 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms