RNA–Protein interactions for RNA: ENST00000572656.2

TRAPPC1-205, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-205ENST00000572656 PATL2C9JE40 543 aaKnown RBP11.76□□□□□ -0.53
TRAPPC1-205ENST00000572656 M0R2C6 588 aa11.76□□□□□ -0.53
TRAPPC1-205ENST00000572656 ARVCFO00192 962 aa11.76□□□□□ -0.53
TRAPPC1-205ENST00000572656 BMP3P12645 472 aa11.76□□□□□ -0.53
TRAPPC1-205ENST00000572656 NKX3-2P78367 333 aa11.76□□□□□ -0.53
TRAPPC1-205ENST00000572656 IRX5P78411 483 aaPredicted RBP11.76□□□□□ -0.53
TRAPPC1-205ENST00000572656 LRRFIP1Q32MZ4 808 aaKnown RBP11.76□□□□□ -0.53
TRAPPC1-205ENST00000572656 GNASQ5JWF2 1037 aa11.76□□□□□ -0.53
TRAPPC1-205ENST00000572656 C20orf194Q5TEA3 1177 aa11.76□□□□□ -0.53
TRAPPC1-205ENST00000572656 DIEXFQ68CQ4 756 aaKnown RBP11.76□□□□□ -0.53
TRAPPC1-205ENST00000572656 SLFN13Q68D06 897 aa11.76□□□□□ -0.53
TRAPPC1-205ENST00000572656 C16orf59Q7L2K0 433 aa11.76□□□□□ -0.53
TRAPPC1-205ENST00000572656 CCDC144CPQ8IYA2 1237 aa11.76□□□□□ -0.53
TRAPPC1-205ENST00000572656 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.76□□□□□ -0.53
TRAPPC1-205ENST00000572656 DCTPP1Q9H773 170 aa11.76□□□□□ -0.53
TRAPPC1-205ENST00000572656 TMEM232C9JQI7 657 aa11.75□□□□□ -0.53
TRAPPC1-205ENST00000572656 CTAGE5O15320 804 aa11.75□□□□□ -0.53
TRAPPC1-205ENST00000572656 PDE4BQ07343 736 aa11.75□□□□□ -0.53
TRAPPC1-205ENST00000572656 TMEM240Q5SV17 173 aa11.75□□□□□ -0.53
TRAPPC1-205ENST00000572656 RASIP1Q5U651 963 aa11.75□□□□□ -0.53
TRAPPC1-205ENST00000572656 TSHZ3Q63HK5 1081 aa11.75□□□□□ -0.53
TRAPPC1-205ENST00000572656 IFNL3Q8IZI9 196 aa11.75□□□□□ -0.53
TRAPPC1-205ENST00000572656 LRRC47Q8N1G4 583 aaKnown RBP11.75□□□□□ -0.53
TRAPPC1-205ENST00000572656 TMEM199Q8N511 208 aa11.75□□□□□ -0.53
TRAPPC1-205ENST00000572656 FAM133AQ8N9E0 248 aa11.75□□□□□ -0.53
TRAPPC1-205ENST00000572656 NEDD1Q8NHV4 660 aa11.75□□□□□ -0.53
TRAPPC1-205ENST00000572656 SYMPKQ92797 1274 aaKnown RBP11.75□□□□□ -0.53
TRAPPC1-205ENST00000572656 TIFAQ96CG3 184 aa11.75□□□□□ -0.53
TRAPPC1-205ENST00000572656 NACAP1Q9BZK3 213 aa11.75□□□□□ -0.53
TRAPPC1-205ENST00000572656 KATNBL1Q9H079 304 aa11.75□□□□□ -0.53
TRAPPC1-205ENST00000572656 ZNF576Q9H609 170 aa11.75□□□□□ -0.53
TRAPPC1-205ENST00000572656 PARP14Q460N5 1801 aa11.74□□□□□ -0.53
TRAPPC1-205ENST00000572656 TLR3O15455 904 aaKnown RBP11.74□□□□□ -0.53
TRAPPC1-205ENST00000572656 SLC3A2P08195 630 aaKnown RBP11.74□□□□□ -0.53
TRAPPC1-205ENST00000572656 TSPY3P0CV98 308 aa11.74□□□□□ -0.53
TRAPPC1-205ENST00000572656 TSPY8P0CW00 308 aa11.74□□□□□ -0.53
TRAPPC1-205ENST00000572656 CSF2RAP15509 400 aa11.74□□□□□ -0.53
TRAPPC1-205ENST00000572656 STAT2P52630 851 aa11.74□□□□□ -0.53
TRAPPC1-205ENST00000572656 TFAP4Q01664 338 aa11.74□□□□□ -0.53
TRAPPC1-205ENST00000572656 CNTN2Q02246 1040 aa11.74□□□□□ -0.53
TRAPPC1-205ENST00000572656 TNFAIP2Q03169 654 aa11.74□□□□□ -0.53
TRAPPC1-205ENST00000572656 FAM160B2Q86V87 743 aa11.74□□□□□ -0.53
TRAPPC1-205ENST00000572656 FAM126BQ8IXS8 530 aa11.74□□□□□ -0.53
TRAPPC1-205ENST00000572656 CHURC1Q8WUH1 139 aa11.74□□□□□ -0.53
TRAPPC1-205ENST00000572656 STAG1Q8WVM7 1258 aa11.74□□□□□ -0.53
TRAPPC1-205ENST00000572656 GMCL1Q96IK5 515 aa11.74□□□□□ -0.53
TRAPPC1-205ENST00000572656 ACAD9Q9H845 621 aa11.74□□□□□ -0.53
TRAPPC1-205ENST00000572656 HOMER2Q9NSB8 354 aa11.74□□□□□ -0.53
TRAPPC1-205ENST00000572656 PLIN4Q96Q06 1357 aa11.74□□□□□ -0.53
TRAPPC1-205ENST00000572656 BAZ2AQ9UIF9 1905 aaKnown RBP11.74□□□□□ -0.53
TRAPPC1-205ENST00000572656 ASB14A6NK59 587 aa11.73□□□□□ -0.53
TRAPPC1-205ENST00000572656 ZNF536O15090 1300 aa11.73□□□□□ -0.53
TRAPPC1-205ENST00000572656 PLA2G6O60733 806 aa11.73□□□□□ -0.53
TRAPPC1-205ENST00000572656 CABYRO75952 493 aa11.73□□□□□ -0.53
TRAPPC1-205ENST00000572656 CD4P01730 458 aa11.73□□□□□ -0.53
TRAPPC1-205ENST00000572656 TKFCQ3LXA3 575 aa11.73□□□□□ -0.53
TRAPPC1-205ENST00000572656 PPP4R3BQ5MIZ7 849 aa11.73□□□□□ -0.53
TRAPPC1-205ENST00000572656 EYSQ5T1H1 3165 aa11.73□□□□□ -0.53
TRAPPC1-205ENST00000572656 PSRC1Q6PGN9 363 aaPredicted RBP11.73□□□□□ -0.53
TRAPPC1-205ENST00000572656 ZNF365Q70YC5 407 aa11.73□□□□□ -0.53
TRAPPC1-205ENST00000572656 NOL8Q76FK4 1167 aaKnown RBP11.73□□□□□ -0.53
TRAPPC1-205ENST00000572656 SLC43A3Q8NBI5 491 aa11.73□□□□□ -0.53
TRAPPC1-205ENST00000572656 AGBL1Q96MI9 1066 aa11.73□□□□□ -0.53
TRAPPC1-205ENST00000572656 PBX4Q9BYU1 374 aa11.73□□□□□ -0.53
TRAPPC1-205ENST00000572656 GREB1LQ9C091 1923 aaPredicted RBP11.73□□□□□ -0.53
TRAPPC1-205ENST00000572656 RNF146Q9NTX7 359 aa11.73□□□□□ -0.53
TRAPPC1-205ENST00000572656 ISY1Q9ULR0 285 aaKnown RBP11.73□□□□□ -0.53
TRAPPC1-205ENST00000572656 SPTBN5Q9NRC6 3674 aaKnown RBP11.73□□□□□ -0.53
TRAPPC1-205ENST00000572656 ASTN1O14525 1302 aa11.72□□□□□ -0.53
TRAPPC1-205ENST00000572656 TTC41PQ6P2S7 1318 aa11.72□□□□□ -0.53
TRAPPC1-205ENST00000572656 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.72□□□□□ -0.53
TRAPPC1-205ENST00000572656 SOWAHBA6NEL2 793 aa11.72□□□□□ -0.53
TRAPPC1-205ENST00000572656 GRXCR1A8MXD5 290 aa11.72□□□□□ -0.53
TRAPPC1-205ENST00000572656 ACRP10323 421 aa11.72□□□□□ -0.53
TRAPPC1-205ENST00000572656 MCCP23508 829 aa11.72□□□□□ -0.53
TRAPPC1-205ENST00000572656 PBX2P40425 430 aa11.72□□□□□ -0.53
TRAPPC1-205ENST00000572656 SLC1A4P43007 532 aa11.72□□□□□ -0.53
TRAPPC1-205ENST00000572656 BEX3Q00994 111 aa11.72□□□□□ -0.53
TRAPPC1-205ENST00000572656 PPARAQ07869 468 aa11.72□□□□□ -0.53
TRAPPC1-205ENST00000572656 IKQ13123 557 aaPredicted RBP11.72□□□□□ -0.53
TRAPPC1-205ENST00000572656 CCDC129Q6ZRS4 1044 aa11.72□□□□□ -0.53
TRAPPC1-205ENST00000572656 USP38Q8NB14 1042 aa11.72□□□□□ -0.53
TRAPPC1-205ENST00000572656 TRERF1Q96PN7 1200 aa11.72□□□□□ -0.53
TRAPPC1-205ENST00000572656 SEC62Q99442 399 aaKnown RBP11.72□□□□□ -0.53
TRAPPC1-205ENST00000572656 SEZ6LQ9BYH1 1024 aa11.72□□□□□ -0.53
TRAPPC1-205ENST00000572656 PPP1R12CQ9BZL4 782 aa11.72□□□□□ -0.53
TRAPPC1-205ENST00000572656 NAPBQ9H115 298 aa11.72□□□□□ -0.53
TRAPPC1-205ENST00000572656 IL23AQ9NPF7 189 aa11.72□□□□□ -0.53
TRAPPC1-205ENST00000572656 A1CFQ9NQ94 594 aaKnown RBP11.72□□□□□ -0.53
TRAPPC1-205ENST00000572656 PRDM6Q9NQX0 595 aa11.72□□□□□ -0.53
TRAPPC1-205ENST00000572656 GNEQ9Y223 722 aaKnown RBP11.72□□□□□ -0.53
TRAPPC1-205ENST00000572656 VCANP13611 3396 aa11.72□□□□□ -0.53
TRAPPC1-205ENST00000572656 COL11A1P12107 1806 aaPredicted RBP11.72□□□□□ -0.53
TRAPPC1-205ENST00000572656 MYH8P13535 1937 aa11.71□□□□□ -0.53
TRAPPC1-205ENST00000572656 ERC2O15083 957 aa11.71□□□□□ -0.53
TRAPPC1-205ENST00000572656 ALAS1P13196 640 aa11.71□□□□□ -0.53
TRAPPC1-205ENST00000572656 CYP2C18P33260 490 aa11.71□□□□□ -0.53
TRAPPC1-205ENST00000572656 FSCN1Q16658 493 aaKnown RBP11.71□□□□□ -0.53
TRAPPC1-205ENST00000572656 TJAP1Q5JTD0 557 aa11.71□□□□□ -0.53
TRAPPC1-205ENST00000572656 ZMYM1Q5SVZ6 1142 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms