RNA–Protein interactions for RNA: ENST00000572438.1

CHRNE-202, Transcript of cholinergic receptor nicotinic epsilon subunit, humanhuman

TSL 5

Gene CHRNE, Length 1,847 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNE-202ENST00000572438 TMEM232C9JQI7 657 aa23.45■■□□□ 1.34
CHRNE-202ENST00000572438 YBX3P16989 372 aaKnown RBP eCLIP23.45■■□□□ 1.34
CHRNE-202ENST00000572438 TYRO3Q06418 890 aa23.45■■□□□ 1.34
CHRNE-202ENST00000572438 PTGDRQ13258 359 aa23.45■■□□□ 1.34
CHRNE-202ENST00000572438 QRICH1Q2TAL8 776 aa23.45■■□□□ 1.34
CHRNE-202ENST00000572438 ANGEL2Q5VTE6 544 aaKnown RBP23.45■■□□□ 1.34
CHRNE-202ENST00000572438 BTNL9Q6UXG8 535 aa23.45■■□□□ 1.34
CHRNE-202ENST00000572438 TIGD1Q96MW7 591 aa23.45■■□□□ 1.34
CHRNE-202ENST00000572438 SDF4Q9BRK5 362 aa23.45■■□□□ 1.34
CHRNE-202ENST00000572438 FAM13BQ9NYF5 915 aa23.45■■□□□ 1.34
CHRNE-202ENST00000572438 MCM7P33993 719 aa23.45■■□□□ 1.34
CHRNE-202ENST00000572438 NONOQ15233 471 aaKnown RBP eCLIP23.45■■□□□ 1.34
CHRNE-202ENST00000572438 CDC37Q16543 378 aaPredicted RBP23.45■■□□□ 1.34
CHRNE-202ENST00000572438 INF2Q27J81 1249 aa23.45■■□□□ 1.34
CHRNE-202ENST00000572438 SPICE1Q8N0Z3 855 aa23.45■■□□□ 1.34
CHRNE-202ENST00000572438 RNF181Q9P0P0 153 aa23.45■■□□□ 1.34
CHRNE-202ENST00000572438 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.45■■□□□ 1.34
CHRNE-202ENST00000572438 KCNH3Q9ULD8 1083 aa23.45■■□□□ 1.34
CHRNE-202ENST00000572438 SBF1O95248 1867 aa23.44■■□□□ 1.34
CHRNE-202ENST00000572438 EPS15P42566 896 aa23.44■■□□□ 1.34
CHRNE-202ENST00000572438 SYDE2Q5VT97 1194 aa23.44■■□□□ 1.34
CHRNE-202ENST00000572438 SASS6Q6UVJ0 657 aa23.44■■□□□ 1.34
CHRNE-202ENST00000572438 CSRNP2Q9H175 543 aa23.44■■□□□ 1.34
CHRNE-202ENST00000572438 RIC8AQ9NPQ8 531 aa23.44■■□□□ 1.34
CHRNE-202ENST00000572438 GINM1Q9NU53 330 aa23.44■■□□□ 1.34
CHRNE-202ENST00000572438 IKQ13123 557 aaPredicted RBP23.43■■□□□ 1.34
CHRNE-202ENST00000572438 KIAA1755Q5JYT7 1200 aa23.43■■□□□ 1.34
CHRNE-202ENST00000572438 SPECC1Q5M775 1068 aa23.43■■□□□ 1.34
CHRNE-202ENST00000572438 VCPKMTQ9H867 229 aa23.43■■□□□ 1.34
CHRNE-202ENST00000572438 BIN2Q9UBW5 565 aaPredicted RBP23.43■■□□□ 1.34
CHRNE-202ENST00000572438 NBPF12Q5TAG4 269 aaPredicted RBP23.43■■□□□ 1.34
CHRNE-202ENST00000572438 CTNND1O60716 968 aaKnown RBP23.42■■□□□ 1.34
CHRNE-202ENST00000572438 DCAF15Q66K64 600 aa23.42■■□□□ 1.34
CHRNE-202ENST00000572438 HOOK2Q96ED9 719 aa23.42■■□□□ 1.34
CHRNE-202ENST00000572438 DDNO94850 711 aaPredicted RBP23.41■■□□□ 1.34
CHRNE-202ENST00000572438 MRPL12P52815 198 aaKnown RBP23.41■■□□□ 1.34
CHRNE-202ENST00000572438 HIRAP54198 1017 aaPredicted RBP23.41■■□□□ 1.34
CHRNE-202ENST00000572438 JAKMIP3Q5VZ66 844 aa23.41■■□□□ 1.34
CHRNE-202ENST00000572438 ARL6IP4Q66PJ3 421 aaKnown RBP23.41■■□□□ 1.34
CHRNE-202ENST00000572438 C4orf32Q8N8J7 132 aa23.41■■□□□ 1.34
CHRNE-202ENST00000572438 CUL5Q93034 780 aa23.41■■□□□ 1.34
CHRNE-202ENST00000572438 TMEM260Q9NX78 707 aa23.41■■□□□ 1.34
CHRNE-202ENST00000572438 GGA3Q9NZ52 723 aa23.41■■□□□ 1.34
CHRNE-202ENST00000572438 PCDHA1Q9Y5I3 950 aa23.41■■□□□ 1.34
CHRNE-202ENST00000572438 STAT2P52630 851 aa23.4■■□□□ 1.34
CHRNE-202ENST00000572438 FAM83BQ5T0W9 1011 aa23.4■■□□□ 1.34
CHRNE-202ENST00000572438 AMNQ9BXJ7 453 aa23.4■■□□□ 1.34
CHRNE-202ENST00000572438 GLIS2Q9BZE0 524 aaPredicted RBP23.4■■□□□ 1.34
CHRNE-202ENST00000572438 GLT8D2Q9H1C3 349 aa23.4■■□□□ 1.34
CHRNE-202ENST00000572438 NEK8Q86SG6 692 aa23.4■■□□□ 1.34
CHRNE-202ENST00000572438 ANP32BQ92688 251 aaKnown RBP23.4■■□□□ 1.34
CHRNE-202ENST00000572438 ZNF341Q9BYN7 854 aa23.4■■□□□ 1.34
CHRNE-202ENST00000572438 PSTPIP2Q9H939 334 aa23.4■■□□□ 1.34
CHRNE-202ENST00000572438 PRR12Q9ULL5 1215 aa23.4■■□□□ 1.34
CHRNE-202ENST00000572438 PPP2R3BQ9Y5P8 575 aa23.4■■□□□ 1.34
CHRNE-202ENST00000572438 VWA3AA6NCI4 1184 aa23.39■■□□□ 1.33
CHRNE-202ENST00000572438 CLK2P49760 499 aaKnown RBP23.39■■□□□ 1.33
CHRNE-202ENST00000572438 ZYXQ15942 572 aaKnown RBP23.39■■□□□ 1.33
CHRNE-202ENST00000572438 UVSSAQ2YD98 709 aa23.39■■□□□ 1.33
CHRNE-202ENST00000572438 C9orf131Q5VYM1 1079 aa23.39■■□□□ 1.33
CHRNE-202ENST00000572438 CCDC84Q86UT8 332 aaPredicted RBP23.39■■□□□ 1.33
CHRNE-202ENST00000572438 TBCKQ8TEA7 893 aa23.39■■□□□ 1.33
CHRNE-202ENST00000572438 LAD1O00515 517 aa23.38■■□□□ 1.33
CHRNE-202ENST00000572438 LMOD1P29536 600 aaPredicted RBP23.38■■□□□ 1.33
CHRNE-202ENST00000572438 KRBA2Q6ZNG9 492 aa23.38■■□□□ 1.33
CHRNE-202ENST00000572438 FBXO11Q86XK2 927 aa23.38■■□□□ 1.33
CHRNE-202ENST00000572438 PLA2G6O60733 806 aa23.38■■□□□ 1.33
CHRNE-202ENST00000572438 SNAP25P60880 206 aa23.38■■□□□ 1.33
CHRNE-202ENST00000572438 ORC2Q13416 577 aaPredicted RBP23.38■■□□□ 1.33
CHRNE-202ENST00000572438 LETM2Q2VYF4 491 aa23.38■■□□□ 1.33
CHRNE-202ENST00000572438 LONRF3Q496Y0 759 aa23.38■■□□□ 1.33
CHRNE-202ENST00000572438 ANO6Q4KMQ2 910 aa23.38■■□□□ 1.33
CHRNE-202ENST00000572438 USP49Q70CQ1 688 aa23.38■■□□□ 1.33
CHRNE-202ENST00000572438 CHURC1Q8WUH1 139 aa23.38■■□□□ 1.33
CHRNE-202ENST00000572438 FEZ1Q99689 392 aa23.38■■□□□ 1.33
CHRNE-202ENST00000572438 KIAA1468Q9P260 1216 aa23.38■■□□□ 1.33
CHRNE-202ENST00000572438 ZNF112Q9UJU3 913 aa23.38■■□□□ 1.33
CHRNE-202ENST00000572438 IL17AQ16552 155 aa23.37■■□□□ 1.33
CHRNE-202ENST00000572438 STX1AQ16623 288 aa23.37■■□□□ 1.33
CHRNE-202ENST00000572438 UBE2SQ16763 222 aa23.37■■□□□ 1.33
CHRNE-202ENST00000572438 ELOA2Q8IYF1 753 aaPredicted RBP23.37■■□□□ 1.33
CHRNE-202ENST00000572438 FAM200AQ8TCP9 573 aa23.37■■□□□ 1.33
CHRNE-202ENST00000572438 SYMPKQ92797 1274 aaKnown RBP23.37■■□□□ 1.33
CHRNE-202ENST00000572438 ADARB2Q9NS39 739 aaKnown RBP23.37■■□□□ 1.33
CHRNE-202ENST00000572438 POLR2DO15514 142 aaKnown RBP23.36■■□□□ 1.33
CHRNE-202ENST00000572438 CAVIN2O95810 425 aa23.36■■□□□ 1.33
CHRNE-202ENST00000572438 INPP5BP32019 993 aa23.36■■□□□ 1.33
CHRNE-202ENST00000572438 FAM160B2Q86V87 743 aa23.36■■□□□ 1.33
CHRNE-202ENST00000572438 CNNM3Q8NE01 707 aa23.36■■□□□ 1.33
CHRNE-202ENST00000572438 ERCC4Q92889 916 aaPredicted RBP23.36■■□□□ 1.33
CHRNE-202ENST00000572438 EPSTI1Q96J88 318 aa23.36■■□□□ 1.33
CHRNE-202ENST00000572438 PITPNM2Q9BZ72 1349 aa23.36■■□□□ 1.33
CHRNE-202ENST00000572438 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23.36■■□□□ 1.33
CHRNE-202ENST00000572438 CCNT1O60563 726 aaKnown RBP23.36■■□□□ 1.33
CHRNE-202ENST00000572438 LONP1P36776 959 aaKnown RBP23.36■■□□□ 1.33
CHRNE-202ENST00000572438 PRPHP41219 470 aa23.36■■□□□ 1.33
CHRNE-202ENST00000572438 PRAMEF18Q5VWM3 479 aa23.36■■□□□ 1.33
CHRNE-202ENST00000572438 TMEM60Q9H2L4 133 aa23.36■■□□□ 1.33
CHRNE-202ENST00000572438 FEM1BQ9UK73 627 aa23.36■■□□□ 1.33
CHRNE-202ENST00000572438 ATAD5Q96QE3 1844 aa23.35■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms