RNA–Protein interactions for RNA: ENST00000572428.5

TVP23A-205, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 1 (best)

Gene TVP23A, Length 3,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-205ENST00000572428 TBC1D12O60347 775 aa10.08□□□□□ -0.8
TVP23A-205ENST00000572428 CYP2E1P05181 493 aaPredicted RBP10.08□□□□□ -0.8
TVP23A-205ENST00000572428 RASGRF1Q13972 1273 aa10.08□□□□□ -0.8
TVP23A-205ENST00000572428 CAVIN4Q5BKX8 364 aa10.08□□□□□ -0.8
TVP23A-205ENST00000572428 SPATA5Q8NB90 893 aa10.08□□□□□ -0.8
TVP23A-205ENST00000572428 TBC1D31Q96DN5 1066 aa10.08□□□□□ -0.8
TVP23A-205ENST00000572428 INTS4Q96HW7 963 aaKnown RBP10.08□□□□□ -0.8
TVP23A-205ENST00000572428 CLIC5Q9NZA1 410 aa10.08□□□□□ -0.8
TVP23A-205ENST00000572428 POLLQ9UGP5 575 aa10.08□□□□□ -0.8
TVP23A-205ENST00000572428 MYH2Q9UKX2 1941 aa10.07□□□□□ -0.8
TVP23A-205ENST00000572428 ZBTB7AO95365 584 aa10.07□□□□□ -0.8
TVP23A-205ENST00000572428 BCAMP50895 628 aa10.07□□□□□ -0.8
TVP23A-205ENST00000572428 IQCB1Q15051 598 aa10.07□□□□□ -0.8
TVP23A-205ENST00000572428 PRPF40BQ6NWY9 871 aaKnown RBP10.07□□□□□ -0.8
TVP23A-205ENST00000572428 ANKK1Q8NFD2 765 aa10.07□□□□□ -0.8
TVP23A-205ENST00000572428 LSG1Q9H089 658 aaKnown RBP10.07□□□□□ -0.8
TVP23A-205ENST00000572428 PPCSQ9HAB8 311 aa10.07□□□□□ -0.8
TVP23A-205ENST00000572428 CASS4Q9NQ75 786 aa10.07□□□□□ -0.8
TVP23A-205ENST00000572428 GGA1Q9UJY5 639 aa10.07□□□□□ -0.8
TVP23A-205ENST00000572428 IKBKGQ9Y6K9 419 aa10.07□□□□□ -0.8
TVP23A-205ENST00000572428 SBF1O95248 1867 aa10.07□□□□□ -0.8
TVP23A-205ENST00000572428 MYO1CO00159 1063 aa10.07□□□□□ -0.8
TVP23A-205ENST00000572428 FOXD2O60548 495 aaPredicted RBP10.07□□□□□ -0.8
TVP23A-205ENST00000572428 KLRK1P26718 216 aa10.07□□□□□ -0.8
TVP23A-205ENST00000572428 ZAP70P43403 619 aa10.07□□□□□ -0.8
TVP23A-205ENST00000572428 CUL4AQ13619 759 aa10.07□□□□□ -0.8
TVP23A-205ENST00000572428 OLFML1Q6UWY5 402 aa10.07□□□□□ -0.8
TVP23A-205ENST00000572428 SLC51AQ86UW1 340 aa10.07□□□□□ -0.8
TVP23A-205ENST00000572428 SLC7A5P1Q8MH63 180 aa10.07□□□□□ -0.8
TVP23A-205ENST00000572428 CCDC102AQ96A19 550 aa10.07□□□□□ -0.8
TVP23A-205ENST00000572428 MIEF2Q96C03 454 aa10.07□□□□□ -0.8
TVP23A-205ENST00000572428 VPS33BQ9H267 617 aa10.07□□□□□ -0.8
TVP23A-205ENST00000572428 CLIP2Q9UDT6 1046 aa10.07□□□□□ -0.8
TVP23A-205ENST00000572428 DENND2AQ9ULE3 1009 aa10.07□□□□□ -0.8
TVP23A-205ENST00000572428 LAMB1P07942 1786 aa10.07□□□□□ -0.8
TVP23A-205ENST00000572428 A0A0B4J203 849 aa10.06□□□□□ -0.8
TVP23A-205ENST00000572428 S100BP04271 92 aaPredicted RBP10.06□□□□□ -0.8
TVP23A-205ENST00000572428 CHRNA5P30532 468 aa10.06□□□□□ -0.8
TVP23A-205ENST00000572428 ADD2P35612 726 aa10.06□□□□□ -0.8
TVP23A-205ENST00000572428 IQCEQ6IPM2 695 aa10.06□□□□□ -0.8
TVP23A-205ENST00000572428 ZNF449Q6P9G9 518 aa10.06□□□□□ -0.8
TVP23A-205ENST00000572428 FIP1L1Q6UN15 594 aaKnown RBP10.06□□□□□ -0.8
TVP23A-205ENST00000572428 SNX32Q86XE0 403 aa10.06□□□□□ -0.8
TVP23A-205ENST00000572428 NPAS4Q8IUM7 802 aa10.06□□□□□ -0.8
TVP23A-205ENST00000572428 OSBPL5Q9H0X9 879 aaPredicted RBP10.06□□□□□ -0.8
TVP23A-205ENST00000572428 ABCG4Q9H172 646 aa10.06□□□□□ -0.8
TVP23A-205ENST00000572428 HELLSQ9NRZ9 838 aa10.06□□□□□ -0.8
TVP23A-205ENST00000572428 ZFYP08048 801 aaPredicted RBP10.06□□□□□ -0.8
TVP23A-205ENST00000572428 EIF4BP23588 611 aaKnown RBP10.06□□□□□ -0.8
TVP23A-205ENST00000572428 HIBADHP31937 336 aaKnown RBP10.06□□□□□ -0.8
TVP23A-205ENST00000572428 MPP3Q13368 585 aa10.06□□□□□ -0.8
TVP23A-205ENST00000572428 LRRC41Q15345 812 aa10.06□□□□□ -0.8
TVP23A-205ENST00000572428 DDX60LQ5H9U9 1706 aaKnown RBP10.06□□□□□ -0.8
TVP23A-205ENST00000572428 TXNRD3Q86VQ6 643 aa10.06□□□□□ -0.8
TVP23A-205ENST00000572428 IPCEF1Q8WWN9 437 aaPredicted RBP10.06□□□□□ -0.8
TVP23A-205ENST00000572428 PCDH12Q9NPG4 1184 aa10.06□□□□□ -0.8
TVP23A-205ENST00000572428 PRKAG2Q9UGJ0 569 aa10.06□□□□□ -0.8
TVP23A-205ENST00000572428 RRP15Q9Y3B9 282 aaKnown RBP10.06□□□□□ -0.8
TVP23A-205ENST00000572428 SPO11Q9Y5K1 396 aa10.06□□□□□ -0.8
TVP23A-205ENST00000572428 C7P10643 843 aa10.06□□□□□ -0.8
TVP23A-205ENST00000572428 DNAJA1P31689 397 aaKnown RBP10.06□□□□□ -0.8
TVP23A-205ENST00000572428 GYG1P46976 350 aa10.06□□□□□ -0.8
TVP23A-205ENST00000572428 ZMYM1Q5SVZ6 1142 aa10.06□□□□□ -0.8
TVP23A-205ENST00000572428 PACS2Q86VP3 889 aa10.06□□□□□ -0.8
TVP23A-205ENST00000572428 TMX3Q96JJ7 454 aa10.06□□□□□ -0.8
TVP23A-205ENST00000572428 IL25Q9H293 177 aa10.06□□□□□ -0.8
TVP23A-205ENST00000572428 PALD1Q9ULE6 856 aa10.06□□□□□ -0.8
TVP23A-205ENST00000572428 TCRBV5S4A2TA0A5A2 114 aa10.05□□□□□ -0.8
TVP23A-205ENST00000572428 hCG_1984214I3L0E3 225 aa10.05□□□□□ -0.8
TVP23A-205ENST00000572428 DPEP1P16444 411 aa10.05□□□□□ -0.8
TVP23A-205ENST00000572428 TMEM62Q0P6H9 643 aa10.05□□□□□ -0.8
TVP23A-205ENST00000572428 GRIK3Q13003 919 aa10.05□□□□□ -0.8
TVP23A-205ENST00000572428 LRRFIP1Q32MZ4 808 aaKnown RBP10.05□□□□□ -0.8
TVP23A-205ENST00000572428 TTLL6Q8N841 843 aa10.05□□□□□ -0.8
TVP23A-205ENST00000572428 EDC3Q96F86 508 aaKnown RBP10.05□□□□□ -0.8
TVP23A-205ENST00000572428 UROC1Q96N76 676 aa10.05□□□□□ -0.8
TVP23A-205ENST00000572428 LZTS1Q9Y250 596 aa10.05□□□□□ -0.8
TVP23A-205ENST00000572428 DTNBO60941 627 aa10.05□□□□□ -0.8
TVP23A-205ENST00000572428 HOXD11P31277 338 aaPredicted RBP10.05□□□□□ -0.8
TVP23A-205ENST00000572428 UBE3CQ15386 1083 aa10.05□□□□□ -0.8
TVP23A-205ENST00000572428 SLFNL1Q499Z3 407 aa10.05□□□□□ -0.8
TVP23A-205ENST00000572428 CWC27Q6UX04 472 aaKnown RBP10.05□□□□□ -0.8
TVP23A-205ENST00000572428 ZNF804AQ7Z570 1209 aa10.05□□□□□ -0.8
TVP23A-205ENST00000572428 CCDC65Q8IXS2 484 aa10.05□□□□□ -0.8
TVP23A-205ENST00000572428 C1orf74Q96LT6 269 aa10.05□□□□□ -0.8
TVP23A-205ENST00000572428 FSD1Q9BTV5 496 aa10.05□□□□□ -0.8
TVP23A-205ENST00000572428 PIH1D3Q9NQM4 214 aaKnown RBP10.05□□□□□ -0.8
TVP23A-205ENST00000572428 NSFL1CQ9UNZ2 370 aaKnown RBP10.05□□□□□ -0.8
TVP23A-205ENST00000572428 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.05□□□□□ -0.8
TVP23A-205ENST00000572428 FAM205AQ6ZU69 1335 aa10.05□□□□□ -0.8
TVP23A-205ENST00000572428 RNF113AO15541 343 aaKnown RBP10.04□□□□□ -0.8
TVP23A-205ENST00000572428 UFL1O94874 794 aa10.04□□□□□ -0.8
TVP23A-205ENST00000572428 CLCN2P51788 898 aa10.04□□□□□ -0.8
TVP23A-205ENST00000572428 CCNHP51946 323 aaPredicted RBP10.04□□□□□ -0.8
TVP23A-205ENST00000572428 EIF2B5Q13144 721 aaKnown RBP10.04□□□□□ -0.8
TVP23A-205ENST00000572428 PAK2Q13177 524 aa10.04□□□□□ -0.8
TVP23A-205ENST00000572428 SCLT1Q96NL6 688 aa10.04□□□□□ -0.8
TVP23A-205ENST00000572428 TM6SF1Q9BZW5 370 aa10.04□□□□□ -0.8
TVP23A-205ENST00000572428 NDUFB9Q9Y6M9 179 aa10.04□□□□□ -0.8
TVP23A-205ENST00000572428 TIAM2Q8IVF5 1701 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms