RNA–Protein interactions for RNA: ENST00000572205.5

SMG6-210, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-210ENST00000572205 TNKSO95271 1327 aa10.25□□□□□ -0.77
SMG6-210ENST00000572205 E7EWF7 191 aa10.24□□□□□ -0.77
SMG6-210ENST00000572205 TOP1P11387 765 aaKnown RBP10.24□□□□□ -0.77
SMG6-210ENST00000572205 CYBAP13498 195 aa10.24□□□□□ -0.77
SMG6-210ENST00000572205 PRKAR2AP13861 404 aaKnown RBP10.24□□□□□ -0.77
SMG6-210ENST00000572205 CYP2B6P20813 491 aa10.24□□□□□ -0.77
SMG6-210ENST00000572205 MCCP23508 829 aa10.24□□□□□ -0.77
SMG6-210ENST00000572205 GJA8P48165 433 aa10.24□□□□□ -0.77
SMG6-210ENST00000572205 NT5C2P49902 561 aa10.24□□□□□ -0.77
SMG6-210ENST00000572205 CACNB2Q08289 660 aaPredicted RBP10.24□□□□□ -0.77
SMG6-210ENST00000572205 ZNF543Q08ER8 600 aa10.24□□□□□ -0.77
SMG6-210ENST00000572205 IMMTQ16891 758 aaKnown RBP10.24□□□□□ -0.77
SMG6-210ENST00000572205 ABRAQ8N0Z2 381 aa10.24□□□□□ -0.77
SMG6-210ENST00000572205 PRPF38AQ8NAV1 312 aaKnown RBP10.24□□□□□ -0.77
SMG6-210ENST00000572205 IL27Q8NEV9 243 aa10.24□□□□□ -0.77
SMG6-210ENST00000572205 DCAF4Q8WV16 495 aa10.24□□□□□ -0.77
SMG6-210ENST00000572205 CCDC136Q96JN2 1154 aa10.24□□□□□ -0.77
SMG6-210ENST00000572205 NUDT12Q9BQG2 462 aa10.24□□□□□ -0.77
SMG6-210ENST00000572205 TEX13BQ9BXU2 312 aa10.24□□□□□ -0.77
SMG6-210ENST00000572205 RANBP17Q9H2T7 1088 aaKnown RBP10.24□□□□□ -0.77
SMG6-210ENST00000572205 RNF41Q9H4P4 317 aaPredicted RBP10.24□□□□□ -0.77
SMG6-210ENST00000572205 FEM1BQ9UK73 627 aa10.24□□□□□ -0.77
SMG6-210ENST00000572205 PRR12Q9ULL5 1215 aa10.24□□□□□ -0.77
SMG6-210ENST00000572205 TMEM232C9JQI7 657 aa10.23□□□□□ -0.77
SMG6-210ENST00000572205 MYCP01106 439 aaPredicted RBP10.23□□□□□ -0.77
SMG6-210ENST00000572205 GJB1P08034 283 aa10.23□□□□□ -0.77
SMG6-210ENST00000572205 CCND3P30281 292 aaPredicted RBP10.23□□□□□ -0.77
SMG6-210ENST00000572205 RGS2P41220 211 aa10.23□□□□□ -0.77
SMG6-210ENST00000572205 STAT2P52630 851 aa10.23□□□□□ -0.77
SMG6-210ENST00000572205 OAZ1P54368 228 aa10.23□□□□□ -0.77
SMG6-210ENST00000572205 CCNA1P78396 465 aa10.23□□□□□ -0.77
SMG6-210ENST00000572205 ZNF792Q3KQV3 632 aa10.23□□□□□ -0.77
SMG6-210ENST00000572205 LHX8Q68G74 356 aa10.23□□□□□ -0.77
SMG6-210ENST00000572205 SNRNP48Q6IEG0 339 aaKnown RBP10.23□□□□□ -0.77
SMG6-210ENST00000572205 DGKHQ86XP1 1220 aa10.23□□□□□ -0.77
SMG6-210ENST00000572205 ESR2Q92731 530 aa10.23□□□□□ -0.77
SMG6-210ENST00000572205 TTC14Q96N46 770 aa10.23□□□□□ -0.77
SMG6-210ENST00000572205 ZSCAN10Q96SZ4 725 aaPredicted RBP10.23□□□□□ -0.77
SMG6-210ENST00000572205 KATNBL1Q9H079 304 aa10.23□□□□□ -0.77
SMG6-210ENST00000572205 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.23□□□□□ -0.77
SMG6-210ENST00000572205 CPVLQ9H3G5 476 aa10.23□□□□□ -0.77
SMG6-210ENST00000572205 KDM4CQ9H3R0 1056 aa10.23□□□□□ -0.77
SMG6-210ENST00000572205 MROH8Q9H579 483 aa10.23□□□□□ -0.77
SMG6-210ENST00000572205 GPHNQ9NQX3 736 aaPredicted RBP10.23□□□□□ -0.77
SMG6-210ENST00000572205 SLC27A2O14975 620 aa10.22□□□□□ -0.77
SMG6-210ENST00000572205 SLC25A27O95847 323 aa10.22□□□□□ -0.77
SMG6-210ENST00000572205 SLC16A2P36021 539 aa10.22□□□□□ -0.77
SMG6-210ENST00000572205 STAT3P40763 770 aa10.22□□□□□ -0.77
SMG6-210ENST00000572205 SLC1A4P43007 532 aa10.22□□□□□ -0.77
SMG6-210ENST00000572205 SNAP25P60880 206 aa10.22□□□□□ -0.77
SMG6-210ENST00000572205 ERICH6BQ5W0A0 696 aa10.22□□□□□ -0.77
SMG6-210ENST00000572205 OLFML2BQ68BL8 750 aa10.22□□□□□ -0.77
SMG6-210ENST00000572205 PNMA1Q8ND90 353 aa10.22□□□□□ -0.77
SMG6-210ENST00000572205 U2AF1L4Q8WU68 220 aaKnown RBP10.22□□□□□ -0.77
SMG6-210ENST00000572205 RUFY2Q8WXA3 655 aa10.22□□□□□ -0.77
SMG6-210ENST00000572205 KCNB2Q92953 911 aa10.22□□□□□ -0.77
SMG6-210ENST00000572205 KIFC2Q96AC6 838 aa10.22□□□□□ -0.77
SMG6-210ENST00000572205 CHMP4CQ96CF2 233 aa10.22□□□□□ -0.77
SMG6-210ENST00000572205 MAML3Q96JK9 1138 aa10.22□□□□□ -0.77
SMG6-210ENST00000572205 AGBL1Q96MI9 1066 aa10.22□□□□□ -0.77
SMG6-210ENST00000572205 RAVER2Q9HCJ3 691 aaKnown RBP10.22□□□□□ -0.77
SMG6-210ENST00000572205 CTNNA3Q9UI47 895 aa10.22□□□□□ -0.77
SMG6-210ENST00000572205 FRMPD2Q68DX3 1309 aaPredicted RBP10.22□□□□□ -0.77
SMG6-210ENST00000572205 OPLAHO14841 1288 aa10.21□□□□□ -0.77
SMG6-210ENST00000572205 ADCY6O43306 1168 aa10.21□□□□□ -0.77
SMG6-210ENST00000572205 STRNO43815 780 aa10.21□□□□□ -0.77
SMG6-210ENST00000572205 RAD21O60216 631 aa10.21□□□□□ -0.77
SMG6-210ENST00000572205 CDC45O75419 566 aa10.21□□□□□ -0.77
SMG6-210ENST00000572205 PGK2P07205 417 aa10.21□□□□□ -0.77
SMG6-210ENST00000572205 ZKSCAN1P17029 563 aaPredicted RBP10.21□□□□□ -0.77
SMG6-210ENST00000572205 CYP2C19P33261 490 aa10.21□□□□□ -0.77
SMG6-210ENST00000572205 TROAPQ12815 778 aa10.21□□□□□ -0.77
SMG6-210ENST00000572205 MUM1L1Q5H9M0 696 aa10.21□□□□□ -0.77
SMG6-210ENST00000572205 PPP4R3BQ5MIZ7 849 aa10.21□□□□□ -0.77
SMG6-210ENST00000572205 CREB3L3Q68CJ9 461 aa10.21□□□□□ -0.77
SMG6-210ENST00000572205 NBPF11Q86T75 865 aa10.21□□□□□ -0.77
SMG6-210ENST00000572205 FAM160B2Q86V87 743 aa10.21□□□□□ -0.77
SMG6-210ENST00000572205 NCAPG2Q86XI2 1143 aa10.21□□□□□ -0.77
SMG6-210ENST00000572205 IGDCC4Q8TDY8 1250 aa10.21□□□□□ -0.77
SMG6-210ENST00000572205 DIS3LQ8TF46 1054 aaKnown RBP10.21□□□□□ -0.77
SMG6-210ENST00000572205 MTMR8Q96EF0 704 aa10.21□□□□□ -0.77
SMG6-210ENST00000572205 CNNM2Q9H8M5 875 aa10.21□□□□□ -0.77
SMG6-210ENST00000572205 LY9Q9HBG7 655 aa10.21□□□□□ -0.77
SMG6-210ENST00000572205 A1CFQ9NQ94 594 aaKnown RBP10.21□□□□□ -0.77
SMG6-210ENST00000572205 TOMM22Q9NS69 142 aa10.21□□□□□ -0.77
SMG6-210ENST00000572205 PPP4R2Q9NY27 417 aa10.21□□□□□ -0.77
SMG6-210ENST00000572205 RPTORQ8N122 1335 aa10.21□□□□□ -0.78
SMG6-210ENST00000572205 DOCK5Q9H7D0 1870 aa10.21□□□□□ -0.78
SMG6-210ENST00000572205 PFASO15067 1338 aa10.2□□□□□ -0.78
SMG6-210ENST00000572205 PPP1R11O60927 126 aaPredicted RBP10.2□□□□□ -0.78
SMG6-210ENST00000572205 SGPL1O95470 568 aa10.2□□□□□ -0.78
SMG6-210ENST00000572205 GOLGA8HP0CJ92 632 aa10.2□□□□□ -0.78
SMG6-210ENST00000572205 COL6A1P12109 1028 aa10.2□□□□□ -0.78
SMG6-210ENST00000572205 PLS1Q14651 629 aa10.2□□□□□ -0.78
SMG6-210ENST00000572205 ADCK5Q3MIX3 580 aa10.2□□□□□ -0.78
SMG6-210ENST00000572205 SYDE2Q5VT97 1194 aa10.2□□□□□ -0.78
SMG6-210ENST00000572205 STAG2Q8N3U4 1231 aa10.2□□□□□ -0.78
SMG6-210ENST00000572205 FAM133AQ8N9E0 248 aa10.2□□□□□ -0.78
SMG6-210ENST00000572205 WDR19Q8NEZ3 1342 aa10.2□□□□□ -0.78
SMG6-210ENST00000572205 CLEC4DQ8WXI8 215 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms