RNA–Protein interactions for RNA: ENST00000571186.5

CIITA-205, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5

Gene CIITA, Length 1,041 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-205ENST00000571186 SLC38A10Q9HBR0 1119 aa17.07■□□□□ 0.32
CIITA-205ENST00000571186 PRDM6Q9NQX0 595 aa17.07■□□□□ 0.32
CIITA-205ENST00000571186 FEM1BQ9UK73 627 aa17.07■□□□□ 0.32
CIITA-205ENST00000571186 NCOR1O75376 2440 aa17.07■□□□□ 0.32
CIITA-205ENST00000571186 GRXCR1A8MXD5 290 aa17.06■□□□□ 0.32
CIITA-205ENST00000571186 ARVCFO00192 962 aa17.06■□□□□ 0.32
CIITA-205ENST00000571186 ADCY6O43306 1168 aa17.06■□□□□ 0.32
CIITA-205ENST00000571186 PRDM1O75626 825 aa17.06■□□□□ 0.32
CIITA-205ENST00000571186 APPP05067 770 aa17.06■□□□□ 0.32
CIITA-205ENST00000571186 CST5P28325 142 aaPredicted RBP17.06■□□□□ 0.32
CIITA-205ENST00000571186 GJA9P57773 515 aa17.06■□□□□ 0.32
CIITA-205ENST00000571186 TMEM240Q5SV17 173 aa17.06■□□□□ 0.32
CIITA-205ENST00000571186 C16orf59Q7L2K0 433 aa17.06■□□□□ 0.32
CIITA-205ENST00000571186 ARMCX2Q7L311 632 aa17.06■□□□□ 0.32
CIITA-205ENST00000571186 TMEM199Q8N511 208 aa17.06■□□□□ 0.32
CIITA-205ENST00000571186 USP38Q8NB14 1042 aa17.06■□□□□ 0.32
CIITA-205ENST00000571186 CHST13Q8NET6 341 aa17.06■□□□□ 0.32
CIITA-205ENST00000571186 OSBP2Q969R2 916 aa17.06■□□□□ 0.32
CIITA-205ENST00000571186 ECHDC1Q9NTX5 307 aa17.06■□□□□ 0.32
CIITA-205ENST00000571186 FBXO40Q9UH90 709 aa17.06■□□□□ 0.32
CIITA-205ENST00000571186 ISY1Q9ULR0 285 aaKnown RBP17.06■□□□□ 0.32
CIITA-205ENST00000571186 GBF1Q92538 1859 aa17.05■□□□□ 0.32
CIITA-205ENST00000571186 CHD9Q3L8U1 2897 aa17.05■□□□□ 0.32
CIITA-205ENST00000571186 A0A0U1RQG5 324 aaPredicted RBP17.05■□□□□ 0.32
CIITA-205ENST00000571186 TLR3O15455 904 aaKnown RBP17.05■□□□□ 0.32
CIITA-205ENST00000571186 ACRP10323 421 aa17.05■□□□□ 0.32
CIITA-205ENST00000571186 CSF2RAP15509 400 aa17.05■□□□□ 0.32
CIITA-205ENST00000571186 PBX2P40425 430 aa17.05■□□□□ 0.32
CIITA-205ENST00000571186 TDO2P48775 406 aa17.05■□□□□ 0.32
CIITA-205ENST00000571186 TSHZ3Q63HK5 1081 aa17.05■□□□□ 0.32
CIITA-205ENST00000571186 NOL8Q76FK4 1167 aaKnown RBP17.05■□□□□ 0.32
CIITA-205ENST00000571186 CCDC144CPQ8IYA2 1237 aa17.05■□□□□ 0.32
CIITA-205ENST00000571186 PPM1EQ8WY54 764 aa17.05■□□□□ 0.32
CIITA-205ENST00000571186 APPBP2Q92624 585 aa17.05■□□□□ 0.32
CIITA-205ENST00000571186 MKL1Q969V6 931 aa17.05■□□□□ 0.32
CIITA-205ENST00000571186 CEP95Q96GE4 821 aa17.05■□□□□ 0.32
CIITA-205ENST00000571186 GAS2L1Q99501 681 aaPredicted RBP17.05■□□□□ 0.32
CIITA-205ENST00000571186 PPP1R12CQ9BZL4 782 aa17.05■□□□□ 0.32
CIITA-205ENST00000571186 UPF3AQ9H1J1 476 aaKnown RBP17.05■□□□□ 0.32
CIITA-205ENST00000571186 ZNF287Q9HBT7 754 aa17.05■□□□□ 0.32
CIITA-205ENST00000571186 HOMER2Q9NSB8 354 aa17.05■□□□□ 0.32
CIITA-205ENST00000571186 MTMR4Q9NYA4 1195 aa17.05■□□□□ 0.32
CIITA-205ENST00000571186 IGKV6D-41A0A0C4DH26 115 aa17.04■□□□□ 0.32
CIITA-205ENST00000571186 CNTN2Q02246 1040 aa17.04■□□□□ 0.32
CIITA-205ENST00000571186 TJAP1Q5JTD0 557 aa17.04■□□□□ 0.32
CIITA-205ENST00000571186 ZNF365Q70YC5 407 aa17.04■□□□□ 0.32
CIITA-205ENST00000571186 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.04■□□□□ 0.32
CIITA-205ENST00000571186 LRRC47Q8N1G4 583 aaKnown RBP17.04■□□□□ 0.32
CIITA-205ENST00000571186 KBTBD3Q8NAB2 608 aa17.04■□□□□ 0.32
CIITA-205ENST00000571186 FGD4Q96M96 766 aa17.04■□□□□ 0.32
CIITA-205ENST00000571186 RNF113AO15541 343 aaKnown RBP17.03■□□□□ 0.32
CIITA-205ENST00000571186 GPAA1O43292 621 aa17.03■□□□□ 0.32
CIITA-205ENST00000571186 TTLL1O95922 423 aa17.03■□□□□ 0.32
CIITA-205ENST00000571186 BMP3P12645 472 aa17.03■□□□□ 0.32
CIITA-205ENST00000571186 OAZ1P54368 228 aa17.03■□□□□ 0.32
CIITA-205ENST00000571186 BEX3Q00994 111 aa17.03■□□□□ 0.32
CIITA-205ENST00000571186 TNFAIP2Q03169 654 aa17.03■□□□□ 0.32
CIITA-205ENST00000571186 SLFN13Q68D06 897 aa17.03■□□□□ 0.32
CIITA-205ENST00000571186 FAM126BQ8IXS8 530 aa17.03■□□□□ 0.32
CIITA-205ENST00000571186 OTUD7AQ8TE49 926 aaPredicted RBP17.03■□□□□ 0.32
CIITA-205ENST00000571186 CHMP4CQ96CF2 233 aa17.03■□□□□ 0.32
CIITA-205ENST00000571186 PBX4Q9BYU1 374 aa17.03■□□□□ 0.32
CIITA-205ENST00000571186 PRDM12Q9H4Q4 367 aa17.03■□□□□ 0.32
CIITA-205ENST00000571186 EPB41L4AQ9HCS5 686 aaPredicted RBP17.03■□□□□ 0.32
CIITA-205ENST00000571186 TMEM232C9JQI7 657 aa17.02■□□□□ 0.32
CIITA-205ENST00000571186 IGHDP01880 384 aa17.02■□□□□ 0.32
CIITA-205ENST00000571186 GNAT2P19087 354 aa17.02■□□□□ 0.32
CIITA-205ENST00000571186 CYP2C18P33260 490 aa17.02■□□□□ 0.32
CIITA-205ENST00000571186 IKQ13123 557 aaPredicted RBP17.02■□□□□ 0.32
CIITA-205ENST00000571186 HDAC1Q13547 482 aaPredicted RBP17.02■□□□□ 0.32
CIITA-205ENST00000571186 GMCL1P1Q8NEA9 526 aa17.02■□□□□ 0.32
CIITA-205ENST00000571186 GPATCH3Q96I76 525 aa17.02■□□□□ 0.32
CIITA-205ENST00000571186 MSRAQ9UJ68 235 aa17.02■□□□□ 0.32
CIITA-205ENST00000571186 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.01■□□□□ 0.31
CIITA-205ENST00000571186 PATL2C9JE40 543 aaKnown RBP17.01■□□□□ 0.31
CIITA-205ENST00000571186 CTAGE5O15320 804 aa17.01■□□□□ 0.31
CIITA-205ENST00000571186 ZFYP08048 801 aaPredicted RBP17.01■□□□□ 0.31
CIITA-205ENST00000571186 TSPY3P0CV98 308 aa17.01■□□□□ 0.31
CIITA-205ENST00000571186 TSPY8P0CW00 308 aa17.01■□□□□ 0.31
CIITA-205ENST00000571186 FDX1P10109 184 aa17.01■□□□□ 0.31
CIITA-205ENST00000571186 ANKRD45Q5TZF3 282 aa17.01■□□□□ 0.31
CIITA-205ENST00000571186 RASIP1Q5U651 963 aa17.01■□□□□ 0.31
CIITA-205ENST00000571186 PSRC1Q6PGN9 363 aaPredicted RBP17.01■□□□□ 0.31
CIITA-205ENST00000571186 CXCL17Q6UXB2 119 aa17.01■□□□□ 0.31
CIITA-205ENST00000571186 CHURC1Q8WUH1 139 aa17.01■□□□□ 0.31
CIITA-205ENST00000571186 KATNBL1Q9H079 304 aa17.01■□□□□ 0.31
CIITA-205ENST00000571186 ACAD9Q9H845 621 aa17.01■□□□□ 0.31
CIITA-205ENST00000571186 IL23AQ9NPF7 189 aa17.01■□□□□ 0.31
CIITA-205ENST00000571186 MUC3AQ02505 3323 aa17.01■□□□□ 0.31
CIITA-205ENST00000571186 CHD7Q9P2D1 2997 aa17.01■□□□□ 0.31
CIITA-205ENST00000571186 M0R2C6 588 aa17■□□□□ 0.31
CIITA-205ENST00000571186 CD4P01730 458 aa17■□□□□ 0.31
CIITA-205ENST00000571186 FGBP02675 491 aa17■□□□□ 0.31
CIITA-205ENST00000571186 IGFBP4P22692 258 aa17■□□□□ 0.31
CIITA-205ENST00000571186 STAT2P52630 851 aa17■□□□□ 0.31
CIITA-205ENST00000571186 TFAP4Q01664 338 aa17■□□□□ 0.31
CIITA-205ENST00000571186 PDE4BQ07343 736 aa17■□□□□ 0.31
CIITA-205ENST00000571186 IFNL3Q8IZI9 196 aa17■□□□□ 0.31
CIITA-205ENST00000571186 FAM133AQ8N9E0 248 aa17■□□□□ 0.31
CIITA-205ENST00000571186 NEDD1Q8NHV4 660 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms