RNA–Protein interactions for RNA: ENST00000570902.1

SCARF1-204, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 1,060 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-204ENST00000570902 TLR3O15455 904 aaKnown RBP22.66■■□□□ 1.22
SCARF1-204ENST00000570902 TJAP1Q5JTD0 557 aa22.66■■□□□ 1.22
SCARF1-204ENST00000570902 GNASQ5JWF2 1037 aa22.66■■□□□ 1.22
SCARF1-204ENST00000570902 KBTBD3Q8NAB2 608 aa22.66■■□□□ 1.22
SCARF1-204ENST00000570902 APPBP2Q92624 585 aa22.66■■□□□ 1.22
SCARF1-204ENST00000570902 FDX1P10109 184 aa22.65■■□□□ 1.22
SCARF1-204ENST00000570902 GNAT2P19087 354 aa22.65■■□□□ 1.22
SCARF1-204ENST00000570902 TMEM240Q5SV17 173 aa22.65■■□□□ 1.22
SCARF1-204ENST00000570902 PSRC1Q6PGN9 363 aaPredicted RBP22.65■■□□□ 1.22
SCARF1-204ENST00000570902 CCDC129Q6ZRS4 1044 aa22.65■■□□□ 1.22
SCARF1-204ENST00000570902 ARMCX2Q7L311 632 aa22.65■■□□□ 1.22
SCARF1-204ENST00000570902 GMCL1P1Q8NEA9 526 aa22.65■■□□□ 1.22
SCARF1-204ENST00000570902 ADCY6O43306 1168 aa22.64■■□□□ 1.21
SCARF1-204ENST00000570902 TTLL1O95922 423 aa22.64■■□□□ 1.21
SCARF1-204ENST00000570902 ZFYP08048 801 aaPredicted RBP22.64■■□□□ 1.21
SCARF1-204ENST00000570902 TDO2P48775 406 aa22.64■■□□□ 1.21
SCARF1-204ENST00000570902 FAM126BQ8IXS8 530 aa22.64■■□□□ 1.21
SCARF1-204ENST00000570902 OSBP2Q969R2 916 aa22.64■■□□□ 1.21
SCARF1-204ENST00000570902 CEP95Q96GE4 821 aa22.64■■□□□ 1.21
SCARF1-204ENST00000570902 GPATCH3Q96I76 525 aa22.64■■□□□ 1.21
SCARF1-204ENST00000570902 FGD4Q96M96 766 aa22.64■■□□□ 1.21
SCARF1-204ENST00000570902 GAS2L1Q99501 681 aaPredicted RBP22.64■■□□□ 1.21
SCARF1-204ENST00000570902 MTMR4Q9NYA4 1195 aa22.64■■□□□ 1.21
SCARF1-204ENST00000570902 MYH4Q9Y623 1939 aa22.63■■□□□ 1.21
SCARF1-204ENST00000570902 RNF113AO15541 343 aaKnown RBP22.63■■□□□ 1.21
SCARF1-204ENST00000570902 SMARCA5O60264 1052 aaPredicted RBP22.63■■□□□ 1.21
SCARF1-204ENST00000570902 CSF2RAP15509 400 aa22.63■■□□□ 1.21
SCARF1-204ENST00000570902 NKX3-2P78367 333 aa22.63■■□□□ 1.21
SCARF1-204ENST00000570902 RASIP1Q5U651 963 aa22.63■■□□□ 1.21
SCARF1-204ENST00000570902 C16orf59Q7L2K0 433 aa22.63■■□□□ 1.21
SCARF1-204ENST00000570902 CCDC144CPQ8IYA2 1237 aa22.63■■□□□ 1.21
SCARF1-204ENST00000570902 USP38Q8NB14 1042 aa22.63■■□□□ 1.21
SCARF1-204ENST00000570902 PBX4Q9BYU1 374 aa22.63■■□□□ 1.21
SCARF1-204ENST00000570902 GPAA1O43292 621 aa22.62■■□□□ 1.21
SCARF1-204ENST00000570902 APPP05067 770 aa22.62■■□□□ 1.21
SCARF1-204ENST00000570902 BMP3P12645 472 aa22.62■■□□□ 1.21
SCARF1-204ENST00000570902 IRX5P78411 483 aaPredicted RBP22.62■■□□□ 1.21
SCARF1-204ENST00000570902 MTIF3Q9H2K0 278 aaKnown RBP22.62■■□□□ 1.21
SCARF1-204ENST00000570902 ACAD9Q9H845 621 aa22.62■■□□□ 1.21
SCARF1-204ENST00000570902 PRDM1O75626 825 aa22.61■■□□□ 1.21
SCARF1-204ENST00000570902 CABYRO75952 493 aa22.61■■□□□ 1.21
SCARF1-204ENST00000570902 LRRFIP1Q32MZ4 808 aaKnown RBP22.61■■□□□ 1.21
SCARF1-204ENST00000570902 SLFN13Q68D06 897 aa22.61■■□□□ 1.21
SCARF1-204ENST00000570902 ZNF365Q70YC5 407 aa22.61■■□□□ 1.21
SCARF1-204ENST00000570902 LRRC47Q8N1G4 583 aaKnown RBP22.61■■□□□ 1.21
SCARF1-204ENST00000570902 PPP1R12CQ9BZL4 782 aa22.61■■□□□ 1.21
SCARF1-204ENST00000570902 KATNBL1Q9H079 304 aa22.61■■□□□ 1.21
SCARF1-204ENST00000570902 EPB41L4AQ9HCS5 686 aaPredicted RBP22.61■■□□□ 1.21
SCARF1-204ENST00000570902 HOMER2Q9NSB8 354 aa22.61■■□□□ 1.21
SCARF1-204ENST00000570902 PLIN4Q96Q06 1357 aa22.61■■□□□ 1.21
SCARF1-204ENST00000570902 TSPY3P0CV98 308 aa22.6■■□□□ 1.21
SCARF1-204ENST00000570902 TSPY8P0CW00 308 aa22.6■■□□□ 1.21
SCARF1-204ENST00000570902 PBX2P40425 430 aa22.6■■□□□ 1.21
SCARF1-204ENST00000570902 STAT2P52630 851 aa22.6■■□□□ 1.21
SCARF1-204ENST00000570902 TNFAIP2Q03169 654 aa22.6■■□□□ 1.21
SCARF1-204ENST00000570902 PDE4BQ07343 736 aa22.6■■□□□ 1.21
SCARF1-204ENST00000570902 RAB30Q15771 203 aa22.6■■□□□ 1.21
SCARF1-204ENST00000570902 AKNAD1Q5T1N1 836 aa22.6■■□□□ 1.21
SCARF1-204ENST00000570902 NOL8Q76FK4 1167 aaKnown RBP22.6■■□□□ 1.21
SCARF1-204ENST00000570902 SEZ6LQ9BYH1 1024 aa22.6■■□□□ 1.21
SCARF1-204ENST00000570902 NACAP1Q9BZK3 213 aa22.6■■□□□ 1.21
SCARF1-204ENST00000570902 IL23AQ9NPF7 189 aa22.6■■□□□ 1.21
SCARF1-204ENST00000570902 ASB14A6NK59 587 aa22.59■■□□□ 1.21
SCARF1-204ENST00000570902 GRXCR1A8MXD5 290 aa22.59■■□□□ 1.21
SCARF1-204ENST00000570902 PATL2C9JE40 543 aaKnown RBP22.59■■□□□ 1.21
SCARF1-204ENST00000570902 TMEM232C9JQI7 657 aa22.59■■□□□ 1.21
SCARF1-204ENST00000570902 TNFRSF10AO00220 468 aa22.59■■□□□ 1.21
SCARF1-204ENST00000570902 CTAGE5O15320 804 aa22.59■■□□□ 1.21
SCARF1-204ENST00000570902 CD4P01730 458 aa22.59■■□□□ 1.21
SCARF1-204ENST00000570902 SLC3A2P08195 630 aaKnown RBP22.59■■□□□ 1.21
SCARF1-204ENST00000570902 ACRP10323 421 aa22.59■■□□□ 1.21
SCARF1-204ENST00000570902 FAM160B2Q86V87 743 aa22.59■■□□□ 1.21
SCARF1-204ENST00000570902 FAM133AQ8N9E0 248 aa22.59■■□□□ 1.21
SCARF1-204ENST00000570902 NEDD1Q8NHV4 660 aa22.59■■□□□ 1.21
SCARF1-204ENST00000570902 CHURC1Q8WUH1 139 aa22.59■■□□□ 1.21
SCARF1-204ENST00000570902 HERVK_113Q902F9 699 aa22.59■■□□□ 1.21
SCARF1-204ENST00000570902 MSRAQ9UJ68 235 aa22.59■■□□□ 1.21
SCARF1-204ENST00000570902 ISY1Q9ULR0 285 aaKnown RBP22.59■■□□□ 1.21
SCARF1-204ENST00000570902 MCM3APO60318 1980 aa22.58■■□□□ 1.21
SCARF1-204ENST00000570902 CNTN2Q02246 1040 aa22.58■■□□□ 1.21
SCARF1-204ENST00000570902 TKFCQ3LXA3 575 aa22.58■■□□□ 1.21
SCARF1-204ENST00000570902 PPP4R3BQ5MIZ7 849 aa22.58■■□□□ 1.21
SCARF1-204ENST00000570902 IFNL3Q8IZI9 196 aa22.58■■□□□ 1.21
SCARF1-204ENST00000570902 ATXN2LQ8WWM7 1075 aaKnown RBP22.58■■□□□ 1.21
SCARF1-204ENST00000570902 PRDM12Q9H4Q4 367 aa22.58■■□□□ 1.21
SCARF1-204ENST00000570902 A1CFQ9NQ94 594 aaKnown RBP22.58■■□□□ 1.21
SCARF1-204ENST00000570902 RNF146Q9NTX7 359 aa22.58■■□□□ 1.21
SCARF1-204ENST00000570902 M0R2C6 588 aa22.57■■□□□ 1.2
SCARF1-204ENST00000570902 ZEB2O60315 1214 aa22.57■■□□□ 1.2
SCARF1-204ENST00000570902 CYP2C18P33260 490 aa22.57■■□□□ 1.2
SCARF1-204ENST00000570902 BEX3Q00994 111 aa22.57■■□□□ 1.2
SCARF1-204ENST00000570902 IKQ13123 557 aaPredicted RBP22.57■■□□□ 1.2
SCARF1-204ENST00000570902 TLK2Q86UE8 772 aa22.57■■□□□ 1.2
SCARF1-204ENST00000570902 SLC43A3Q8NBI5 491 aa22.57■■□□□ 1.2
SCARF1-204ENST00000570902 STAG1Q8WVM7 1258 aa22.57■■□□□ 1.2
SCARF1-204ENST00000570902 GMCL1Q96IK5 515 aa22.57■■□□□ 1.2
SCARF1-204ENST00000570902 AP5M1Q9H0R1 490 aa22.57■■□□□ 1.2
SCARF1-204ENST00000570902 HIPK3Q9H422 1215 aa22.57■■□□□ 1.2
SCARF1-204ENST00000570902 GNEQ9Y223 722 aaKnown RBP22.57■■□□□ 1.2
SCARF1-204ENST00000570902 TTC28Q96AY4 2481 aa22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms