RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, human

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMG6-208	ENST00000570874	ZNF449	Q6P9G9	518 aa		4.07	□□□□□ -1.76
SMG6-208	ENST00000570874	HS2ST1	Q7LGA3	356 aa		4.07	□□□□□ -1.76
SMG6-208	ENST00000570874	TCEAL8	Q8IYN2	117 aa		4.07	□□□□□ -1.76
SMG6-208	ENST00000570874	ARL10	Q8N8L6	244 aa		4.07	□□□□□ -1.76
SMG6-208	ENST00000570874	FLCN	Q8NFG4	579 aa		4.07	□□□□□ -1.76
SMG6-208	ENST00000570874	LINS1	Q8NG48	757 aa		4.07	□□□□□ -1.76
SMG6-208	ENST00000570874	PLBD2	Q8NHP8	589 aa		4.07	□□□□□ -1.76
SMG6-208	ENST00000570874	PI4K2B	Q8TCG2	481 aa		4.07	□□□□□ -1.76
SMG6-208	ENST00000570874	AFAP1L1	Q8TED9	768 aa		4.07	□□□□□ -1.76
SMG6-208	ENST00000570874	SMCR8	Q8TEV9	937 aa	Predicted RBP	4.07	□□□□□ -1.76
SMG6-208	ENST00000570874	GTF3C2	Q8WUA4	911 aa	Predicted RBP	4.07	□□□□□ -1.76
SMG6-208	ENST00000570874	GIMAP1	Q8WWP7	306 aa		4.07	□□□□□ -1.76
SMG6-208	ENST00000570874	NELL1	Q92832	810 aa		4.07	□□□□□ -1.76
SMG6-208	ENST00000570874	GPRASP2	Q96D09	838 aa		4.07	□□□□□ -1.76
SMG6-208	ENST00000570874	CRELD1	Q96HD1	420 aa		4.07	□□□□□ -1.76
SMG6-208	ENST00000570874	SIL1	Q9H173	461 aa		4.07	□□□□□ -1.76
SMG6-208	ENST00000570874	ZNF408	Q9H9D4	720 aa		4.07	□□□□□ -1.76
SMG6-208	ENST00000570874	KANSL2	Q9H9L4	492 aa		4.07	□□□□□ -1.76
SMG6-208	ENST00000570874	SRA1	Q9HD15	236 aa	Known RBP	4.07	□□□□□ -1.76
SMG6-208	ENST00000570874	NEUROD4	Q9HD90	331 aa		4.07	□□□□□ -1.76
SMG6-208	ENST00000570874	HMX1	Q9NP08	348 aa	Predicted RBP	4.07	□□□□□ -1.76
SMG6-208	ENST00000570874	DIAPH3	Q9NSV4	1193 aa		4.07	□□□□□ -1.76
SMG6-208	ENST00000570874	HOXC10	Q9NYD6	342 aa		4.07	□□□□□ -1.76
SMG6-208	ENST00000570874	TLR7	Q9NYK1	1049 aa	Known RBP	4.07	□□□□□ -1.76
SMG6-208	ENST00000570874	CXXC1	Q9P0U4	656 aa	Predicted RBP	4.07	□□□□□ -1.76
SMG6-208	ENST00000570874	CGN	Q9P2M7	1197 aa	Known RBP	4.07	□□□□□ -1.76
SMG6-208	ENST00000570874	EPS15L1	Q9UBC2	864 aa		4.07	□□□□□ -1.76
SMG6-208	ENST00000570874	USP21	Q9UK80	565 aa		4.07	□□□□□ -1.76
SMG6-208	ENST00000570874	TPCN1	Q9ULQ1	816 aa		4.07	□□□□□ -1.76
SMG6-208	ENST00000570874	CEP131	Q9UPN4	1083 aa		4.07	□□□□□ -1.76
SMG6-208	ENST00000570874	NOD1	Q9Y239	953 aa		4.07	□□□□□ -1.76
SMG6-208	ENST00000570874	TTLL3	Q9Y4R7	772 aa		4.07	□□□□□ -1.76
SMG6-208	ENST00000570874	SNX5	Q9Y5X3	404 aa		4.07	□□□□□ -1.76
SMG6-208	ENST00000570874	PALLD	Q8WX93	1383 aa		4.06	□□□□□ -1.76
SMG6-208	ENST00000570874	ERBB4	Q15303	1308 aa		4.06	□□□□□ -1.76
SMG6-208	ENST00000570874	SPATA31A6	Q5VVP1	1343 aa		4.06	□□□□□ -1.76
SMG6-208	ENST00000570874		A0A087WZG4	1122 aa		4.06	□□□□□ -1.76
SMG6-208	ENST00000570874	E2F8	A0AVK6	867 aa		4.06	□□□□□ -1.76
SMG6-208	ENST00000570874	KLRG2	A4D1S0	409 aa	Predicted RBP	4.06	□□□□□ -1.76
SMG6-208	ENST00000570874	FAM221B	A6H8Z2	402 aa		4.06	□□□□□ -1.76
SMG6-208	ENST00000570874		A6NCN8	305 aa		4.06	□□□□□ -1.76
SMG6-208	ENST00000570874		H7C1W4	665 aa		4.06	□□□□□ -1.76
SMG6-208	ENST00000570874		K7ENM7	598 aa		4.06	□□□□□ -1.76
SMG6-208	ENST00000570874	NDUFB5	O43674	189 aa		4.06	□□□□□ -1.76
SMG6-208	ENST00000570874	KIAA0754	O94854	1291 aa		4.06	□□□□□ -1.76
SMG6-208	ENST00000570874	SASH1	O94885	1247 aa		4.06	□□□□□ -1.76
SMG6-208	ENST00000570874	ARIH2	O95376	493 aa		4.06	□□□□□ -1.76
SMG6-208	ENST00000570874	MSL3P1	P0C860	447 aa		4.06	□□□□□ -1.76
SMG6-208	ENST00000570874	RAC2	P15153	192 aa		4.06	□□□□□ -1.76
SMG6-208	ENST00000570874	ATF7	P17544	494 aa	Predicted RBP	4.06	□□□□□ -1.76
SMG6-208	ENST00000570874	SDS	P20132	328 aa		4.06	□□□□□ -1.76
SMG6-208	ENST00000570874	GPT	P24298	496 aa		4.06	□□□□□ -1.76
SMG6-208	ENST00000570874	CAP2	P40123	477 aa		4.06	□□□□□ -1.76
SMG6-208	ENST00000570874	BCAM	P50895	628 aa		4.06	□□□□□ -1.76
SMG6-208	ENST00000570874	RAB27A	P51159	221 aa		4.06	□□□□□ -1.76
SMG6-208	ENST00000570874	COPA	P53621	1224 aa		4.06	□□□□□ -1.76
SMG6-208	ENST00000570874	PDE1A	P54750	535 aa		4.06	□□□□□ -1.76
SMG6-208	ENST00000570874	KRT83	P78385	493 aa		4.06	□□□□□ -1.76
SMG6-208	ENST00000570874	FOXO4	P98177	505 aa		4.06	□□□□□ -1.76
SMG6-208	ENST00000570874	PTPN12	Q05209	780 aa	Known RBP	4.06	□□□□□ -1.76
SMG6-208	ENST00000570874	PAK2	Q13177	524 aa		4.06	□□□□□ -1.76
SMG6-208	ENST00000570874	STK3	Q13188	491 aa		4.06	□□□□□ -1.76
SMG6-208	ENST00000570874	TBX2	Q13207	712 aa	Predicted RBP	4.06	□□□□□ -1.76
SMG6-208	ENST00000570874	MTX1	Q13505	466 aa		4.06	□□□□□ -1.76
SMG6-208	ENST00000570874	LAMC2	Q13753	1193 aa		4.06	□□□□□ -1.76
SMG6-208	ENST00000570874	ZC3H12B	Q5HYM0	836 aa	Known RBP	4.06	□□□□□ -1.76
SMG6-208	ENST00000570874	SLC10A5	Q5PT55	438 aa		4.06	□□□□□ -1.76
SMG6-208	ENST00000570874	MEX3C	Q5U5Q3	659 aa	Known RBP	4.06	□□□□□ -1.76
SMG6-208	ENST00000570874	NXN	Q6DKJ4	435 aa		4.06	□□□□□ -1.76
SMG6-208	ENST00000570874	IL31	Q6EBC2	164 aa		4.06	□□□□□ -1.76
SMG6-208	ENST00000570874	SWSAP1	Q6NVH7	229 aa		4.06	□□□□□ -1.76
SMG6-208	ENST00000570874	INTS5	Q6P9B9	1019 aa	Known RBP	4.06	□□□□□ -1.76
SMG6-208	ENST00000570874	CTR9	Q6PD62	1173 aa		4.06	□□□□□ -1.76
SMG6-208	ENST00000570874	ANKS3	Q6ZW76	656 aa		4.06	□□□□□ -1.76
SMG6-208	ENST00000570874	RSRC2	Q7L4I2	434 aa	Known RBP	4.06	□□□□□ -1.76
SMG6-208	ENST00000570874	AMIGO3	Q86WK7	504 aa		4.06	□□□□□ -1.76
SMG6-208	ENST00000570874	DDX42	Q86XP3	938 aa	Known RBP eCLIP	4.06	□□□□□ -1.76
SMG6-208	ENST00000570874	TRIM22	Q8IYM9	498 aa		4.06	□□□□□ -1.76
SMG6-208	ENST00000570874	LINC00116	Q8NCU8	138 aa		4.06	□□□□□ -1.76
SMG6-208	ENST00000570874	RHPN1	Q8TCX5	695 aa		4.06	□□□□□ -1.76
SMG6-208	ENST00000570874	CHAC2	Q8WUX2	184 aa		4.06	□□□□□ -1.76
SMG6-208	ENST00000570874	ATP6V1E2	Q96A05	226 aa		4.06	□□□□□ -1.76
SMG6-208	ENST00000570874	TBC1D32	Q96NH3	1257 aa		4.06	□□□□□ -1.76
SMG6-208	ENST00000570874	ISCA1	Q9BUE6	129 aa		4.06	□□□□□ -1.76
SMG6-208	ENST00000570874	LRRCC1	Q9C099	1032 aa		4.06	□□□□□ -1.76
SMG6-208	ENST00000570874	IL25	Q9H293	177 aa		4.06	□□□□□ -1.76
SMG6-208	ENST00000570874	CPSF2	Q9P2I0	782 aa	Known RBP	4.06	□□□□□ -1.76
SMG6-208	ENST00000570874	PLAA	Q9Y263	795 aa		4.06	□□□□□ -1.76
SMG6-208	ENST00000570874	IPP	Q9Y573	584 aa		4.06	□□□□□ -1.76
SMG6-208	ENST00000570874	CEP83	Q9Y592	693 aa		4.06	□□□□□ -1.76
SMG6-208	ENST00000570874	ZNF646	O15015	1829 aa	Predicted RBP	4.06	□□□□□ -1.76
SMG6-208	ENST00000570874	LAMB1	P07942	1786 aa		4.06	□□□□□ -1.76
SMG6-208	ENST00000570874	QSER1	Q2KHR3	1735 aa		4.06	□□□□□ -1.76
SMG6-208	ENST00000570874	KIAA1551	Q9HCM1	1747 aa		4.06	□□□□□ -1.76
SMG6-208	ENST00000570874	MYH1	P12882	1939 aa		4.05	□□□□□ -1.76
SMG6-208	ENST00000570874	FOCAD	Q5VW36	1801 aa		4.05	□□□□□ -1.76
SMG6-208	ENST00000570874	RGPD3	A6NKT7	1758 aa	Predicted RBP	4.05	□□□□□ -1.76
SMG6-208	ENST00000570874	RGPD4	Q7Z3J3	1758 aa		4.05	□□□□□ -1.76
SMG6-208	ENST00000570874	ADAMTSL1	Q8N6G6	1762 aa		4.05	□□□□□ -1.76
SMG6-208	ENST00000570874	MAP3K15	Q6ZN16	1313 aa		4.05	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms