RNA–Protein interactions for RNA: ENST00000570827.6

USP43-203, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 2

Gene USP43, Length 3,624 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-203ENST00000570827 TBX2Q13207 712 aaPredicted RBP11.09□□□□□ -0.63
USP43-203ENST00000570827 UBE3CQ15386 1083 aa11.09□□□□□ -0.63
USP43-203ENST00000570827 DDB1Q16531 1140 aa11.09□□□□□ -0.63
USP43-203ENST00000570827 EARS2Q5JPH6 523 aaKnown RBP11.09□□□□□ -0.63
USP43-203ENST00000570827 COG1Q8WTW3 980 aa11.09□□□□□ -0.63
USP43-203ENST00000570827 UBLCP1Q8WVY7 318 aaPredicted RBP11.09□□□□□ -0.63
USP43-203ENST00000570827 RRP36Q96EU6 259 aaKnown RBP11.09□□□□□ -0.63
USP43-203ENST00000570827 LRRC1Q9BTT6 524 aa11.09□□□□□ -0.63
USP43-203ENST00000570827 GOLGA8HP0CJ92 632 aa11.08□□□□□ -0.64
USP43-203ENST00000570827 TXKP42681 527 aa11.08□□□□□ -0.64
USP43-203ENST00000570827 CEP85LQ5SZL2 805 aa11.08□□□□□ -0.64
USP43-203ENST00000570827 MICALCLQ6ZW33 695 aa11.08□□□□□ -0.64
USP43-203ENST00000570827 LPIN2Q92539 896 aa11.08□□□□□ -0.64
USP43-203ENST00000570827 MYCBPQ99417 103 aaPredicted RBP11.08□□□□□ -0.64
USP43-203ENST00000570827 EPB41L5Q9HCM4 733 aa11.08□□□□□ -0.64
USP43-203ENST00000570827 KCND1Q9NSA2 647 aa11.08□□□□□ -0.64
USP43-203ENST00000570827 XRN1Q8IZH2 1706 aaKnown RBP11.08□□□□□ -0.64
USP43-203ENST00000570827 GTPBP6O43824 516 aaPredicted RBP11.08□□□□□ -0.64
USP43-203ENST00000570827 CIAO1O76071 339 aa11.08□□□□□ -0.64
USP43-203ENST00000570827 FTCDO95954 541 aa11.08□□□□□ -0.64
USP43-203ENST00000570827 RAPGEF1Q13905 1077 aa11.08□□□□□ -0.64
USP43-203ENST00000570827 E2F5Q15329 346 aa11.08□□□□□ -0.64
USP43-203ENST00000570827 CCDC121Q6ZUS5 278 aa11.08□□□□□ -0.64
USP43-203ENST00000570827 MCM9Q9NXL9 1143 aa11.08□□□□□ -0.64
USP43-203ENST00000570827 NFU1Q9UMS0 254 aa11.08□□□□□ -0.64
USP43-203ENST00000570827 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.08□□□□□ -0.64
USP43-203ENST00000570827 TUBGCP6Q96RT7 1819 aa11.08□□□□□ -0.64
USP43-203ENST00000570827 FAM208AQ9UK61 1670 aaKnown RBP11.08□□□□□ -0.64
USP43-203ENST00000570827 KRT14P02533 472 aa11.08□□□□□ -0.64
USP43-203ENST00000570827 LIFRP42702 1097 aa11.08□□□□□ -0.64
USP43-203ENST00000570827 CTSWP56202 376 aa11.08□□□□□ -0.64
USP43-203ENST00000570827 CAVIN4Q5BKX8 364 aa11.08□□□□□ -0.64
USP43-203ENST00000570827 TMC4Q7Z404 712 aa11.08□□□□□ -0.64
USP43-203ENST00000570827 MB21D1Q8N884 522 aa11.08□□□□□ -0.64
USP43-203ENST00000570827 LACRTQ9GZZ8 138 aa11.08□□□□□ -0.64
USP43-203ENST00000570827 KANSL2Q9H9L4 492 aa11.08□□□□□ -0.64
USP43-203ENST00000570827 FAM53CQ9NYF3 392 aa11.08□□□□□ -0.64
USP43-203ENST00000570827 HPCAL4Q9UM19 191 aa11.08□□□□□ -0.64
USP43-203ENST00000570827 FMN2Q9NZ56 1722 aa11.07□□□□□ -0.64
USP43-203ENST00000570827 MAP2K7O14733 419 aa11.07□□□□□ -0.64
USP43-203ENST00000570827 ADAT2Q7Z6V5 191 aaKnown RBP11.07□□□□□ -0.64
USP43-203ENST00000570827 CNOT6LQ96LI5 555 aaKnown RBP11.07□□□□□ -0.64
USP43-203ENST00000570827 ZSCAN10Q96SZ4 725 aaPredicted RBP11.07□□□□□ -0.64
USP43-203ENST00000570827 EPB41L4AQ9HCS5 686 aaPredicted RBP11.07□□□□□ -0.64
USP43-203ENST00000570827 LUC7LQ9NQ29 371 aaKnown RBP11.07□□□□□ -0.64
USP43-203ENST00000570827 H7C1D1 291 aa11.07□□□□□ -0.64
USP43-203ENST00000570827 NF2P35240 595 aa11.07□□□□□ -0.64
USP43-203ENST00000570827 NAPAP54920 295 aa11.07□□□□□ -0.64
USP43-203ENST00000570827 DPYDQ12882 1025 aa11.07□□□□□ -0.64
USP43-203ENST00000570827 NNTQ13423 1086 aa11.07□□□□□ -0.64
USP43-203ENST00000570827 LRRC41Q15345 812 aa11.07□□□□□ -0.64
USP43-203ENST00000570827 NTRK3Q16288 839 aa11.07□□□□□ -0.64
USP43-203ENST00000570827 CPLX4Q7Z7G2 160 aa11.07□□□□□ -0.64
USP43-203ENST00000570827 NLRP10Q86W26 655 aa11.07□□□□□ -0.64
USP43-203ENST00000570827 ZBTB38Q8NAP3 1195 aaPredicted RBP11.07□□□□□ -0.64
USP43-203ENST00000570827 CALML4Q96GE6 196 aa11.07□□□□□ -0.64
USP43-203ENST00000570827 KRT12Q99456 494 aa11.07□□□□□ -0.64
USP43-203ENST00000570827 PACSIN2Q9UNF0 486 aaPredicted RBP11.07□□□□□ -0.64
USP43-203ENST00000570827 NWD1Q149M9 1564 aa11.07□□□□□ -0.64
USP43-203ENST00000570827 LRRC37A3O60309 1634 aa11.07□□□□□ -0.64
USP43-203ENST00000570827 CPDO75976 1380 aa11.07□□□□□ -0.64
USP43-203ENST00000570827 RTL9Q8NET4 1388 aa11.07□□□□□ -0.64
USP43-203ENST00000570827 CCNT1O60563 726 aaKnown RBP11.07□□□□□ -0.64
USP43-203ENST00000570827 PLEKP08567 350 aaPredicted RBP11.07□□□□□ -0.64
USP43-203ENST00000570827 TECP42680 631 aa11.07□□□□□ -0.64
USP43-203ENST00000570827 DNM2P50570 870 aa11.07□□□□□ -0.64
USP43-203ENST00000570827 IRAK1P51617 712 aa11.07□□□□□ -0.64
USP43-203ENST00000570827 GUCY1A3Q02108 690 aa11.07□□□□□ -0.64
USP43-203ENST00000570827 EVX2Q03828 476 aa11.07□□□□□ -0.64
USP43-203ENST00000570827 ACTN3Q08043 901 aaPredicted RBP11.07□□□□□ -0.64
USP43-203ENST00000570827 EHHADHQ08426 723 aa11.07□□□□□ -0.64
USP43-203ENST00000570827 MMS22LQ6ZRQ5 1243 aa11.07□□□□□ -0.64
USP43-203ENST00000570827 FAM114A1Q8IWE2 563 aa11.07□□□□□ -0.64
USP43-203ENST00000570827 NELFCDQ8IXH7 590 aa11.07□□□□□ -0.64
USP43-203ENST00000570827 UHMK1Q8TAS1 419 aaKnown RBP11.07□□□□□ -0.64
USP43-203ENST00000570827 HDAC7Q8WUI4 952 aa11.07□□□□□ -0.64
USP43-203ENST00000570827 MS4A14Q96JA4 679 aa11.07□□□□□ -0.64
USP43-203ENST00000570827 FAM217BQ9NTX9 383 aaPredicted RBP11.07□□□□□ -0.64
USP43-203ENST00000570827 GSG1L2A8MUP6 293 aa11.06□□□□□ -0.64
USP43-203ENST00000570827 PPP1R3GB7ZBB8 358 aa11.06□□□□□ -0.64
USP43-203ENST00000570827 TRAF5O00463 557 aa11.06□□□□□ -0.64
USP43-203ENST00000570827 EIF4A3P38919 411 aaKnown RBP11.06□□□□□ -0.64
USP43-203ENST00000570827 PICALMQ13492 652 aa11.06□□□□□ -0.64
USP43-203ENST00000570827 SUSD4Q5VX71 490 aa11.06□□□□□ -0.64
USP43-203ENST00000570827 SLC51AQ86UW1 340 aa11.06□□□□□ -0.64
USP43-203ENST00000570827 DZIP1Q86YF9 867 aaKnown RBP11.06□□□□□ -0.64
USP43-203ENST00000570827 KSR1Q8IVT5 923 aa11.06□□□□□ -0.64
USP43-203ENST00000570827 ZNF444Q8N0Y2 327 aaPredicted RBP11.06□□□□□ -0.64
USP43-203ENST00000570827 PSD3Q9NYI0 1048 aa11.06□□□□□ -0.64
USP43-203ENST00000570827 DMGDHQ9UI17 866 aaKnown RBP11.06□□□□□ -0.64
USP43-203ENST00000570827 MYBL2P10244 700 aa11.06□□□□□ -0.64
USP43-203ENST00000570827 KIF5BP33176 963 aa11.06□□□□□ -0.64
USP43-203ENST00000570827 CORO7P57737 925 aa11.06□□□□□ -0.64
USP43-203ENST00000570827 SELENOSQ9BQE4 189 aa11.06□□□□□ -0.64
USP43-203ENST00000570827 ATG3Q9NT62 314 aa11.06□□□□□ -0.64
USP43-203ENST00000570827 RWDD2AQ9UIY3 292 aa11.06□□□□□ -0.64
USP43-203ENST00000570827 MYO1FO00160 1098 aa11.05□□□□□ -0.64
USP43-203ENST00000570827 CEP104O60308 925 aa11.05□□□□□ -0.64
USP43-203ENST00000570827 HEXIM1O94992 359 aaKnown RBP11.05□□□□□ -0.64
USP43-203ENST00000570827 RPSAP08865 295 aaKnown RBP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms