RNA–Protein interactions for RNA: ENST00000569518.5

VCPKMT-205, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 2

Gene VCPKMT, Length 1,827 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-205ENST00000569518 TRPM4Q8TD43 1214 aa25.72■■□□□ 1.71
VCPKMT-205ENST00000569518 CSRNP2Q9H175 543 aa25.72■■□□□ 1.71
VCPKMT-205ENST00000569518 FRMD4AQ9P2Q2 1039 aaPredicted RBP25.72■■□□□ 1.71
VCPKMT-205ENST00000569518 KCNH3Q9ULD8 1083 aa25.72■■□□□ 1.71
VCPKMT-205ENST00000569518 ASNSP08243 561 aa25.72■■□□□ 1.71
VCPKMT-205ENST00000569518 MCM7P33993 719 aa25.72■■□□□ 1.71
VCPKMT-205ENST00000569518 ADCY7P51828 1080 aa25.72■■□□□ 1.71
VCPKMT-205ENST00000569518 SDF4Q9BRK5 362 aa25.72■■□□□ 1.71
VCPKMT-205ENST00000569518 CDC37Q16543 378 aaPredicted RBP25.71■■□□□ 1.71
VCPKMT-205ENST00000569518 SPECC1Q5M775 1068 aa25.71■■□□□ 1.71
VCPKMT-205ENST00000569518 GOPCQ9HD26 462 aa25.71■■□□□ 1.71
VCPKMT-205ENST00000569518 RIC8AQ9NPQ8 531 aa25.71■■□□□ 1.71
VCPKMT-205ENST00000569518 YBX3P16989 372 aaKnown RBP eCLIP25.7■■□□□ 1.71
VCPKMT-205ENST00000569518 NONOQ15233 471 aaKnown RBP eCLIP25.7■■□□□ 1.71
VCPKMT-205ENST00000569518 SASS6Q6UVJ0 657 aa25.7■■□□□ 1.71
VCPKMT-205ENST00000569518 TMEM232C9JQI7 657 aa25.7■■□□□ 1.7
VCPKMT-205ENST00000569518 SYDE2Q5VT97 1194 aa25.7■■□□□ 1.7
VCPKMT-205ENST00000569518 APOBEC3FQ8IUX4 373 aaKnown RBP25.7■■□□□ 1.7
VCPKMT-205ENST00000569518 SPICE1Q8N0Z3 855 aa25.7■■□□□ 1.7
VCPKMT-205ENST00000569518 FAM13BQ9NYF5 915 aa25.7■■□□□ 1.7
VCPKMT-205ENST00000569518 UTRNP46939 3433 aa25.69■■□□□ 1.7
VCPKMT-205ENST00000569518 ANGEL2Q5VTE6 544 aaKnown RBP25.69■■□□□ 1.7
VCPKMT-205ENST00000569518 ARL6IP4Q66PJ3 421 aaKnown RBP25.69■■□□□ 1.7
VCPKMT-205ENST00000569518 VCPKMTQ9H867 229 aa25.69■■□□□ 1.7
VCPKMT-205ENST00000569518 UVSSAQ2YD98 709 aa25.68■■□□□ 1.7
VCPKMT-205ENST00000569518 USP49Q70CQ1 688 aa25.68■■□□□ 1.7
VCPKMT-205ENST00000569518 SH2D4AQ9H788 454 aa25.68■■□□□ 1.7
VCPKMT-205ENST00000569518 GINM1Q9NU53 330 aa25.68■■□□□ 1.7
VCPKMT-205ENST00000569518 TMEM260Q9NX78 707 aa25.68■■□□□ 1.7
VCPKMT-205ENST00000569518 BIN2Q9UBW5 565 aaPredicted RBP25.68■■□□□ 1.7
VCPKMT-205ENST00000569518 EPS15P42566 896 aa25.67■■□□□ 1.7
VCPKMT-205ENST00000569518 CLK2P49760 499 aaKnown RBP25.67■■□□□ 1.7
VCPKMT-205ENST00000569518 IL17AQ16552 155 aa25.67■■□□□ 1.7
VCPKMT-205ENST00000569518 NBPF12Q5TAG4 269 aaPredicted RBP25.67■■□□□ 1.7
VCPKMT-205ENST00000569518 GLIS2Q9BZE0 524 aaPredicted RBP25.67■■□□□ 1.7
VCPKMT-205ENST00000569518 HIRAP54198 1017 aaPredicted RBP25.67■■□□□ 1.7
VCPKMT-205ENST00000569518 ANO6Q4KMQ2 910 aa25.67■■□□□ 1.7
VCPKMT-205ENST00000569518 JAKMIP3Q5VZ66 844 aa25.67■■□□□ 1.7
VCPKMT-205ENST00000569518 KRBA2Q6ZNG9 492 aa25.67■■□□□ 1.7
VCPKMT-205ENST00000569518 ELOA2Q8IYF1 753 aaPredicted RBP25.67■■□□□ 1.7
VCPKMT-205ENST00000569518 KIAA1468Q9P260 1216 aa25.67■■□□□ 1.7
VCPKMT-205ENST00000569518 DOCK1Q14185 1865 aa25.66■■□□□ 1.7
VCPKMT-205ENST00000569518 CTNND1O60716 968 aaKnown RBP25.66■■□□□ 1.7
VCPKMT-205ENST00000569518 LONRF3Q496Y0 759 aa25.66■■□□□ 1.7
VCPKMT-205ENST00000569518 NEK8Q86SG6 692 aa25.66■■□□□ 1.7
VCPKMT-205ENST00000569518 FAM200AQ8TCP9 573 aa25.66■■□□□ 1.7
VCPKMT-205ENST00000569518 CUL5Q93034 780 aa25.66■■□□□ 1.7
VCPKMT-205ENST00000569518 PCDHA1Q9Y5I3 950 aa25.66■■□□□ 1.7
VCPKMT-205ENST00000569518 VWA3AA6NCI4 1184 aa25.65■■□□□ 1.7
VCPKMT-205ENST00000569518 STX1AQ16623 288 aa25.65■■□□□ 1.7
VCPKMT-205ENST00000569518 FAM83BQ5T0W9 1011 aa25.65■■□□□ 1.7
VCPKMT-205ENST00000569518 CCDC84Q86UT8 332 aaPredicted RBP25.65■■□□□ 1.7
VCPKMT-205ENST00000569518 TBCKQ8TEA7 893 aa25.65■■□□□ 1.7
VCPKMT-205ENST00000569518 ERCC4Q92889 916 aaPredicted RBP25.65■■□□□ 1.7
VCPKMT-205ENST00000569518 RNF181Q9P0P0 153 aa25.65■■□□□ 1.7
VCPKMT-205ENST00000569518 PRR12Q9ULL5 1215 aa25.65■■□□□ 1.7
VCPKMT-205ENST00000569518 STAT2P52630 851 aa25.65■■□□□ 1.7
VCPKMT-205ENST00000569518 MRPL12P52815 198 aaKnown RBP25.65■■□□□ 1.7
VCPKMT-205ENST00000569518 SYMPKQ92797 1274 aaKnown RBP25.65■■□□□ 1.7
VCPKMT-205ENST00000569518 EPSTI1Q96J88 318 aa25.65■■□□□ 1.7
VCPKMT-205ENST00000569518 AMNQ9BXJ7 453 aa25.65■■□□□ 1.7
VCPKMT-205ENST00000569518 TMEM60Q9H2L4 133 aa25.65■■□□□ 1.7
VCPKMT-205ENST00000569518 GGA3Q9NZ52 723 aa25.65■■□□□ 1.7
VCPKMT-205ENST00000569518 LAD1O00515 517 aa25.64■■□□□ 1.7
VCPKMT-205ENST00000569518 PLA2G6O60733 806 aa25.64■■□□□ 1.7
VCPKMT-205ENST00000569518 CAVIN2O95810 425 aa25.64■■□□□ 1.7
VCPKMT-205ENST00000569518 IKQ13123 557 aaPredicted RBP25.64■■□□□ 1.7
VCPKMT-205ENST00000569518 ORC2Q13416 577 aaPredicted RBP25.64■■□□□ 1.7
VCPKMT-205ENST00000569518 GLT8D2Q9H1C3 349 aa25.64■■□□□ 1.7
VCPKMT-205ENST00000569518 PSTPIP2Q9H939 334 aa25.64■■□□□ 1.7
VCPKMT-205ENST00000569518 POLR2DO15514 142 aaKnown RBP25.63■■□□□ 1.69
VCPKMT-205ENST00000569518 DDNO94850 711 aaPredicted RBP25.63■■□□□ 1.69
VCPKMT-205ENST00000569518 UBE2SQ16763 222 aa25.63■■□□□ 1.69
VCPKMT-205ENST00000569518 DCAF15Q66K64 600 aa25.63■■□□□ 1.69
VCPKMT-205ENST00000569518 PPP1R9BQ96SB3 815 aa25.63■■□□□ 1.69
VCPKMT-205ENST00000569518 ZNF112Q9UJU3 913 aa25.63■■□□□ 1.69
VCPKMT-205ENST00000569518 EDIL3O43854 480 aa25.63■■□□□ 1.69
VCPKMT-205ENST00000569518 PRPHP41219 470 aa25.63■■□□□ 1.69
VCPKMT-205ENST00000569518 SNAP25P60880 206 aa25.63■■□□□ 1.69
VCPKMT-205ENST00000569518 ANP32BQ92688 251 aaKnown RBP25.63■■□□□ 1.69
VCPKMT-205ENST00000569518 HOOK2Q96ED9 719 aa25.63■■□□□ 1.69
VCPKMT-205ENST00000569518 ZNF341Q9BYN7 854 aa25.63■■□□□ 1.69
VCPKMT-205ENST00000569518 DNAJC25Q9H1X3 360 aa25.63■■□□□ 1.69
VCPKMT-205ENST00000569518 PPP2R3BQ9Y5P8 575 aa25.63■■□□□ 1.69
VCPKMT-205ENST00000569518 A0A087X0B3 334 aa25.62■■□□□ 1.69
VCPKMT-205ENST00000569518 ACTN4O43707 911 aaKnown RBP25.62■■□□□ 1.69
VCPKMT-205ENST00000569518 LONP1P36776 959 aaKnown RBP25.62■■□□□ 1.69
VCPKMT-205ENST00000569518 MDM2Q00987 491 aaPredicted RBP25.62■■□□□ 1.69
VCPKMT-205ENST00000569518 CCDC173Q0VFZ6 552 aa25.62■■□□□ 1.69
VCPKMT-205ENST00000569518 LETM2Q2VYF4 491 aa25.62■■□□□ 1.69
VCPKMT-205ENST00000569518 FBXO11Q86XK2 927 aa25.62■■□□□ 1.69
VCPKMT-205ENST00000569518 CNNM3Q8NE01 707 aa25.62■■□□□ 1.69
VCPKMT-205ENST00000569518 TUBE1Q9UJT0 475 aa25.62■■□□□ 1.69
VCPKMT-205ENST00000569518 SSC5DA1L4H1 1573 aa25.61■■□□□ 1.69
VCPKMT-205ENST00000569518 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP25.61■■□□□ 1.69
VCPKMT-205ENST00000569518 INPP5BP32019 993 aa25.61■■□□□ 1.69
VCPKMT-205ENST00000569518 ZYXQ15942 572 aaKnown RBP25.61■■□□□ 1.69
VCPKMT-205ENST00000569518 PDLIM2Q96JY6 352 aa25.61■■□□□ 1.69
VCPKMT-205ENST00000569518 CBX8Q9HC52 389 aa25.61■■□□□ 1.69
VCPKMT-205ENST00000569518 MYH7BA7E2Y1 1941 aa25.61■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms