RNA–Protein interactions for RNA: ENST00000569243.5

UBR1-209, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-209	ENST00000569243	TTC9B	Q8N6N2	239 aa		6.21	□□□□□ -1.42
UBR1-209	ENST00000569243	USHBP1	Q8N6Y0	703 aa		6.21	□□□□□ -1.42
UBR1-209	ENST00000569243	GOLM1	Q8NBJ4	401 aa		6.21	□□□□□ -1.42
UBR1-209	ENST00000569243	ZNF526	Q8TF50	670 aa	Predicted RBP	6.21	□□□□□ -1.42
UBR1-209	ENST00000569243	SAMD11	Q96NU1	681 aa		6.21	□□□□□ -1.42
UBR1-209	ENST00000569243	FOXP3	Q9BZS1	431 aa		6.21	□□□□□ -1.42
UBR1-209	ENST00000569243	LNPK	Q9C0E8	428 aa		6.21	□□□□□ -1.42
UBR1-209	ENST00000569243	PRDM14	Q9GZV8	571 aa		6.21	□□□□□ -1.42
UBR1-209	ENST00000569243	CHURC1-FNTB	B4DL54	471 aa		6.2	□□□□□ -1.42
UBR1-209	ENST00000569243	GREM1	O60565	184 aa		6.2	□□□□□ -1.42
UBR1-209	ENST00000569243	MSL3P1	P0C860	447 aa		6.2	□□□□□ -1.42
UBR1-209	ENST00000569243	CCNF	P41002	786 aa		6.2	□□□□□ -1.42
UBR1-209	ENST00000569243	RNF4	P78317	190 aa		6.2	□□□□□ -1.42
UBR1-209	ENST00000569243	RAD51AP2	Q09MP3	1159 aa		6.2	□□□□□ -1.42
UBR1-209	ENST00000569243	CCDC27	Q2M243	656 aa		6.2	□□□□□ -1.42
UBR1-209	ENST00000569243	CWF19L2	Q2TBE0	894 aa	Known RBP	6.2	□□□□□ -1.42
UBR1-209	ENST00000569243	ZPBP2	Q6X784	338 aa		6.2	□□□□□ -1.42
UBR1-209	ENST00000569243	USP51	Q70EK9	711 aa		6.2	□□□□□ -1.42
UBR1-209	ENST00000569243	CSTF2T	Q9H0L4	616 aa	Known RBP eCLIP	6.2	□□□□□ -1.42
UBR1-209	ENST00000569243	BCL11A	Q9H165	835 aa		6.2	□□□□□ -1.42
UBR1-209	ENST00000569243	IRS2	Q9Y4H2	1338 aa		6.2	□□□□□ -1.42
UBR1-209	ENST00000569243	TMEM82	A0PJX8	343 aa		6.19	□□□□□ -1.42
UBR1-209	ENST00000569243	FZD7	O75084	574 aa		6.19	□□□□□ -1.42
UBR1-209	ENST00000569243	GJA9	P57773	515 aa		6.19	□□□□□ -1.42
UBR1-209	ENST00000569243	ZNF200	P98182	395 aa	Predicted RBP	6.19	□□□□□ -1.42
UBR1-209	ENST00000569243	RPTN	Q6XPR3	784 aa		6.19	□□□□□ -1.42
UBR1-209	ENST00000569243	CHST13	Q8NET6	341 aa		6.19	□□□□□ -1.42
UBR1-209	ENST00000569243	SYTL5	Q8TDW5	730 aa	Predicted RBP	6.19	□□□□□ -1.42
UBR1-209	ENST00000569243	ASCC2	Q9H1I8	757 aa	Predicted RBP	6.19	□□□□□ -1.42
UBR1-209	ENST00000569243	PCED1A	Q9H1Q7	454 aa		6.19	□□□□□ -1.42
UBR1-209	ENST00000569243	EHMT1	Q9H9B1	1298 aa		6.19	□□□□□ -1.42
UBR1-209	ENST00000569243	GMIP	Q9P107	970 aa		6.19	□□□□□ -1.42
UBR1-209	ENST00000569243	SUPT16H	Q9Y5B9	1047 aa	Known RBP	6.19	□□□□□ -1.42
UBR1-209	ENST00000569243	TAF6L	Q9Y6J9	622 aa		6.19	□□□□□ -1.42
UBR1-209	ENST00000569243	SSU72P8	A0A1W2PR75	194 aa		6.18	□□□□□ -1.42
UBR1-209	ENST00000569243	HSF5	Q4G112	596 aa	Predicted RBP	6.18	□□□□□ -1.42
UBR1-209	ENST00000569243	CDCP2	Q5VXM1	449 aa		6.18	□□□□□ -1.42
UBR1-209	ENST00000569243	GALNT18	Q6P9A2	607 aa		6.18	□□□□□ -1.42
UBR1-209	ENST00000569243	PHACTR4	Q8IZ21	702 aa		6.18	□□□□□ -1.42
UBR1-209	ENST00000569243	REXO1	Q8N1G1	1221 aa	Known RBP	6.18	□□□□□ -1.42
UBR1-209	ENST00000569243	DAGLB	Q8NCG7	672 aa		6.18	□□□□□ -1.42
UBR1-209	ENST00000569243	DVL3	Q92997	716 aa	Predicted RBP	6.18	□□□□□ -1.42
UBR1-209	ENST00000569243	KBTBD4	Q9NVX7	518 aa		6.18	□□□□□ -1.42
UBR1-209	ENST00000569243	KLHL3	Q9UH77	587 aa		6.18	□□□□□ -1.42
UBR1-209	ENST00000569243	PMF1-BGLAP	U3KQ54	211 aa		6.18	□□□□□ -1.42
UBR1-209	ENST00000569243	MINDY4B	A8MYZ0	360 aa		6.17	□□□□□ -1.42
UBR1-209	ENST00000569243	FKTN	O75072	461 aa		6.17	□□□□□ -1.42
UBR1-209	ENST00000569243	GBP1	P32455	592 aa		6.17	□□□□□ -1.42
UBR1-209	ENST00000569243	EIF4A3	P38919	411 aa	Known RBP	6.17	□□□□□ -1.42
UBR1-209	ENST00000569243	CHMP4BP1	P59074	171 aa		6.17	□□□□□ -1.42
UBR1-209	ENST00000569243	FOXO4	P98177	505 aa		6.17	□□□□□ -1.42
UBR1-209	ENST00000569243	LAPTM5	Q13571	262 aa		6.17	□□□□□ -1.42
UBR1-209	ENST00000569243	CBX2	Q14781	532 aa	Predicted RBP	6.17	□□□□□ -1.42
UBR1-209	ENST00000569243	PLEKHN1	Q494U1	663 aa	Predicted RBP	6.17	□□□□□ -1.42
UBR1-209	ENST00000569243	FBXL19	Q6PCT2	694 aa		6.17	□□□□□ -1.42
UBR1-209	ENST00000569243	SAPCD2	Q86UD0	394 aa		6.17	□□□□□ -1.42
UBR1-209	ENST00000569243	ZNF655	Q8N720	491 aa	Predicted RBP	6.17	□□□□□ -1.42
UBR1-209	ENST00000569243	KIF2C	Q99661	725 aa		6.17	□□□□□ -1.42
UBR1-209	ENST00000569243	TCFL5	Q9UL49	500 aa		6.17	□□□□□ -1.42
UBR1-209	ENST00000569243	SH3D21	A4FU49	640 aa		6.16	□□□□□ -1.42
UBR1-209	ENST00000569243		F6X3S4	739 aa		6.16	□□□□□ -1.42
UBR1-209	ENST00000569243	DNAJA2	O60884	412 aa		6.16	□□□□□ -1.42
UBR1-209	ENST00000569243	PRKCA	P17252	672 aa		6.16	□□□□□ -1.42
UBR1-209	ENST00000569243	CYP4F8	P98187	520 aa		6.16	□□□□□ -1.42
UBR1-209	ENST00000569243	FAM160A1	Q05DH4	1040 aa		6.16	□□□□□ -1.42
UBR1-209	ENST00000569243	NMI	Q13287	307 aa	Predicted RBP	6.16	□□□□□ -1.42
UBR1-209	ENST00000569243	ZNF326	Q5BKZ1	582 aa	Known RBP	6.16	□□□□□ -1.42
UBR1-209	ENST00000569243	ZC3H14	Q6PJT7	736 aa	Known RBP	6.16	□□□□□ -1.42
UBR1-209	ENST00000569243	TNFRSF12A	Q9NP84	129 aa		6.16	□□□□□ -1.42
UBR1-209	ENST00000569243	WTIP	A6NIX2	430 aa	Predicted RBP	6.15	□□□□□ -1.42
UBR1-209	ENST00000569243	UBOX5	O94941	541 aa		6.15	□□□□□ -1.42
UBR1-209	ENST00000569243	RAG1	P15918	1043 aa		6.15	□□□□□ -1.42
UBR1-209	ENST00000569243	PCBP3	P57721	371 aa	Known RBP	6.15	□□□□□ -1.42
UBR1-209	ENST00000569243	TAGLN	Q01995	201 aa	Known RBP	6.15	□□□□□ -1.42
UBR1-209	ENST00000569243	TARBP2	Q15633	366 aa	Known RBP	6.15	□□□□□ -1.42
UBR1-209	ENST00000569243	LRRFIP1	Q32MZ4	808 aa	Known RBP	6.15	□□□□□ -1.42
UBR1-209	ENST00000569243	FBXO27	Q8NI29	283 aa		6.15	□□□□□ -1.42
UBR1-209	ENST00000569243	HDAC8	Q9BY41	377 aa		6.15	□□□□□ -1.42
UBR1-209	ENST00000569243	CNNM2	Q9H8M5	875 aa		6.15	□□□□□ -1.42
UBR1-209	ENST00000569243	ST6GALNAC2	Q9UJ37	374 aa		6.15	□□□□□ -1.42
UBR1-209	ENST00000569243	GPR55	Q9Y2T6	319 aa	Predicted RBP	6.15	□□□□□ -1.42
UBR1-209	ENST00000569243	PCDHB14	Q9Y5E9	798 aa		6.15	□□□□□ -1.42
UBR1-209	ENST00000569243	FADS2P1	A8MWK0	482 aa		6.14	□□□□□ -1.43
UBR1-209	ENST00000569243	ENDOU	P21128	410 aa	Known RBP	6.14	□□□□□ -1.43
UBR1-209	ENST00000569243	DLX2	Q07687	328 aa	Predicted RBP	6.14	□□□□□ -1.43
UBR1-209	ENST00000569243	KLF10	Q13118	480 aa		6.14	□□□□□ -1.43
UBR1-209	ENST00000569243	MRPL58	Q14197	206 aa	Known RBP	6.14	□□□□□ -1.43
UBR1-209	ENST00000569243	NBPF9	Q3BBW0	867 aa		6.14	□□□□□ -1.43
UBR1-209	ENST00000569243	ARSH	Q5FYA8	562 aa		6.14	□□□□□ -1.43
UBR1-209	ENST00000569243	NBPF12	Q5TAG4	269 aa	Predicted RBP	6.14	□□□□□ -1.43
UBR1-209	ENST00000569243	HS2ST1	Q7LGA3	356 aa		6.14	□□□□□ -1.43
UBR1-209	ENST00000569243	CARF	Q8N187	725 aa		6.14	□□□□□ -1.43
UBR1-209	ENST00000569243	LINC00116	Q8NCU8	138 aa		6.14	□□□□□ -1.43
UBR1-209	ENST00000569243	NUP43	Q8NFH3	380 aa		6.14	□□□□□ -1.43
UBR1-209	ENST00000569243	ZNF296	Q8WUU4	475 aa	Predicted RBP	6.14	□□□□□ -1.43
UBR1-209	ENST00000569243	TCTN2	Q96GX1	697 aa		6.14	□□□□□ -1.43
UBR1-209	ENST00000569243	ZNF747	Q9BV97	191 aa		6.14	□□□□□ -1.43
UBR1-209	ENST00000569243	VPS11	Q9H270	941 aa		6.14	□□□□□ -1.43
UBR1-209	ENST00000569243	BRMS1	Q9HCU9	246 aa		6.14	□□□□□ -1.43
UBR1-209	ENST00000569243	TNFRSF10D	Q9UBN6	386 aa		6.14	□□□□□ -1.43

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