RNA–Protein interactions for RNA: ENST00000568903.5

TNRC6A-215, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 2

Gene TNRC6A, Length 943 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-215ENST00000568903 PRDM5Q9NQX1 630 aaPredicted RBP11.73□□□□□ -0.53
TNRC6A-215ENST00000568903 CLIP2Q9UDT6 1046 aa11.73□□□□□ -0.53
TNRC6A-215ENST00000568903 ZNF236Q9UL36 1845 aa11.73□□□□□ -0.53
TNRC6A-215ENST00000568903 MYH7P12883 1935 aa11.72□□□□□ -0.53
TNRC6A-215ENST00000568903 IGKV6D-41A0A0C4DH26 115 aa11.72□□□□□ -0.53
TNRC6A-215ENST00000568903 TRIM43BA6NCK2 446 aa11.72□□□□□ -0.53
TNRC6A-215ENST00000568903 MSCO60682 206 aa11.72□□□□□ -0.53
TNRC6A-215ENST00000568903 ZNF865P0CJ78 1059 aaPredicted RBP11.72□□□□□ -0.53
TNRC6A-215ENST00000568903 SHHQ15465 462 aa11.72□□□□□ -0.53
TNRC6A-215ENST00000568903 SBK1Q52WX2 424 aa11.72□□□□□ -0.53
TNRC6A-215ENST00000568903 ZSCAN25Q6NSZ9 544 aa11.72□□□□□ -0.53
TNRC6A-215ENST00000568903 AMOTL1Q8IY63 956 aa11.72□□□□□ -0.53
TNRC6A-215ENST00000568903 ABRAQ8N0Z2 381 aa11.72□□□□□ -0.53
TNRC6A-215ENST00000568903 ARRDC4Q8NCT1 418 aa11.72□□□□□ -0.53
TNRC6A-215ENST00000568903 APPBP2Q92624 585 aa11.72□□□□□ -0.53
TNRC6A-215ENST00000568903 BADQ92934 168 aa11.72□□□□□ -0.53
TNRC6A-215ENST00000568903 TRIM43Q96BQ3 446 aaPredicted RBP11.72□□□□□ -0.53
TNRC6A-215ENST00000568903 TINF2Q9BSI4 451 aa11.72□□□□□ -0.53
TNRC6A-215ENST00000568903 MKNK2Q9HBH9 465 aa11.72□□□□□ -0.53
TNRC6A-215ENST00000568903 NPDC1Q9NQX5 325 aaPredicted RBP11.72□□□□□ -0.53
TNRC6A-215ENST00000568903 ARPP21Q9UBL0 812 aaPredicted RBP11.72□□□□□ -0.53
TNRC6A-215ENST00000568903 TACC3Q9Y6A5 838 aa11.72□□□□□ -0.53
TNRC6A-215ENST00000568903 CDH23Q9H251 3354 aa11.72□□□□□ -0.53
TNRC6A-215ENST00000568903 SMCHD1A6NHR9 2005 aa11.72□□□□□ -0.53
TNRC6A-215ENST00000568903 ZNFX1Q9P2E3 1918 aaKnown RBP11.72□□□□□ -0.53
TNRC6A-215ENST00000568903 GREB1LQ9C091 1923 aaPredicted RBP11.71□□□□□ -0.53
TNRC6A-215ENST00000568903 DLL1O00548 723 aa11.71□□□□□ -0.53
TNRC6A-215ENST00000568903 ADCY6O43306 1168 aa11.71□□□□□ -0.53
TNRC6A-215ENST00000568903 SLC25A27O95847 323 aa11.71□□□□□ -0.53
TNRC6A-215ENST00000568903 SNAI1O95863 264 aaPredicted RBP11.71□□□□□ -0.53
TNRC6A-215ENST00000568903 APPP05067 770 aa11.71□□□□□ -0.53
TNRC6A-215ENST00000568903 HOXB3P14651 431 aaPredicted RBP11.71□□□□□ -0.53
TNRC6A-215ENST00000568903 EPHB4P54760 987 aa11.71□□□□□ -0.53
TNRC6A-215ENST00000568903 RASGRP2Q7LDG7 609 aa11.71□□□□□ -0.53
TNRC6A-215ENST00000568903 CPXCR1Q8N123 301 aa11.71□□□□□ -0.53
TNRC6A-215ENST00000568903 LRRC47Q8N1G4 583 aaKnown RBP11.71□□□□□ -0.53
TNRC6A-215ENST00000568903 PI4K2BQ8TCG2 481 aa11.71□□□□□ -0.53
TNRC6A-215ENST00000568903 CEP95Q96GE4 821 aa11.71□□□□□ -0.53
TNRC6A-215ENST00000568903 DDRGK1Q96HY6 314 aa11.71□□□□□ -0.53
TNRC6A-215ENST00000568903 LBHD1Q9BQE6 289 aaPredicted RBP11.71□□□□□ -0.53
TNRC6A-215ENST00000568903 SLF1Q9BQI6 1058 aa11.71□□□□□ -0.53
TNRC6A-215ENST00000568903 RAVER2Q9HCJ3 691 aaKnown RBP11.71□□□□□ -0.53
TNRC6A-215ENST00000568903 GOPCQ9HD26 462 aa11.71□□□□□ -0.53
TNRC6A-215ENST00000568903 DDX49Q9Y6V7 483 aaKnown RBP11.71□□□□□ -0.53
TNRC6A-215ENST00000568903 MYADML2A6NDP7 307 aa11.7□□□□□ -0.54
TNRC6A-215ENST00000568903 KBTBD13C9JR72 458 aa11.7□□□□□ -0.54
TNRC6A-215ENST00000568903 POTEB2H3BUK9 544 aa11.7□□□□□ -0.54
TNRC6A-215ENST00000568903 FOXP2O15409 715 aa11.7□□□□□ -0.54
TNRC6A-215ENST00000568903 PTGS1P23219 599 aa11.7□□□□□ -0.54
TNRC6A-215ENST00000568903 TDO2P48775 406 aa11.7□□□□□ -0.54
TNRC6A-215ENST00000568903 TLE2Q04725 743 aa11.7□□□□□ -0.54
TNRC6A-215ENST00000568903 KCTD2Q14681 263 aa11.7□□□□□ -0.54
TNRC6A-215ENST00000568903 SNX17Q15036 470 aa11.7□□□□□ -0.54
TNRC6A-215ENST00000568903 SNRNP48Q6IEG0 339 aaKnown RBP11.7□□□□□ -0.54
TNRC6A-215ENST00000568903 CCDC129Q6ZRS4 1044 aa11.7□□□□□ -0.54
TNRC6A-215ENST00000568903 PARP9Q8IXQ6 854 aa11.7□□□□□ -0.54
TNRC6A-215ENST00000568903 IFNL3Q8IZI9 196 aa11.7□□□□□ -0.54
TNRC6A-215ENST00000568903 ZDHHC16Q969W1 377 aa11.7□□□□□ -0.54
TNRC6A-215ENST00000568903 KIFC2Q96AC6 838 aa11.7□□□□□ -0.54
TNRC6A-215ENST00000568903 FGD4Q96M96 766 aa11.7□□□□□ -0.54
TNRC6A-215ENST00000568903 GUCD1Q96NT3 240 aa11.7□□□□□ -0.54
TNRC6A-215ENST00000568903 CHMP4BQ9H444 224 aaKnown RBP11.7□□□□□ -0.54
TNRC6A-215ENST00000568903 XPNPEP3Q9NQH7 507 aa11.7□□□□□ -0.54
TNRC6A-215ENST00000568903 PDLIM7Q9NR12 457 aa11.7□□□□□ -0.54
TNRC6A-215ENST00000568903 NYAP2Q9P242 653 aa11.7□□□□□ -0.54
TNRC6A-215ENST00000568903 LTBP2Q14767 1821 aa11.7□□□□□ -0.54
TNRC6A-215ENST00000568903 ROBO3Q96MS0 1386 aa11.69□□□□□ -0.54
TNRC6A-215ENST00000568903 PATL2C9JE40 543 aaKnown RBP11.69□□□□□ -0.54
TNRC6A-215ENST00000568903 SNAP25P60880 206 aa11.69□□□□□ -0.54
TNRC6A-215ENST00000568903 TSR1Q2NL82 804 aaKnown RBP11.69□□□□□ -0.54
TNRC6A-215ENST00000568903 GPR153Q6NV75 609 aa11.69□□□□□ -0.54
TNRC6A-215ENST00000568903 GIMAP6Q6P9H5 292 aa11.69□□□□□ -0.54
TNRC6A-215ENST00000568903 IL27Q8NEV9 243 aa11.69□□□□□ -0.54
TNRC6A-215ENST00000568903 SLC5A4Q9NY91 659 aa11.69□□□□□ -0.54
TNRC6A-215ENST00000568903 MTMR4Q9NYA4 1195 aa11.69□□□□□ -0.54
TNRC6A-215ENST00000568903 PHF24Q9UPV7 400 aa11.69□□□□□ -0.54
TNRC6A-215ENST00000568903 VCANP13611 3396 aa11.68□□□□□ -0.54
TNRC6A-215ENST00000568903 PRUNE2Q8WUY3 3088 aa11.68□□□□□ -0.54
TNRC6A-215ENST00000568903 DNAJC25-GNG10A0A024R161 153 aa11.68□□□□□ -0.54
TNRC6A-215ENST00000568903 A0A1W2PQ45 241 aaPredicted RBP11.68□□□□□ -0.54
TNRC6A-215ENST00000568903 A0A1W2PQY0 241 aa11.68□□□□□ -0.54
TNRC6A-215ENST00000568903 NMT2O60551 498 aa11.68□□□□□ -0.54
TNRC6A-215ENST00000568903 ADAMTS4O75173 837 aa11.68□□□□□ -0.54
TNRC6A-215ENST00000568903 NUDT7P0C024 238 aa11.68□□□□□ -0.54
TNRC6A-215ENST00000568903 RARBP10826 455 aa11.68□□□□□ -0.54
TNRC6A-215ENST00000568903 ZNF444Q8N0Y2 327 aaPredicted RBP11.68□□□□□ -0.54
TNRC6A-215ENST00000568903 ZNF710Q8N1W2 664 aa11.68□□□□□ -0.54
TNRC6A-215ENST00000568903 ZNF454Q8N9F8 522 aa11.68□□□□□ -0.54
TNRC6A-215ENST00000568903 PRPF38AQ8NAV1 312 aaKnown RBP11.68□□□□□ -0.54
TNRC6A-215ENST00000568903 MKL1Q969V6 931 aa11.68□□□□□ -0.54
TNRC6A-215ENST00000568903 TEX13BQ9BXU2 312 aa11.68□□□□□ -0.54
TNRC6A-215ENST00000568903 PRKAG2Q9UGJ0 569 aa11.68□□□□□ -0.54
TNRC6A-215ENST00000568903 STXBP5LQ9Y2K9 1186 aa11.68□□□□□ -0.54
TNRC6A-215ENST00000568903 PLXNA1Q9UIW2 1896 aa11.68□□□□□ -0.54
TNRC6A-215ENST00000568903 SYNRGQ9UMZ2 1314 aa11.67□□□□□ -0.54
TNRC6A-215ENST00000568903 PQBP1O60828 265 aaKnown RBP11.67□□□□□ -0.54
TNRC6A-215ENST00000568903 TFAP4Q01664 338 aa11.67□□□□□ -0.54
TNRC6A-215ENST00000568903 CNTN2Q02246 1040 aa11.67□□□□□ -0.54
TNRC6A-215ENST00000568903 CTDSPL2Q05D32 466 aa11.67□□□□□ -0.54
TNRC6A-215ENST00000568903 ARSIQ5FYB1 569 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms