RNA–Protein interactions for RNA: ENST00000568848.5

USB1-214, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-214ENST00000568848 ZBTB40Q9NUA8 1239 aa17.81■□□□□ 0.44
USB1-214ENST00000568848 ISY1Q9ULR0 285 aaKnown RBP17.81■□□□□ 0.44
USB1-214ENST00000568848 YBX2Q9Y2T7 364 aaKnown RBP17.81■□□□□ 0.44
USB1-214ENST00000568848 XIRP2A4UGR9 3374 aa17.8■□□□□ 0.44
USB1-214ENST00000568848 SYNGAP1Q96PV0 1343 aa17.8■□□□□ 0.44
USB1-214ENST00000568848 M0R2C6 588 aa17.8■□□□□ 0.44
USB1-214ENST00000568848 DUSP11O75319 330 aaKnown RBP17.8■□□□□ 0.44
USB1-214ENST00000568848 MYOGP15173 224 aa17.8■□□□□ 0.44
USB1-214ENST00000568848 RABGGTBP53611 331 aa17.8■□□□□ 0.44
USB1-214ENST00000568848 TJAP1Q5JTD0 557 aa17.8■□□□□ 0.44
USB1-214ENST00000568848 CXCL17Q6UXB2 119 aa17.8■□□□□ 0.44
USB1-214ENST00000568848 MAMDC4Q6UXC1 1216 aa17.8■□□□□ 0.44
USB1-214ENST00000568848 FAM126BQ8IXS8 530 aa17.8■□□□□ 0.44
USB1-214ENST00000568848 CCDC144CPQ8IYA2 1237 aa17.8■□□□□ 0.44
USB1-214ENST00000568848 NUP133Q8WUM0 1156 aa17.8■□□□□ 0.44
USB1-214ENST00000568848 CEP95Q96GE4 821 aa17.8■□□□□ 0.44
USB1-214ENST00000568848 GLT1D1Q96MS3 346 aa17.8■□□□□ 0.44
USB1-214ENST00000568848 LRRC37A2A6NM11 1700 aa17.8■□□□□ 0.44
USB1-214ENST00000568848 TCF20Q9UGU0 1960 aaKnown RBP17.79■□□□□ 0.44
USB1-214ENST00000568848 IGKV6D-41A0A0C4DH26 115 aa17.79■□□□□ 0.44
USB1-214ENST00000568848 MOXD2PA6NHM9 499 aa17.79■□□□□ 0.44
USB1-214ENST00000568848 COL9A1P20849 921 aa17.79■□□□□ 0.44
USB1-214ENST00000568848 IGFBP4P22692 258 aa17.79■□□□□ 0.44
USB1-214ENST00000568848 CCL23P55773 120 aa17.79■□□□□ 0.44
USB1-214ENST00000568848 PSMC6P62333 389 aa17.79■□□□□ 0.44
USB1-214ENST00000568848 GNASQ5JWF2 1037 aa17.79■□□□□ 0.44
USB1-214ENST00000568848 C20orf194Q5TEA3 1177 aa17.79■□□□□ 0.44
USB1-214ENST00000568848 EEPD1Q7L9B9 569 aa17.79■□□□□ 0.44
USB1-214ENST00000568848 ANKRD35Q8N283 1001 aa17.79■□□□□ 0.44
USB1-214ENST00000568848 MKNK2Q9HBH9 465 aa17.79■□□□□ 0.44
USB1-214ENST00000568848 ARPP21Q9UBL0 812 aaPredicted RBP17.79■□□□□ 0.44
USB1-214ENST00000568848 TMEM265A0A087WTH1 108 aa17.78■□□□□ 0.44
USB1-214ENST00000568848 SOWAHBA6NEL2 793 aa17.78■□□□□ 0.44
USB1-214ENST00000568848 ARVCFO00192 962 aa17.78■□□□□ 0.44
USB1-214ENST00000568848 RASIP1Q5U651 963 aa17.78■□□□□ 0.44
USB1-214ENST00000568848 OTOP2Q7RTS6 562 aa17.78■□□□□ 0.44
USB1-214ENST00000568848 RPAP2Q8IXW5 612 aaPredicted RBP17.78■□□□□ 0.44
USB1-214ENST00000568848 MICALL1Q8N3F8 863 aa17.78■□□□□ 0.44
USB1-214ENST00000568848 DDRGK1Q96HY6 314 aa17.78■□□□□ 0.44
USB1-214ENST00000568848 AGBL1Q96MI9 1066 aa17.78■□□□□ 0.44
USB1-214ENST00000568848 SEC62Q99442 399 aaKnown RBP17.78■□□□□ 0.44
USB1-214ENST00000568848 UPF3AQ9H1J1 476 aaKnown RBP17.78■□□□□ 0.44
USB1-214ENST00000568848 INCENPQ9NQS7 918 aa17.78■□□□□ 0.44
USB1-214ENST00000568848 PDGFCQ9NRA1 345 aa17.78■□□□□ 0.44
USB1-214ENST00000568848 BDP1A6H8Y1 2624 aa17.78■□□□□ 0.44
USB1-214ENST00000568848 NCOR1O75376 2440 aa17.78■□□□□ 0.44
USB1-214ENST00000568848 GRIN2DO15399 1336 aa17.77■□□□□ 0.44
USB1-214ENST00000568848 LCTP09848 1927 aa17.77■□□□□ 0.44
USB1-214ENST00000568848 A0A0U1RQG5 324 aaPredicted RBP17.77■□□□□ 0.44
USB1-214ENST00000568848 TNFRSF10AO00220 468 aa17.77■□□□□ 0.44
USB1-214ENST00000568848 ZBED4O75132 1171 aa17.77■□□□□ 0.44
USB1-214ENST00000568848 RAB11FIP3O75154 756 aa17.77■□□□□ 0.44
USB1-214ENST00000568848 HMMRO75330 724 aa17.77■□□□□ 0.44
USB1-214ENST00000568848 CST5P28325 142 aaPredicted RBP17.77■□□□□ 0.44
USB1-214ENST00000568848 GJA9P57773 515 aa17.77■□□□□ 0.44
USB1-214ENST00000568848 PPIGQ13427 754 aaKnown RBP eCLIP17.77■□□□□ 0.441e-8■□□□□ 8.5
USB1-214ENST00000568848 NOL8Q76FK4 1167 aaKnown RBP17.77■□□□□ 0.44
USB1-214ENST00000568848 PRPF38AQ8NAV1 312 aaKnown RBP17.77■□□□□ 0.44
USB1-214ENST00000568848 TRPV6Q9H1D0 765 aa17.77■□□□□ 0.44
USB1-214ENST00000568848 SLC38A10Q9HBR0 1119 aa17.77■□□□□ 0.44
USB1-214ENST00000568848 NYAP2Q9P242 653 aa17.77■□□□□ 0.44
USB1-214ENST00000568848 CTDP1Q9Y5B0 961 aaPredicted RBP17.77■□□□□ 0.44
USB1-214ENST00000568848 COPB2P35606 906 aa17.76■□□□□ 0.43
USB1-214ENST00000568848 CCDC174Q6PII3 467 aa17.76■□□□□ 0.43
USB1-214ENST00000568848 VWCEQ96DN2 955 aa17.76■□□□□ 0.43
USB1-214ENST00000568848 SCLYQ96I15 445 aa17.76■□□□□ 0.43
USB1-214ENST00000568848 WNT8AQ9H1J5 351 aa17.76■□□□□ 0.43
USB1-214ENST00000568848 MTMR7Q9Y216 660 aa17.76■□□□□ 0.43
USB1-214ENST00000568848 ELP1O95163 1332 aa17.75■□□□□ 0.43
USB1-214ENST00000568848 RFXAPO00287 272 aa17.75■□□□□ 0.43
USB1-214ENST00000568848 GPAA1O43292 621 aa17.75■□□□□ 0.43
USB1-214ENST00000568848 CD4P01730 458 aa17.75■□□□□ 0.43
USB1-214ENST00000568848 TDO2P48775 406 aa17.75■□□□□ 0.43
USB1-214ENST00000568848 SBK1Q52WX2 424 aa17.75■□□□□ 0.43
USB1-214ENST00000568848 MUM1L1Q5H9M0 696 aa17.75■□□□□ 0.43
USB1-214ENST00000568848 SLFN13Q68D06 897 aa17.75■□□□□ 0.43
USB1-214ENST00000568848 FBXO16Q8IX29 292 aaPredicted RBP17.75■□□□□ 0.43
USB1-214ENST00000568848 MSL3Q8N5Y2 521 aaKnown RBP17.75■□□□□ 0.43
USB1-214ENST00000568848 ADAMTS19Q8TE59 1207 aa17.75■□□□□ 0.43
USB1-214ENST00000568848 SYMPKQ92797 1274 aaKnown RBP17.75■□□□□ 0.43
USB1-214ENST00000568848 GAS2L1Q99501 681 aaPredicted RBP17.75■□□□□ 0.43
USB1-214ENST00000568848 ABHD16BQ9H3Z7 469 aa17.75■□□□□ 0.43
USB1-214ENST00000568848 A1CFQ9NQ94 594 aaKnown RBP17.75■□□□□ 0.43
USB1-214ENST00000568848 ZNF536O15090 1300 aa17.74■□□□□ 0.43
USB1-214ENST00000568848 SCN5AQ14524 2016 aa17.74■□□□□ 0.43
USB1-214ENST00000568848 TMEM232C9JQI7 657 aa17.74■□□□□ 0.43
USB1-214ENST00000568848 SMPD1P17405 629 aa17.74■□□□□ 0.43
USB1-214ENST00000568848 TFF2Q03403 129 aa17.74■□□□□ 0.43
USB1-214ENST00000568848 ZNF467Q7Z7K2 595 aaPredicted RBP17.74■□□□□ 0.43
USB1-214ENST00000568848 TMEM199Q8N511 208 aa17.74■□□□□ 0.43
USB1-214ENST00000568848 FAM133AQ8N9E0 248 aa17.74■□□□□ 0.43
USB1-214ENST00000568848 PCSK9Q8NBP7 692 aaKnown RBP17.74■□□□□ 0.43
USB1-214ENST00000568848 IL23AQ9NPF7 189 aa17.74■□□□□ 0.43
USB1-214ENST00000568848 RNF146Q9NTX7 359 aa17.74■□□□□ 0.43
USB1-214ENST00000568848 MTMR4Q9NYA4 1195 aa17.74■□□□□ 0.43
USB1-214ENST00000568848 ATP2A1O14983 1001 aa17.73■□□□□ 0.43
USB1-214ENST00000568848 B4GALT4O60513 344 aa17.73■□□□□ 0.43
USB1-214ENST00000568848 NMT2O60551 498 aa17.73■□□□□ 0.43
USB1-214ENST00000568848 APPP05067 770 aa17.73■□□□□ 0.43
USB1-214ENST00000568848 TNFAIP2Q03169 654 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms