RNA–Protein interactions for RNA: ENST00000568186.5

TCF4-239, Transcript of transcription factor 4, humanhuman

TSL 2

Gene TCF4, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-239ENST00000568186 PCDHB14Q9Y5E9 798 aa4.92□□□□□ -1.62
TCF4-239ENST00000568186 PCDHA5Q9Y5H7 936 aa4.92□□□□□ -1.62
TCF4-239ENST00000568186 TAF6LQ9Y6J9 622 aa4.92□□□□□ -1.62
TCF4-239ENST00000568186 SSU72P8A0A1W2PR75 194 aa4.91□□□□□ -1.62
TCF4-239ENST00000568186 FADS2P1A8MWK0 482 aa4.91□□□□□ -1.62
TCF4-239ENST00000568186 RGS13O14921 159 aa4.91□□□□□ -1.62
TCF4-239ENST00000568186 PRAMEF1O95521 474 aa4.91□□□□□ -1.62
TCF4-239ENST00000568186 MPOP05164 745 aa4.91□□□□□ -1.62
TCF4-239ENST00000568186 IMPDH2P12268 514 aa4.91□□□□□ -1.62
TCF4-239ENST00000568186 RAG1P15918 1043 aa4.91□□□□□ -1.62
TCF4-239ENST00000568186 GBP1P32455 592 aa4.91□□□□□ -1.62
TCF4-239ENST00000568186 CRKP46108 304 aa4.91□□□□□ -1.62
TCF4-239ENST00000568186 LRRFIP1Q32MZ4 808 aaKnown RBP4.91□□□□□ -1.62
TCF4-239ENST00000568186 SEZ6Q53EL9 994 aa4.91□□□□□ -1.62
TCF4-239ENST00000568186 GALNT18Q6P9A2 607 aa4.91□□□□□ -1.62
TCF4-239ENST00000568186 NKD1Q969G9 470 aa4.91□□□□□ -1.62
TCF4-239ENST00000568186 EHMT1Q9H9B1 1298 aa4.91□□□□□ -1.62
TCF4-239ENST00000568186 IGSF5Q9NSI5 407 aa4.91□□□□□ -1.62
TCF4-239ENST00000568186 UBP1Q9NZI7 540 aa4.91□□□□□ -1.62
TCF4-239ENST00000568186 USP35Q9P2H5 1018 aa4.91□□□□□ -1.62
TCF4-239ENST00000568186 MEIS3P2A8K0S8 358 aa4.9□□□□□ -1.63
TCF4-239ENST00000568186 PRICKLE3O43900 615 aaPredicted RBP4.9□□□□□ -1.63
TCF4-239ENST00000568186 ARL4AP40617 200 aa4.9□□□□□ -1.63
TCF4-239ENST00000568186 CCNFP41002 786 aa4.9□□□□□ -1.63
TCF4-239ENST00000568186 NCKAP1LP55160 1127 aa4.9□□□□□ -1.63
TCF4-239ENST00000568186 RAD51AP2Q09MP3 1159 aa4.9□□□□□ -1.63
TCF4-239ENST00000568186 RAB3GAP1Q15042 981 aa4.9□□□□□ -1.63
TCF4-239ENST00000568186 NBPF9Q3BBW0 867 aa4.9□□□□□ -1.63
TCF4-239ENST00000568186 OVOS1Q6IE37 1185 aa4.9□□□□□ -1.63
TCF4-239ENST00000568186 SLCO6A1Q86UG4 719 aa4.9□□□□□ -1.63
TCF4-239ENST00000568186 SLITRK4Q8IW52 837 aa4.9□□□□□ -1.63
TCF4-239ENST00000568186 SPATA32Q96LK8 384 aa4.9□□□□□ -1.63
TCF4-239ENST00000568186 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.9□□□□□ -1.63
TCF4-239ENST00000568186 TNFRSF12AQ9NP84 129 aa4.9□□□□□ -1.63
TCF4-239ENST00000568186 TNFRSF10DQ9UBN6 386 aa4.9□□□□□ -1.63
TCF4-239ENST00000568186 MINPP1Q9UNW1 487 aa4.9□□□□□ -1.63
TCF4-239ENST00000568186 NUDT19A8MXV4 375 aa4.89□□□□□ -1.63
TCF4-239ENST00000568186 FFAR3O14843 346 aa4.89□□□□□ -1.63
TCF4-239ENST00000568186 SIGLEC6O43699 453 aa4.89□□□□□ -1.63
TCF4-239ENST00000568186 BUB1BO60566 1050 aaPredicted RBP4.89□□□□□ -1.63
TCF4-239ENST00000568186 HMGB1P09429 215 aaKnown RBP4.89□□□□□ -1.63
TCF4-239ENST00000568186 PRKCAP17252 672 aa4.89□□□□□ -1.63
TCF4-239ENST00000568186 MCM4P33991 863 aa4.89□□□□□ -1.63
TCF4-239ENST00000568186 CEBPAP49715 358 aaPredicted RBP4.89□□□□□ -1.63
TCF4-239ENST00000568186 PLP2Q04941 152 aa4.89□□□□□ -1.63
TCF4-239ENST00000568186 TMEM62Q0P6H9 643 aa4.89□□□□□ -1.63
TCF4-239ENST00000568186 COL9A2Q14055 689 aaPredicted RBP4.89□□□□□ -1.63
TCF4-239ENST00000568186 RTP5Q14D33 572 aa4.89□□□□□ -1.63
TCF4-239ENST00000568186 ZXDCQ2QGD7 858 aaPredicted RBP4.89□□□□□ -1.63
TCF4-239ENST00000568186 ARSHQ5FYA8 562 aa4.89□□□□□ -1.63
TCF4-239ENST00000568186 NBPF12Q5TAG4 269 aaPredicted RBP4.89□□□□□ -1.63
TCF4-239ENST00000568186 CDCP2Q5VXM1 449 aa4.89□□□□□ -1.63
TCF4-239ENST00000568186 RPTNQ6XPR3 784 aa4.89□□□□□ -1.63
TCF4-239ENST00000568186 NLRC3Q7RTR2 1065 aa4.89□□□□□ -1.63
TCF4-239ENST00000568186 ZNF654Q8IZM8 581 aa4.89□□□□□ -1.63
TCF4-239ENST00000568186 MRRFQ96E11 262 aaKnown RBP4.89□□□□□ -1.63
TCF4-239ENST00000568186 ERVK13-1Q9NX77 482 aa4.89□□□□□ -1.63
TCF4-239ENST00000568186 WTIPA6NIX2 430 aaPredicted RBP4.88□□□□□ -1.63
TCF4-239ENST00000568186 IGFBP6P24592 240 aaPredicted RBP4.88□□□□□ -1.63
TCF4-239ENST00000568186 POLR2BP30876 1174 aaKnown RBP4.88□□□□□ -1.63
TCF4-239ENST00000568186 LIMS1P48059 325 aa4.88□□□□□ -1.63
TCF4-239ENST00000568186 LAPTM5Q13571 262 aa4.88□□□□□ -1.63
TCF4-239ENST00000568186 PLEKHN1Q494U1 663 aaPredicted RBP4.88□□□□□ -1.63
TCF4-239ENST00000568186 ZNF394Q53GI3 561 aa4.88□□□□□ -1.63
TCF4-239ENST00000568186 GK5Q6ZS86 529 aa4.88□□□□□ -1.63
TCF4-239ENST00000568186 EAF1Q96JC9 268 aaPredicted RBP4.88□□□□□ -1.63
TCF4-239ENST00000568186 CNNM2Q9H8M5 875 aa4.88□□□□□ -1.63
TCF4-239ENST00000568186 DDX41Q9UJV9 622 aaKnown RBP4.88□□□□□ -1.63
TCF4-239ENST00000568186 PCDHGB7Q9Y5F8 929 aa4.88□□□□□ -1.63
TCF4-239ENST00000568186 SLURP1P55000 103 aa4.87□□□□□ -1.63
TCF4-239ENST00000568186 CYP4F8P98187 520 aa4.87□□□□□ -1.63
TCF4-239ENST00000568186 CAP1Q01518 475 aa4.87□□□□□ -1.63
TCF4-239ENST00000568186 PUM1Q14671 1186 aaKnown RBP eCLIP4.87□□□□□ -1.63
TCF4-239ENST00000568186 CBX2Q14781 532 aaPredicted RBP4.87□□□□□ -1.63
TCF4-239ENST00000568186 NUP43Q8NFH3 380 aa4.87□□□□□ -1.63
TCF4-239ENST00000568186 FERD3LQ96RJ6 166 aa4.87□□□□□ -1.63
TCF4-239ENST00000568186 PRDM14Q9GZV8 571 aa4.87□□□□□ -1.63
TCF4-239ENST00000568186 ZNRF3Q9ULT6 936 aa4.87□□□□□ -1.63
TCF4-239ENST00000568186 A0A1W2PQ45 241 aaPredicted RBP4.86□□□□□ -1.63
TCF4-239ENST00000568186 A0A1W2PQY0 241 aa4.86□□□□□ -1.63
TCF4-239ENST00000568186 TNFRSF10CO14798 259 aa4.86□□□□□ -1.63
TCF4-239ENST00000568186 CLEC3AO75596 197 aa4.86□□□□□ -1.63
TCF4-239ENST00000568186 ZNF205O95201 554 aa4.86□□□□□ -1.63
TCF4-239ENST00000568186 INSRRP14616 1297 aa4.86□□□□□ -1.63
TCF4-239ENST00000568186 NME1P15531 152 aaKnown RBP4.86□□□□□ -1.63
TCF4-239ENST00000568186 KCNC1P48547 511 aa4.86□□□□□ -1.63
TCF4-239ENST00000568186 ZNF200P98182 395 aaPredicted RBP4.86□□□□□ -1.63
TCF4-239ENST00000568186 CLCQ05315 142 aa4.86□□□□□ -1.63
TCF4-239ENST00000568186 HHIPL2Q6UWX4 724 aa4.86□□□□□ -1.63
TCF4-239ENST00000568186 TAB3Q8N5C8 712 aaPredicted RBP4.86□□□□□ -1.63
TCF4-239ENST00000568186 ATG4CQ96DT6 458 aa4.86□□□□□ -1.63
TCF4-239ENST00000568186 ZNF512BQ96KM6 892 aaPredicted RBP4.86□□□□□ -1.63
TCF4-239ENST00000568186 CDADC1Q9BWV3 514 aa4.86□□□□□ -1.63
TCF4-239ENST00000568186 CHST7Q9NS84 486 aa4.86□□□□□ -1.63
TCF4-239ENST00000568186 KIAA1522Q9P206 1035 aaPredicted RBP4.86□□□□□ -1.63
TCF4-239ENST00000568186 IMPACTQ9P2X3 320 aa4.86□□□□□ -1.63
TCF4-239ENST00000568186 ACSL6Q9UKU0 697 aa4.86□□□□□ -1.63
TCF4-239ENST00000568186 IRS2Q9Y4H2 1338 aa4.86□□□□□ -1.63
TCF4-239ENST00000568186 MEIS1O00470 390 aa4.85□□□□□ -1.63
TCF4-239ENST00000568186 HSP90B1P14625 803 aaKnown RBP4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms