RNA–Protein interactions for RNA: ENST00000567704.5

CSPG4P13-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

BASIC

Gene CSPG4P13, Length 4,801 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-202ENST00000567704 A1BGP04217 495 aa13.64□□□□□ -0.23
CSPG4P13-202ENST00000567704 SETSIPP0DME0 302 aa13.64□□□□□ -0.23
CSPG4P13-202ENST00000567704 PPP2R5EQ16537 467 aa13.64□□□□□ -0.23
CSPG4P13-202ENST00000567704 DHX40Q8IX18 779 aaKnown RBP13.64□□□□□ -0.23
CSPG4P13-202ENST00000567704 TCHPQ9BT92 498 aa13.64□□□□□ -0.23
CSPG4P13-202ENST00000567704 COMMD10Q9Y6G5 202 aa13.64□□□□□ -0.23
CSPG4P13-202ENST00000567704 USH1CQ9Y6N9 552 aa13.64□□□□□ -0.23
CSPG4P13-202ENST00000567704 FTCDO95954 541 aa13.63□□□□□ -0.23
CSPG4P13-202ENST00000567704 DHX9Q08211 1270 aaKnown RBP13.63□□□□□ -0.23
CSPG4P13-202ENST00000567704 EMBQ6PCB8 327 aa13.63□□□□□ -0.23
CSPG4P13-202ENST00000567704 MYOCDQ8IZQ8 938 aa13.63□□□□□ -0.23
CSPG4P13-202ENST00000567704 ZNF496Q96IT1 587 aaPredicted RBP13.63□□□□□ -0.23
CSPG4P13-202ENST00000567704 ZBTB21Q9ULJ3 1066 aa13.63□□□□□ -0.23
CSPG4P13-202ENST00000567704 USTQ9Y2C2 406 aa13.63□□□□□ -0.23
CSPG4P13-202ENST00000567704 MRFAP1Q9Y605 127 aa13.63□□□□□ -0.23
CSPG4P13-202ENST00000567704 PTCH1Q13635 1447 aa13.63□□□□□ -0.23
CSPG4P13-202ENST00000567704 EEF1GP26641 437 aaKnown RBP13.63□□□□□ -0.23
CSPG4P13-202ENST00000567704 POLE2P56282 527 aa13.63□□□□□ -0.23
CSPG4P13-202ENST00000567704 NR5A1Q13285 461 aa13.63□□□□□ -0.23
CSPG4P13-202ENST00000567704 ZMYM1Q5SVZ6 1142 aa13.63□□□□□ -0.23
CSPG4P13-202ENST00000567704 IFNL3Q8IZI9 196 aa13.63□□□□□ -0.23
CSPG4P13-202ENST00000567704 FMR1NBQ8N0W7 255 aaPredicted RBP13.63□□□□□ -0.23
CSPG4P13-202ENST00000567704 KIFAP3Q92845 792 aa13.63□□□□□ -0.23
CSPG4P13-202ENST00000567704 RILPQ96NA2 401 aa13.63□□□□□ -0.23
CSPG4P13-202ENST00000567704 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.63□□□□□ -0.23
CSPG4P13-202ENST00000567704 TRPM2O94759 1503 aa13.63□□□□□ -0.23
CSPG4P13-202ENST00000567704 RFC1P35251 1148 aaPredicted RBP13.63□□□□□ -0.23
CSPG4P13-202ENST00000567704 PDE1CQ14123 709 aaPredicted RBP13.63□□□□□ -0.23
CSPG4P13-202ENST00000567704 FAM47AQ5JRC9 791 aa13.63□□□□□ -0.23
CSPG4P13-202ENST00000567704 ARMC9Q7Z3E5 817 aa13.63□□□□□ -0.23
CSPG4P13-202ENST00000567704 RNF168Q8IYW5 571 aaPredicted RBP13.63□□□□□ -0.23
CSPG4P13-202ENST00000567704 CEP120Q8N960 986 aa13.63□□□□□ -0.23
CSPG4P13-202ENST00000567704 CFAP61Q8NHU2 1237 aa13.63□□□□□ -0.23
CSPG4P13-202ENST00000567704 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.63□□□□□ -0.23
CSPG4P13-202ENST00000567704 GPHNQ9NQX3 736 aaPredicted RBP13.63□□□□□ -0.23
CSPG4P13-202ENST00000567704 PLXNC1O60486 1568 aa13.63□□□□□ -0.23
CSPG4P13-202ENST00000567704 TECP42680 631 aa13.62□□□□□ -0.23
CSPG4P13-202ENST00000567704 ADCY1Q08828 1119 aa13.62□□□□□ -0.23
CSPG4P13-202ENST00000567704 DPH6Q7L8W6 267 aa13.62□□□□□ -0.23
CSPG4P13-202ENST00000567704 NHEJ1Q9H9Q4 299 aaPredicted RBP13.62□□□□□ -0.23
CSPG4P13-202ENST00000567704 AGTPBP1Q9UPW5 1226 aa13.62□□□□□ -0.23
CSPG4P13-202ENST00000567704 KDRP35968 1356 aa13.62□□□□□ -0.23
CSPG4P13-202ENST00000567704 CDC42BPBQ9Y5S2 1711 aa13.62□□□□□ -0.23
CSPG4P13-202ENST00000567704 SYNMO15061 1565 aa13.62□□□□□ -0.23
CSPG4P13-202ENST00000567704 CASQ2O14958 399 aaPredicted RBP13.62□□□□□ -0.23
CSPG4P13-202ENST00000567704 PPP1R21Q6ZMI0 780 aa13.62□□□□□ -0.23
CSPG4P13-202ENST00000567704 CAPN12Q6ZSI9 719 aa13.62□□□□□ -0.23
CSPG4P13-202ENST00000567704 BLIDQ8IZY5 108 aa13.62□□□□□ -0.23
CSPG4P13-202ENST00000567704 SPATA5Q8NB90 893 aa13.62□□□□□ -0.23
CSPG4P13-202ENST00000567704 SAP30BPQ9UHR5 308 aaKnown RBP13.62□□□□□ -0.23
CSPG4P13-202ENST00000567704 ARHGAP42A6NI28 874 aa13.62□□□□□ -0.23
CSPG4P13-202ENST00000567704 I3L4J1 428 aa13.62□□□□□ -0.23
CSPG4P13-202ENST00000567704 TPD52P55327 224 aaPredicted RBP13.62□□□□□ -0.23
CSPG4P13-202ENST00000567704 LRRC24Q50LG9 513 aa13.62□□□□□ -0.23
CSPG4P13-202ENST00000567704 NBPF5PQ86XG9 351 aaPredicted RBP13.62□□□□□ -0.23
CSPG4P13-202ENST00000567704 PSMD1Q99460 953 aa13.62□□□□□ -0.23
CSPG4P13-202ENST00000567704 IRX2Q9BZI1 471 aaPredicted RBP13.62□□□□□ -0.23
CSPG4P13-202ENST00000567704 VSNL1P62760 191 aa13.62□□□□□ -0.23
CSPG4P13-202ENST00000567704 HAUS3Q68CZ6 603 aa13.62□□□□□ -0.23
CSPG4P13-202ENST00000567704 SIRT1Q96EB6 747 aa13.62□□□□□ -0.23
CSPG4P13-202ENST00000567704 COPRSQ9NQ92 184 aa13.62□□□□□ -0.23
CSPG4P13-202ENST00000567704 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.62□□□□□ -0.23
CSPG4P13-202ENST00000567704 TNKSO95271 1327 aa13.62□□□□□ -0.23
CSPG4P13-202ENST00000567704 THAP12O43422 761 aa13.61□□□□□ -0.23
CSPG4P13-202ENST00000567704 PFDN1O60925 122 aa13.61□□□□□ -0.23
CSPG4P13-202ENST00000567704 XRCC5P13010 732 aaKnown RBP13.61□□□□□ -0.23
CSPG4P13-202ENST00000567704 PLTPP55058 493 aa13.61□□□□□ -0.23
CSPG4P13-202ENST00000567704 PPARAQ07869 468 aa13.61□□□□□ -0.23
CSPG4P13-202ENST00000567704 CFAP57Q96MR6 1250 aa13.61□□□□□ -0.23
CSPG4P13-202ENST00000567704 NLRP3Q96P20 1036 aa13.61□□□□□ -0.23
CSPG4P13-202ENST00000567704 FOXP1Q9H334 677 aaPredicted RBP13.61□□□□□ -0.23
CSPG4P13-202ENST00000567704 DIP2BQ9P265 1576 aa13.61□□□□□ -0.23
CSPG4P13-202ENST00000567704 CHMP2AO43633 222 aa13.61□□□□□ -0.23
CSPG4P13-202ENST00000567704 MAST3O60307 1309 aa13.61□□□□□ -0.23
CSPG4P13-202ENST00000567704 EIF4A3P38919 411 aaKnown RBP13.61□□□□□ -0.23
CSPG4P13-202ENST00000567704 SLCO1A2P46721 670 aa13.61□□□□□ -0.23
CSPG4P13-202ENST00000567704 COG7P83436 770 aa13.61□□□□□ -0.23
CSPG4P13-202ENST00000567704 KRT31Q15323 416 aa13.61□□□□□ -0.23
CSPG4P13-202ENST00000567704 ARHGEF25Q86VW2 580 aa13.61□□□□□ -0.23
CSPG4P13-202ENST00000567704 RETREG2Q8NC44 543 aa13.61□□□□□ -0.23
CSPG4P13-202ENST00000567704 TTC16Q8NEE8 873 aa13.61□□□□□ -0.23
CSPG4P13-202ENST00000567704 ADGRG1Q9Y653 693 aa13.61□□□□□ -0.23
CSPG4P13-202ENST00000567704 HMGB1P1B2RPK0 211 aaPredicted RBP13.61□□□□□ -0.23
CSPG4P13-202ENST00000567704 EXOC3O60645 756 aa13.61□□□□□ -0.23
CSPG4P13-202ENST00000567704 GCNT3O95395 438 aa13.61□□□□□ -0.23
CSPG4P13-202ENST00000567704 PDE6AP16499 860 aa13.61□□□□□ -0.23
CSPG4P13-202ENST00000567704 CDC25AP30304 524 aa13.61□□□□□ -0.23
CSPG4P13-202ENST00000567704 ADCY8P40145 1251 aa13.61□□□□□ -0.23
CSPG4P13-202ENST00000567704 ZBED6P86452 979 aa13.61□□□□□ -0.23
CSPG4P13-202ENST00000567704 LPIN2Q92539 896 aa13.61□□□□□ -0.23
CSPG4P13-202ENST00000567704 LDHBP07195 334 aaKnown RBP13.61□□□□□ -0.23
CSPG4P13-202ENST00000567704 EIF6P56537 245 aaKnown RBP13.61□□□□□ -0.23
CSPG4P13-202ENST00000567704 BIRC3Q13489 604 aa13.61□□□□□ -0.23
CSPG4P13-202ENST00000567704 IQCB1Q15051 598 aa13.61□□□□□ -0.23
CSPG4P13-202ENST00000567704 FBXW10Q5XX13 1052 aa13.61□□□□□ -0.23
CSPG4P13-202ENST00000567704 RDH13Q8NBN7 331 aa13.61□□□□□ -0.23
CSPG4P13-202ENST00000567704 FAM212AQ96EL1 285 aa13.61□□□□□ -0.23
CSPG4P13-202ENST00000567704 SAAL1Q96ER3 474 aa13.61□□□□□ -0.23
CSPG4P13-202ENST00000567704 ARMCX3Q9UH62 379 aaPredicted RBP13.61□□□□□ -0.23
CSPG4P13-202ENST00000567704 GNA14O95837 355 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms