RNA–Protein interactions for RNA: ENST00000567264.1

UBFD1-208, Transcript of ubiquitin family domain containing 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene UBFD1, Length 642 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-208ENST00000567264 ERVK-24P63145 666 aa26.31■■□□□ 1.8
UBFD1-208ENST00000567264 TMEM132BQ14DG7 1078 aa26.31■■□□□ 1.8
UBFD1-208ENST00000567264 PIBF1Q8WXW3 757 aa26.31■■□□□ 1.8
UBFD1-208ENST00000567264 PIGSQ96S52 555 aa26.31■■□□□ 1.8
UBFD1-208ENST00000567264 RAVER2Q9HCJ3 691 aaKnown RBP26.31■■□□□ 1.8
UBFD1-208ENST00000567264 SEC63Q9UGP8 760 aaKnown RBP26.31■■□□□ 1.8
UBFD1-208ENST00000567264 PNMA2Q9UL42 364 aa26.31■■□□□ 1.8
UBFD1-208ENST00000567264 CNTNAP5Q8WYK1 1306 aa26.31■■□□□ 1.8
UBFD1-208ENST00000567264 PEX10O60683 326 aa26.3■■□□□ 1.8
UBFD1-208ENST00000567264 IFNAR1P17181 557 aa26.3■■□□□ 1.8
UBFD1-208ENST00000567264 CCNA1P78396 465 aa26.3■■□□□ 1.8
UBFD1-208ENST00000567264 QRICH1Q2TAL8 776 aa26.3■■□□□ 1.8
UBFD1-208ENST00000567264 MTMR8Q96EF0 704 aa26.3■■□□□ 1.8
UBFD1-208ENST00000567264 TEX13BQ9BXU2 312 aa26.3■■□□□ 1.8
UBFD1-208ENST00000567264 SPATC1LQ9H0A9 340 aa26.3■■□□□ 1.8
UBFD1-208ENST00000567264 ZNF214Q9UL59 606 aaPredicted RBP26.3■■□□□ 1.8
UBFD1-208ENST00000567264 COL11A1P12107 1806 aaPredicted RBP26.3■■□□□ 1.8
UBFD1-208ENST00000567264 ATP2A1O14983 1001 aa26.29■■□□□ 1.8
UBFD1-208ENST00000567264 ZBTB5O15062 677 aa26.29■■□□□ 1.8
UBFD1-208ENST00000567264 STAT3P40763 770 aa26.29■■□□□ 1.8
UBFD1-208ENST00000567264 AKAP17AQ02040 695 aaKnown RBP26.29■■□□□ 1.8
UBFD1-208ENST00000567264 FUT2Q10981 343 aa26.29■■□□□ 1.8
UBFD1-208ENST00000567264 NTRK3Q16288 839 aa26.29■■□□□ 1.8
UBFD1-208ENST00000567264 CCDC83Q8IWF9 413 aa26.29■■□□□ 1.8
UBFD1-208ENST00000567264 SNX21Q969T3 373 aa26.29■■□□□ 1.8
UBFD1-208ENST00000567264 TMX3Q96JJ7 454 aa26.29■■□□□ 1.8
UBFD1-208ENST00000567264 CCPG1Q9ULG6 757 aa26.29■■□□□ 1.8
UBFD1-208ENST00000567264 PNMA6FA0A0J9YX94 578 aa26.28■■□□□ 1.8
UBFD1-208ENST00000567264 ICAM1P05362 532 aa26.28■■□□□ 1.8
UBFD1-208ENST00000567264 SLC4A3P48751 1232 aa26.28■■□□□ 1.8
UBFD1-208ENST00000567264 SNRNP48Q6IEG0 339 aaKnown RBP26.28■■□□□ 1.8
UBFD1-208ENST00000567264 HSCBQ8IWL3 235 aa26.28■■□□□ 1.8
UBFD1-208ENST00000567264 CCAR1Q8IX12 1150 aaKnown RBP26.28■■□□□ 1.8
UBFD1-208ENST00000567264 TRIM22Q8IYM9 498 aa26.28■■□□□ 1.8
UBFD1-208ENST00000567264 PHKBQ93100 1093 aa26.28■■□□□ 1.8
UBFD1-208ENST00000567264 SLC26A6Q9BXS9 759 aa26.28■■□□□ 1.8
UBFD1-208ENST00000567264 RBM27Q9P2N5 1060 aaKnown RBP26.28■■□□□ 1.8
UBFD1-208ENST00000567264 GPR25O00155 361 aa26.27■■□□□ 1.8
UBFD1-208ENST00000567264 COPB2P35606 906 aa26.27■■□□□ 1.8
UBFD1-208ENST00000567264 SSRP1Q08945 709 aaKnown RBP26.27■■□□□ 1.8
UBFD1-208ENST00000567264 TRAF1Q13077 416 aa26.27■■□□□ 1.8
UBFD1-208ENST00000567264 Q3C1V9 767 aa26.27■■□□□ 1.8
UBFD1-208ENST00000567264 FBXO11Q86XK2 927 aa26.27■■□□□ 1.8
UBFD1-208ENST00000567264 RIOX2Q8IUF8 465 aa26.27■■□□□ 1.8
UBFD1-208ENST00000567264 AGBL1Q96MI9 1066 aa26.27■■□□□ 1.8
UBFD1-208ENST00000567264 AMNQ9BXJ7 453 aa26.27■■□□□ 1.8
UBFD1-208ENST00000567264 MOV10L1Q9BXT6 1211 aaKnown RBP26.27■■□□□ 1.8
UBFD1-208ENST00000567264 RNF26Q9BY78 433 aaPredicted RBP26.27■■□□□ 1.8
UBFD1-208ENST00000567264 TSKSQ9UJT2 592 aa26.27■■□□□ 1.8
UBFD1-208ENST00000567264 V9GY48 417 aaPredicted RBP26.27■■□□□ 1.8
UBFD1-208ENST00000567264 ZNF536O15090 1300 aa26.27■■□□□ 1.8
UBFD1-208ENST00000567264 BAZ2BQ9UIF8 2168 aaKnown RBP26.26■■□□□ 1.79
UBFD1-208ENST00000567264 hCG_1642624A0A1W2PR95 340 aa26.26■■□□□ 1.79
UBFD1-208ENST00000567264 SLC25A27O95847 323 aa26.26■■□□□ 1.79
UBFD1-208ENST00000567264 SP3Q02447 781 aa26.26■■□□□ 1.79
UBFD1-208ENST00000567264 CWC22Q9HCG8 908 aaKnown RBP26.26■■□□□ 1.79
UBFD1-208ENST00000567264 K7ELQ4 463 aaPredicted RBP26.25■■□□□ 1.79
UBFD1-208ENST00000567264 PRPF3O43395 683 aaKnown RBP26.25■■□□□ 1.79
UBFD1-208ENST00000567264 ALAS1P13196 640 aa26.25■■□□□ 1.79
UBFD1-208ENST00000567264 ST3GAL1Q11201 340 aa26.25■■□□□ 1.79
UBFD1-208ENST00000567264 USH1GQ495M9 461 aa26.25■■□□□ 1.79
UBFD1-208ENST00000567264 NOM1Q5C9Z4 860 aaKnown RBP26.25■■□□□ 1.79
UBFD1-208ENST00000567264 NCAPG2Q86XI2 1143 aa26.25■■□□□ 1.79
UBFD1-208ENST00000567264 SHCBP1Q8NEM2 672 aa26.25■■□□□ 1.79
UBFD1-208ENST00000567264 PPFIA3O75145 1194 aa26.24■■□□□ 1.79
UBFD1-208ENST00000567264 FMNL1O95466 1100 aaPredicted RBP26.24■■□□□ 1.79
UBFD1-208ENST00000567264 HSPA1AP0DMV8 641 aaKnown RBP26.24■■□□□ 1.79
UBFD1-208ENST00000567264 HSPA1BP0DMV9 641 aaKnown RBP26.24■■□□□ 1.79
UBFD1-208ENST00000567264 TKFCQ3LXA3 575 aa26.24■■□□□ 1.79
UBFD1-208ENST00000567264 WDR78Q5VTH9 848 aa26.24■■□□□ 1.79
UBFD1-208ENST00000567264 LLPHQ9BRT6 129 aaKnown RBP26.24■■□□□ 1.79
UBFD1-208ENST00000567264 MYH6P13533 1939 aa26.24■■□□□ 1.79
UBFD1-208ENST00000567264 FKTNO75072 461 aa26.23■■□□□ 1.79
UBFD1-208ENST00000567264 CTDNEP1O95476 244 aa26.23■■□□□ 1.79
UBFD1-208ENST00000567264 MAPK4P31152 587 aa26.23■■□□□ 1.79
UBFD1-208ENST00000567264 KIF22Q14807 665 aa26.23■■□□□ 1.79
UBFD1-208ENST00000567264 NSUN7Q8NE18 718 aaKnown RBP26.23■■□□□ 1.79
UBFD1-208ENST00000567264 PORCNQ9H237 461 aa26.23■■□□□ 1.79
UBFD1-208ENST00000567264 MROH8Q9H579 483 aa26.23■■□□□ 1.79
UBFD1-208ENST00000567264 HOMER2Q9NSB8 354 aa26.23■■□□□ 1.79
UBFD1-208ENST00000567264 PCDHA1Q9Y5I3 950 aa26.23■■□□□ 1.79
UBFD1-208ENST00000567264 ABCB11O95342 1321 aa26.22■■□□□ 1.79
UBFD1-208ENST00000567264 STK36Q9NRP7 1315 aa26.22■■□□□ 1.79
UBFD1-208ENST00000567264 PTPDC1A2A3K4 754 aa26.22■■□□□ 1.79
UBFD1-208ENST00000567264 PPP1R11O60927 126 aaPredicted RBP26.22■■□□□ 1.79
UBFD1-208ENST00000567264 ERCC3P19447 782 aa26.22■■□□□ 1.79
UBFD1-208ENST00000567264 HEATR3Q7Z4Q2 680 aa26.22■■□□□ 1.79
UBFD1-208ENST00000567264 CHST13Q8NET6 341 aa26.22■■□□□ 1.79
UBFD1-208ENST00000567264 TRERF1Q96PN7 1200 aa26.22■■□□□ 1.79
UBFD1-208ENST00000567264 EFCC1Q9HA90 598 aa26.22■■□□□ 1.79
UBFD1-208ENST00000567264 RNF146Q9NTX7 359 aa26.22■■□□□ 1.79
UBFD1-208ENST00000567264 FBXO40Q9UH90 709 aa26.22■■□□□ 1.79
UBFD1-208ENST00000567264 RIPK3Q9Y572 518 aa26.22■■□□□ 1.79
UBFD1-208ENST00000567264 DEXIO95424 95 aa26.21■■□□□ 1.79
UBFD1-208ENST00000567264 TAL1P17542 331 aaPredicted RBP26.21■■□□□ 1.79
UBFD1-208ENST00000567264 LACTBP83111 547 aaPredicted RBP26.21■■□□□ 1.79
UBFD1-208ENST00000567264 PFKFB3Q16875 520 aaPredicted RBP26.21■■□□□ 1.79
UBFD1-208ENST00000567264 MRPL11Q9Y3B7 192 aaKnown RBP26.21■■□□□ 1.79
UBFD1-208ENST00000567264 hCG_1984214I3L0E3 225 aa26.2■■□□□ 1.78
UBFD1-208ENST00000567264 FOXN1O15353 648 aa26.2■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms