RNA–Protein interactions for RNA: ENST00000567003.1

PALB2-205, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-205ENST00000567003 PBX4Q9BYU1 374 aa18.53■□□□□ 0.56
PALB2-205ENST00000567003 HOMER2Q9NSB8 354 aa18.53■□□□□ 0.56
PALB2-205ENST00000567003 CTDP1Q9Y5B0 961 aaPredicted RBP18.53■□□□□ 0.56
PALB2-205ENST00000567003 IGKV6D-41A0A0C4DH26 115 aa18.52■□□□□ 0.56
PALB2-205ENST00000567003 CST5P28325 142 aaPredicted RBP18.52■□□□□ 0.56
PALB2-205ENST00000567003 BEX3Q00994 111 aa18.52■□□□□ 0.56
PALB2-205ENST00000567003 CCDC129Q6ZRS4 1044 aa18.52■□□□□ 0.56
PALB2-205ENST00000567003 ARMCX2Q7L311 632 aa18.52■□□□□ 0.56
PALB2-205ENST00000567003 MIER1Q8N108 512 aa18.52■□□□□ 0.56
PALB2-205ENST00000567003 UPF3AQ9H1J1 476 aaKnown RBP18.52■□□□□ 0.56
PALB2-205ENST00000567003 PRDM12Q9H4Q4 367 aa18.52■□□□□ 0.56
PALB2-205ENST00000567003 SLC38A10Q9HBR0 1119 aa18.52■□□□□ 0.56
PALB2-205ENST00000567003 DDX49Q9Y6V7 483 aaKnown RBP18.52■□□□□ 0.56
PALB2-205ENST00000567003 U3KPZ7 1027 aaPredicted RBP18.52■□□□□ 0.56
PALB2-205ENST00000567003 GBF1Q92538 1859 aa18.52■□□□□ 0.55
PALB2-205ENST00000567003 ELP1O95163 1332 aa18.51■□□□□ 0.55
PALB2-205ENST00000567003 A0A0U1RQG5 324 aaPredicted RBP18.51■□□□□ 0.55
PALB2-205ENST00000567003 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.51■□□□□ 0.55
PALB2-205ENST00000567003 ARVCFO00192 962 aa18.51■□□□□ 0.55
PALB2-205ENST00000567003 CTAGE5O15320 804 aa18.51■□□□□ 0.55
PALB2-205ENST00000567003 MS4A1P11836 297 aa18.51■□□□□ 0.55
PALB2-205ENST00000567003 GJA9P57773 515 aa18.51■□□□□ 0.55
PALB2-205ENST00000567003 CNTN2Q02246 1040 aa18.51■□□□□ 0.55
PALB2-205ENST00000567003 PPIGQ13427 754 aaKnown RBP eCLIP18.51■□□□□ 0.55
PALB2-205ENST00000567003 GNASQ5JWF2 1037 aa18.51■□□□□ 0.55
PALB2-205ENST00000567003 ZNF467Q7Z7K2 595 aaPredicted RBP18.51■□□□□ 0.55
PALB2-205ENST00000567003 CEP95Q96GE4 821 aa18.51■□□□□ 0.55
PALB2-205ENST00000567003 LRRCC1Q9C099 1032 aa18.51■□□□□ 0.55
PALB2-205ENST00000567003 KATNBL1Q9H079 304 aa18.51■□□□□ 0.55
PALB2-205ENST00000567003 REV3LO60673 3130 aa18.5■□□□□ 0.55
PALB2-205ENST00000567003 LRRC37A2A6NM11 1700 aa18.5■□□□□ 0.55
PALB2-205ENST00000567003 M0R2C6 588 aa18.5■□□□□ 0.55
PALB2-205ENST00000567003 ATP2A1O14983 1001 aa18.5■□□□□ 0.55
PALB2-205ENST00000567003 CYP2C18P33260 490 aa18.5■□□□□ 0.55
PALB2-205ENST00000567003 TJAP1Q5JTD0 557 aa18.5■□□□□ 0.55
PALB2-205ENST00000567003 RASIP1Q5U651 963 aa18.5■□□□□ 0.55
PALB2-205ENST00000567003 ZNF365Q70YC5 407 aa18.5■□□□□ 0.55
PALB2-205ENST00000567003 FAM126BQ8IXS8 530 aa18.5■□□□□ 0.55
PALB2-205ENST00000567003 CCDC144CPQ8IYA2 1237 aa18.5■□□□□ 0.55
PALB2-205ENST00000567003 PCSK9Q8NBP7 692 aaKnown RBP18.5■□□□□ 0.55
PALB2-205ENST00000567003 SYMPKQ92797 1274 aaKnown RBP18.5■□□□□ 0.55
PALB2-205ENST00000567003 ABHD16BQ9H3Z7 469 aa18.5■□□□□ 0.55
PALB2-205ENST00000567003 ISY1Q9ULR0 285 aaKnown RBP18.5■□□□□ 0.55
PALB2-205ENST00000567003 ASTN1O14525 1302 aa18.49■□□□□ 0.55
PALB2-205ENST00000567003 UMODL1Q5DID0 1318 aa18.49■□□□□ 0.55
PALB2-205ENST00000567003 MROH7Q68CQ1 1323 aa18.49■□□□□ 0.55
PALB2-205ENST00000567003 GPAA1O43292 621 aa18.49■□□□□ 0.55
PALB2-205ENST00000567003 TDO2P48775 406 aa18.49■□□□□ 0.55
PALB2-205ENST00000567003 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.49■□□□□ 0.55
PALB2-205ENST00000567003 SPC25Q9HBM1 224 aa18.49■□□□□ 0.55
PALB2-205ENST00000567003 MTMR4Q9NYA4 1195 aa18.49■□□□□ 0.55
PALB2-205ENST00000567003 CXXC1Q9P0U4 656 aaPredicted RBP18.49■□□□□ 0.55
PALB2-205ENST00000567003 C20orf194Q5TEA3 1177 aa18.48■□□□□ 0.55
PALB2-205ENST00000567003 SLFN13Q68D06 897 aa18.48■□□□□ 0.55
PALB2-205ENST00000567003 TMEM199Q8N511 208 aa18.48■□□□□ 0.55
PALB2-205ENST00000567003 KBTBD3Q8NAB2 608 aa18.48■□□□□ 0.55
PALB2-205ENST00000567003 CHST13Q8NET6 341 aa18.48■□□□□ 0.55
PALB2-205ENST00000567003 APPBP2Q92624 585 aa18.48■□□□□ 0.55
PALB2-205ENST00000567003 GAS2L1Q99501 681 aaPredicted RBP18.48■□□□□ 0.55
PALB2-205ENST00000567003 ECHDC1Q9NTX5 307 aa18.48■□□□□ 0.55
PALB2-205ENST00000567003 FEM1BQ9UK73 627 aa18.48■□□□□ 0.55
PALB2-205ENST00000567003 SOWAHBA6NEL2 793 aa18.47■□□□□ 0.55
PALB2-205ENST00000567003 RNF113AO15541 343 aaKnown RBP18.47■□□□□ 0.55
PALB2-205ENST00000567003 APPP05067 770 aa18.47■□□□□ 0.55
PALB2-205ENST00000567003 SNAP25P60880 206 aa18.47■□□□□ 0.55
PALB2-205ENST00000567003 ADGRE1Q14246 886 aa18.47■□□□□ 0.55
PALB2-205ENST00000567003 CCDC85BQ15834 202 aaPredicted RBP18.47■□□□□ 0.55
PALB2-205ENST00000567003 GIMAP6Q6P9H5 292 aa18.47■□□□□ 0.55
PALB2-205ENST00000567003 CXCL17Q6UXB2 119 aa18.47■□□□□ 0.55
PALB2-205ENST00000567003 NOL8Q76FK4 1167 aaKnown RBP18.47■□□□□ 0.55
PALB2-205ENST00000567003 RASGRP2Q7LDG7 609 aa18.47■□□□□ 0.55
PALB2-205ENST00000567003 ZNF444Q8N0Y2 327 aaPredicted RBP18.47■□□□□ 0.55
PALB2-205ENST00000567003 MKL1Q969V6 931 aa18.47■□□□□ 0.55
PALB2-205ENST00000567003 AGBL1Q96MI9 1066 aa18.47■□□□□ 0.55
PALB2-205ENST00000567003 NKX2-4Q9H2Z4 354 aa18.47■□□□□ 0.55
PALB2-205ENST00000567003 FBXO40Q9UH90 709 aa18.47■□□□□ 0.55
PALB2-205ENST00000567003 TMEM232C9JQI7 657 aa18.46■□□□□ 0.55
PALB2-205ENST00000567003 TLR3O15455 904 aaKnown RBP18.46■□□□□ 0.55
PALB2-205ENST00000567003 TTLL1O95922 423 aa18.46■□□□□ 0.55
PALB2-205ENST00000567003 CD4P01730 458 aa18.46■□□□□ 0.55
PALB2-205ENST00000567003 ATXN8OSP0DMR3 200 aa18.46■□□□□ 0.55
PALB2-205ENST00000567003 BMP3P12645 472 aa18.46■□□□□ 0.55
PALB2-205ENST00000567003 TNFAIP2Q03169 654 aa18.46■□□□□ 0.55
PALB2-205ENST00000567003 TMEM63BQ5T3F8 832 aa18.46■□□□□ 0.55
PALB2-205ENST00000567003 PSRC1Q6PGN9 363 aaPredicted RBP18.46■□□□□ 0.55
PALB2-205ENST00000567003 CCDC174Q6PII3 467 aa18.46■□□□□ 0.55
PALB2-205ENST00000567003 FAM133AQ8N9E0 248 aa18.46■□□□□ 0.55
PALB2-205ENST00000567003 GMCL1P1Q8NEA9 526 aa18.46■□□□□ 0.55
PALB2-205ENST00000567003 IL23AQ9NPF7 189 aa18.46■□□□□ 0.55
PALB2-205ENST00000567003 A1CFQ9NQ94 594 aaKnown RBP18.46■□□□□ 0.55
PALB2-205ENST00000567003 RNF146Q9NTX7 359 aa18.46■□□□□ 0.55
PALB2-205ENST00000567003 YBX2Q9Y2T7 364 aaKnown RBP18.46■□□□□ 0.55
PALB2-205ENST00000567003 LCTP09848 1927 aa18.46■□□□□ 0.55
PALB2-205ENST00000567003 NCOR1O75376 2440 aa18.45■□□□□ 0.54
PALB2-205ENST00000567003 TNFRSF10AO00220 468 aa18.45■□□□□ 0.54
PALB2-205ENST00000567003 CCL23P55773 120 aa18.45■□□□□ 0.54
PALB2-205ENST00000567003 SEC62Q99442 399 aaKnown RBP18.45■□□□□ 0.54
PALB2-205ENST00000567003 ACAD9Q9H845 621 aa18.45■□□□□ 0.54
PALB2-205ENST00000567003 RAPGEFL1Q9UHV5 662 aa18.45■□□□□ 0.54
PALB2-205ENST00000567003 XIRP2A4UGR9 3374 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms