RNA–Protein interactions for RNA: ENST00000566756.5

CMTM3-213, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-213ENST00000566756 CCDC178Q5BJE1 867 aa18.92■□□□□ 0.62
CMTM3-213ENST00000566756 KLHL10Q6JEL2 608 aa18.92■□□□□ 0.62
CMTM3-213ENST00000566756 ANKRD20A12PQ8NF67 263 aa18.92■□□□□ 0.62
CMTM3-213ENST00000566756 TTF2Q9UNY4 1162 aaKnown RBP18.92■□□□□ 0.62
CMTM3-213ENST00000566756 ZNF658Q5TYW1 1059 aaPredicted RBP18.92■□□□□ 0.62
CMTM3-213ENST00000566756 TMTC1Q8IUR5 882 aa18.92■□□□□ 0.62
CMTM3-213ENST00000566756 SH3RF3Q8TEJ3 882 aaPredicted RBP18.92■□□□□ 0.62
CMTM3-213ENST00000566756 GOLGA1Q92805 767 aa18.92■□□□□ 0.62
CMTM3-213ENST00000566756 MRPL44Q9H9J2 332 aaKnown RBP18.92■□□□□ 0.62
CMTM3-213ENST00000566756 SOWAHDA6NJG2 315 aa18.91■□□□□ 0.62
CMTM3-213ENST00000566756 KIF5CO60282 957 aa18.91■□□□□ 0.62
CMTM3-213ENST00000566756 MYL1P05976 194 aa18.91■□□□□ 0.62
CMTM3-213ENST00000566756 TXLNAP40222 546 aa18.91■□□□□ 0.62
CMTM3-213ENST00000566756 USP5P45974 858 aa18.91■□□□□ 0.62
CMTM3-213ENST00000566756 RAD9BQ6WBX8 426 aa18.91■□□□□ 0.62
CMTM3-213ENST00000566756 DGKHQ86XP1 1220 aa18.91■□□□□ 0.62
CMTM3-213ENST00000566756 MYO1AQ9UBC5 1043 aa18.91■□□□□ 0.62
CMTM3-213ENST00000566756 DDX60LQ5H9U9 1706 aaKnown RBP18.91■□□□□ 0.62
CMTM3-213ENST00000566756 hCG_1642624A0A1W2PR95 340 aa18.9■□□□□ 0.62
CMTM3-213ENST00000566756 BTDP43251 543 aa18.9■□□□□ 0.62
CMTM3-213ENST00000566756 STX17P56962 302 aa18.9■□□□□ 0.62
CMTM3-213ENST00000566756 FKBP1AP62942 108 aaKnown RBP18.9■□□□□ 0.62
CMTM3-213ENST00000566756 PAK1Q13153 545 aa18.9■□□□□ 0.62
CMTM3-213ENST00000566756 C12orf60Q5U649 245 aa18.9■□□□□ 0.62
CMTM3-213ENST00000566756 GALNT17Q6IS24 598 aa18.9■□□□□ 0.62
CMTM3-213ENST00000566756 CCDC12Q8WUD4 166 aaPredicted RBP18.9■□□□□ 0.62
CMTM3-213ENST00000566756 MCM9Q9NXL9 1143 aa18.9■□□□□ 0.62
CMTM3-213ENST00000566756 ZNF646O15015 1829 aaPredicted RBP18.9■□□□□ 0.62
CMTM3-213ENST00000566756 ROBO3Q96MS0 1386 aa18.9■□□□□ 0.62
CMTM3-213ENST00000566756 GYPCP04921 128 aa18.9■□□□□ 0.62
CMTM3-213ENST00000566756 PLA2G4AP47712 749 aa18.9■□□□□ 0.62
CMTM3-213ENST00000566756 GNAQP50148 359 aa18.9■□□□□ 0.62
CMTM3-213ENST00000566756 PIK3AP1Q6ZUJ8 805 aa18.9■□□□□ 0.62
CMTM3-213ENST00000566756 C4orf32Q8N8J7 132 aa18.9■□□□□ 0.62
CMTM3-213ENST00000566756 DESI2Q9BSY9 194 aa18.9■□□□□ 0.62
CMTM3-213ENST00000566756 UBXN6Q9BZV1 441 aa18.9■□□□□ 0.62
CMTM3-213ENST00000566756 CTNND2Q9UQB3 1225 aa18.9■□□□□ 0.62
CMTM3-213ENST00000566756 MYH1P12882 1939 aa18.89■□□□□ 0.61
CMTM3-213ENST00000566756 G3V3G9 751 aa18.89■□□□□ 0.61
CMTM3-213ENST00000566756 POTEB2H3BUK9 544 aa18.89■□□□□ 0.61
CMTM3-213ENST00000566756 MTF1Q14872 753 aa18.89■□□□□ 0.61
CMTM3-213ENST00000566756 KRT31Q15323 416 aa18.89■□□□□ 0.61
CMTM3-213ENST00000566756 DCAF8Q5TAQ9 597 aa18.89■□□□□ 0.61
CMTM3-213ENST00000566756 RRAGBQ5VZM2 374 aa18.89■□□□□ 0.61
CMTM3-213ENST00000566756 RCSD1Q6JBY9 416 aa18.89■□□□□ 0.61
CMTM3-213ENST00000566756 BLIDQ8IZY5 108 aa18.89■□□□□ 0.61
CMTM3-213ENST00000566756 CEP112Q8N8E3 955 aa18.89■□□□□ 0.61
CMTM3-213ENST00000566756 DAGLBQ8NCG7 672 aa18.89■□□□□ 0.61
CMTM3-213ENST00000566756 SUPT20HQ8NEM7 779 aa18.89■□□□□ 0.61
CMTM3-213ENST00000566756 CASP14P31944 242 aa18.88■□□□□ 0.61
CMTM3-213ENST00000566756 RHBDL3P58872 404 aa18.88■□□□□ 0.61
CMTM3-213ENST00000566756 IL17AQ16552 155 aa18.88■□□□□ 0.61
CMTM3-213ENST00000566756 DOK7Q18PE1 504 aa18.88■□□□□ 0.61
CMTM3-213ENST00000566756 NOM1Q5C9Z4 860 aaKnown RBP18.88■□□□□ 0.61
CMTM3-213ENST00000566756 CC2D1AQ6P1N0 951 aaPredicted RBP18.88■□□□□ 0.61
CMTM3-213ENST00000566756 SRGAP1Q7Z6B7 1085 aa18.88■□□□□ 0.61
CMTM3-213ENST00000566756 AMOTL1Q8IY63 956 aa18.88■□□□□ 0.61
CMTM3-213ENST00000566756 CDC23Q9UJX2 597 aa18.88■□□□□ 0.61
CMTM3-213ENST00000566756 PCDHA4Q9UN74 947 aa18.88■□□□□ 0.61
CMTM3-213ENST00000566756 TSPY2A6NKD2 308 aa18.88■□□□□ 0.61
CMTM3-213ENST00000566756 H7C1D1 291 aa18.88■□□□□ 0.61
CMTM3-213ENST00000566756 CASP1P29466 404 aa18.88■□□□□ 0.61
CMTM3-213ENST00000566756 COPB1P53618 953 aaKnown RBP18.88■□□□□ 0.61
CMTM3-213ENST00000566756 KCNB1Q14721 858 aa18.88■□□□□ 0.61
CMTM3-213ENST00000566756 KARSQ15046 597 aaKnown RBP18.88■□□□□ 0.61
CMTM3-213ENST00000566756 BRD3Q15059 726 aa18.88■□□□□ 0.61
CMTM3-213ENST00000566756 SMYD4Q8IYR2 804 aaPredicted RBP18.88■□□□□ 0.61
CMTM3-213ENST00000566756 CERS5Q8N5B7 392 aa18.88■□□□□ 0.61
CMTM3-213ENST00000566756 MTRQ99707 1265 aa18.88■□□□□ 0.61
CMTM3-213ENST00000566756 SCN9AQ15858 1988 aa18.88■□□□□ 0.61
CMTM3-213ENST00000566756 CCDC151A5D8V7 595 aa18.87■□□□□ 0.61
CMTM3-213ENST00000566756 LAD1O00515 517 aa18.87■□□□□ 0.61
CMTM3-213ENST00000566756 N4BP3O15049 544 aa18.87■□□□□ 0.61
CMTM3-213ENST00000566756 RPN1P04843 607 aaKnown RBP18.87■□□□□ 0.61
CMTM3-213ENST00000566756 USP17L8P0C7I0 530 aa18.87■□□□□ 0.61
CMTM3-213ENST00000566756 MCM7P33993 719 aa18.87■□□□□ 0.61
CMTM3-213ENST00000566756 TCP11X2Q5H9J9 407 aa18.87■□□□□ 0.61
CMTM3-213ENST00000566756 CYP26C1Q6V0L0 522 aa18.87■□□□□ 0.61
CMTM3-213ENST00000566756 TGFBRAP1Q8WUH2 860 aa18.87■□□□□ 0.61
CMTM3-213ENST00000566756 MRIQ9BWK5 157 aa18.87■□□□□ 0.61
CMTM3-213ENST00000566756 KAT14Q9H8E8 782 aa18.87■□□□□ 0.61
CMTM3-213ENST00000566756 ARFGAP3Q9NP61 516 aa18.87■□□□□ 0.61
CMTM3-213ENST00000566756 TCP11L1Q9NUJ3 509 aa18.87■□□□□ 0.61
CMTM3-213ENST00000566756 PSME4Q14997 1843 aa18.87■□□□□ 0.61
CMTM3-213ENST00000566756 M0R2N6 131 aa18.86■□□□□ 0.61
CMTM3-213ENST00000566756 FXR1P51114 621 aaKnown RBP eCLIP18.86■□□□□ 0.61
CMTM3-213ENST00000566756 STRIP1Q5VSL9 837 aa18.86■□□□□ 0.61
CMTM3-213ENST00000566756 TTLL6Q8N841 843 aa18.86■□□□□ 0.61
CMTM3-213ENST00000566756 CCDC148Q8NFR7 591 aa18.86■□□□□ 0.61
CMTM3-213ENST00000566756 NELFBQ8WX92 580 aa18.86■□□□□ 0.61
CMTM3-213ENST00000566756 ABHD10Q9NUJ1 306 aa18.86■□□□□ 0.61
CMTM3-213ENST00000566756 DAGLAQ9Y4D2 1042 aa18.86■□□□□ 0.61
CMTM3-213ENST00000566756 CYP2D6P10635 497 aa18.86■□□□□ 0.61
CMTM3-213ENST00000566756 GRM4Q14833 912 aa18.86■□□□□ 0.61
CMTM3-213ENST00000566756 FAM47AQ5JRC9 791 aa18.86■□□□□ 0.61
CMTM3-213ENST00000566756 TEX35Q5T0J7 233 aa18.86■□□□□ 0.61
CMTM3-213ENST00000566756 HHIPL2Q6UWX4 724 aa18.86■□□□□ 0.61
CMTM3-213ENST00000566756 TEX11Q8IYF3 940 aa18.86■□□□□ 0.61
CMTM3-213ENST00000566756 HNRNPLLQ8WVV9 542 aaKnown RBP18.86■□□□□ 0.61
CMTM3-213ENST00000566756 MAGEF1Q9HAY2 307 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms