RNA–Protein interactions for RNA: ENST00000566723.1

SMPD3-208, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 4

Gene SMPD3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-208ENST00000566723 ZNF589Q86UQ0 364 aaPredicted RBP17.98■□□□□ 0.47
SMPD3-208ENST00000566723 FGD4Q96M96 766 aa17.98■□□□□ 0.47
SMPD3-208ENST00000566723 RWDD1Q9H446 243 aaPredicted RBP17.98■□□□□ 0.47
SMPD3-208ENST00000566723 HOMER2Q9NSB8 354 aa17.98■□□□□ 0.47
SMPD3-208ENST00000566723 ZHX1Q9UKY1 873 aaPredicted RBP17.98■□□□□ 0.47
SMPD3-208ENST00000566723 ZNF536O15090 1300 aa17.98■□□□□ 0.47
SMPD3-208ENST00000566723 CCDC171Q6TFL3 1326 aa17.98■□□□□ 0.47
SMPD3-208ENST00000566723 TRIM6-TRIM34B2RNG4 842 aa17.97■□□□□ 0.47
SMPD3-208ENST00000566723 ADAMTS4O75173 837 aa17.97■□□□□ 0.47
SMPD3-208ENST00000566723 FGAP02671 866 aa17.97■□□□□ 0.47
SMPD3-208ENST00000566723 HSPD1P10809 573 aaKnown RBP17.97■□□□□ 0.47
SMPD3-208ENST00000566723 RCSD1Q6JBY9 416 aa17.97■□□□□ 0.47
SMPD3-208ENST00000566723 KCTD1Q719H9 257 aa17.97■□□□□ 0.47
SMPD3-208ENST00000566723 RASGRP2Q7LDG7 609 aa17.97■□□□□ 0.47
SMPD3-208ENST00000566723 CHMP4CQ96CF2 233 aa17.97■□□□□ 0.47
SMPD3-208ENST00000566723 ACAD9Q9H845 621 aa17.97■□□□□ 0.47
SMPD3-208ENST00000566723 PDLIM7Q9NR12 457 aa17.97■□□□□ 0.47
SMPD3-208ENST00000566723 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.97■□□□□ 0.47
SMPD3-208ENST00000566723 FAM184BQ9ULE4 1060 aa17.97■□□□□ 0.47
SMPD3-208ENST00000566723 SYNRGQ9UMZ2 1314 aa17.97■□□□□ 0.47
SMPD3-208ENST00000566723 A0A1W2PQ45 241 aaPredicted RBP17.96■□□□□ 0.47
SMPD3-208ENST00000566723 A0A1W2PQY0 241 aa17.96■□□□□ 0.47
SMPD3-208ENST00000566723 TKFCQ3LXA3 575 aa17.96■□□□□ 0.47
SMPD3-208ENST00000566723 B4GALNT3Q6L9W6 998 aa17.96■□□□□ 0.47
SMPD3-208ENST00000566723 RILPL2Q969X0 211 aa17.96■□□□□ 0.47
SMPD3-208ENST00000566723 PRDM5Q9NQX1 630 aaPredicted RBP17.96■□□□□ 0.47
SMPD3-208ENST00000566723 TOMM22Q9NS69 142 aa17.96■□□□□ 0.47
SMPD3-208ENST00000566723 RNF146Q9NTX7 359 aa17.96■□□□□ 0.47
SMPD3-208ENST00000566723 ACVR2BQ13705 512 aa17.95■□□□□ 0.46
SMPD3-208ENST00000566723 RRP12Q5JTH9 1297 aaKnown RBP17.95■□□□□ 0.46
SMPD3-208ENST00000566723 ARMCX2Q7L311 632 aa17.95■□□□□ 0.46
SMPD3-208ENST00000566723 CHD1LQ86WJ1 897 aa17.95■□□□□ 0.46
SMPD3-208ENST00000566723 DCAF4Q8WV16 495 aa17.95■□□□□ 0.46
SMPD3-208ENST00000566723 AGBL1Q96MI9 1066 aa17.95■□□□□ 0.46
SMPD3-208ENST00000566723 TSEN34Q9BSV6 310 aaKnown RBP17.95■□□□□ 0.46
SMPD3-208ENST00000566723 ABHD16BQ9H3Z7 469 aa17.95■□□□□ 0.46
SMPD3-208ENST00000566723 A1CFQ9NQ94 594 aaKnown RBP17.95■□□□□ 0.46
SMPD3-208ENST00000566723 PRR12Q9ULL5 1215 aa17.95■□□□□ 0.46
SMPD3-208ENST00000566723 MTMR7Q9Y216 660 aa17.95■□□□□ 0.46
SMPD3-208ENST00000566723 POTEB2H3BUK9 544 aa17.94■□□□□ 0.46
SMPD3-208ENST00000566723 DUSP11O75319 330 aaKnown RBP17.94■□□□□ 0.46
SMPD3-208ENST00000566723 MFAP1P55081 439 aaKnown RBP17.94■□□□□ 0.46
SMPD3-208ENST00000566723 NUCB1Q02818 461 aa17.94■□□□□ 0.46
SMPD3-208ENST00000566723 CCDC96Q2M329 555 aa17.94■□□□□ 0.46
SMPD3-208ENST00000566723 CCDC174Q6PII3 467 aa17.94■□□□□ 0.46
SMPD3-208ENST00000566723 PLEKHM2Q8IWE5 1019 aa17.94■□□□□ 0.46
SMPD3-208ENST00000566723 FAM133AQ8N9E0 248 aa17.94■□□□□ 0.46
SMPD3-208ENST00000566723 OSBPL3Q9H4L5 887 aa17.94■□□□□ 0.46
SMPD3-208ENST00000566723 IGHDP01880 384 aa17.93■□□□□ 0.46
SMPD3-208ENST00000566723 TOP1P11387 765 aaKnown RBP17.93■□□□□ 0.46
SMPD3-208ENST00000566723 PCP11498 1178 aaKnown RBP17.93■□□□□ 0.46
SMPD3-208ENST00000566723 ALAS1P13196 640 aa17.93■□□□□ 0.46
SMPD3-208ENST00000566723 CST5P28325 142 aaPredicted RBP17.93■□□□□ 0.46
SMPD3-208ENST00000566723 HAND2P61296 217 aa17.93■□□□□ 0.46
SMPD3-208ENST00000566723 CNTN2Q02246 1040 aa17.93■□□□□ 0.46
SMPD3-208ENST00000566723 TLE2Q04725 743 aa17.93■□□□□ 0.46
SMPD3-208ENST00000566723 CCDC144CPQ8IYA2 1237 aa17.93■□□□□ 0.46
SMPD3-208ENST00000566723 DEFB123Q8N688 67 aa17.93■□□□□ 0.46
SMPD3-208ENST00000566723 KLHDC9Q8NEP7 349 aa17.93■□□□□ 0.46
SMPD3-208ENST00000566723 EXOC6Q8TAG9 804 aa17.93■□□□□ 0.46
SMPD3-208ENST00000566723 TRERF1Q96PN7 1200 aa17.93■□□□□ 0.46
SMPD3-208ENST00000566723 TCP11L1Q9NUJ3 509 aa17.93■□□□□ 0.46
SMPD3-208ENST00000566723 MYH6P13533 1939 aa17.92■□□□□ 0.46
SMPD3-208ENST00000566723 MOXD2PA6NHM9 499 aa17.92■□□□□ 0.46
SMPD3-208ENST00000566723 ADCY6O43306 1168 aa17.92■□□□□ 0.46
SMPD3-208ENST00000566723 SDSP20132 328 aa17.92■□□□□ 0.46
SMPD3-208ENST00000566723 ACLYP53396 1101 aa17.92■□□□□ 0.46
SMPD3-208ENST00000566723 SNAP25P60880 206 aa17.92■□□□□ 0.46
SMPD3-208ENST00000566723 CCDC144BQ3MJ40 725 aa17.92■□□□□ 0.46
SMPD3-208ENST00000566723 SH3RF1Q7Z6J0 888 aa17.92■□□□□ 0.46
SMPD3-208ENST00000566723 NUP133Q8WUM0 1156 aa17.92■□□□□ 0.46
SMPD3-208ENST00000566723 TMEM47Q9BQJ4 181 aa17.92■□□□□ 0.46
SMPD3-208ENST00000566723 KATNBL1Q9H079 304 aa17.92■□□□□ 0.46
SMPD3-208ENST00000566723 RANBP17Q9H2T7 1088 aaKnown RBP17.92■□□□□ 0.46
SMPD3-208ENST00000566723 STARD7Q9NQZ5 370 aa17.92■□□□□ 0.46
SMPD3-208ENST00000566723 CCPG1Q9ULG6 757 aa17.92■□□□□ 0.46
SMPD3-208ENST00000566723 TRIM43BA6NCK2 446 aa17.91■□□□□ 0.46
SMPD3-208ENST00000566723 MYADML2A6NDP7 307 aa17.91■□□□□ 0.46
SMPD3-208ENST00000566723 CLTBP09497 229 aa17.91■□□□□ 0.46
SMPD3-208ENST00000566723 C6orf222P0C671 652 aaPredicted RBP17.91■□□□□ 0.46
SMPD3-208ENST00000566723 AKNAD1Q5T1N1 836 aa17.91■□□□□ 0.46
SMPD3-208ENST00000566723 CCSAPQ6IQ19 270 aaPredicted RBP17.91■□□□□ 0.46
SMPD3-208ENST00000566723 BTNL9Q6UXG8 535 aa17.91■□□□□ 0.46
SMPD3-208ENST00000566723 Q7L0L9 218 aa17.91■□□□□ 0.46
SMPD3-208ENST00000566723 TBC1D10CQ8IV04 446 aa17.91■□□□□ 0.46
SMPD3-208ENST00000566723 BADQ92934 168 aa17.91■□□□□ 0.46
SMPD3-208ENST00000566723 TRIM43Q96BQ3 446 aaPredicted RBP17.91■□□□□ 0.46
SMPD3-208ENST00000566723 UPF3AQ9H1J1 476 aaKnown RBP17.91■□□□□ 0.46
SMPD3-208ENST00000566723 RNF41Q9H4P4 317 aaPredicted RBP17.91■□□□□ 0.46
SMPD3-208ENST00000566723 SPC25Q9HBM1 224 aa17.91■□□□□ 0.46
SMPD3-208ENST00000566723 SOWAHBA6NEL2 793 aa17.9■□□□□ 0.46
SMPD3-208ENST00000566723 ASB14A6NK59 587 aa17.9■□□□□ 0.46
SMPD3-208ENST00000566723 PQBP1O60828 265 aaKnown RBP17.9■□□□□ 0.46
SMPD3-208ENST00000566723 ICAM1P05362 532 aa17.9■□□□□ 0.46
SMPD3-208ENST00000566723 KCNA10Q16322 511 aa17.9■□□□□ 0.46
SMPD3-208ENST00000566723 MUM1L1Q5H9M0 696 aa17.9■□□□□ 0.46
SMPD3-208ENST00000566723 SYDE2Q5VT97 1194 aa17.9■□□□□ 0.46
SMPD3-208ENST00000566723 TTBK2Q6IQ55 1244 aa17.9■□□□□ 0.46
SMPD3-208ENST00000566723 MFSD6Q6ZSS7 791 aa17.9■□□□□ 0.46
SMPD3-208ENST00000566723 DIAPH3Q9NSV4 1193 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms