RNA–Protein interactions for RNA: ENST00000566240.1

CNOT1-209, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-209ENST00000566240 KCNF1Q9H3M0 494 aa6.95□□□□□ -1.3
CNOT1-209ENST00000566240 PRDM5Q9NQX1 630 aaPredicted RBP6.95□□□□□ -1.3
CNOT1-209ENST00000566240 MCM8Q9UJA3 840 aa6.95□□□□□ -1.3
CNOT1-209ENST00000566240 KCNH3Q9ULD8 1083 aa6.95□□□□□ -1.3
CNOT1-209ENST00000566240 GPR55Q9Y2T6 319 aaPredicted RBP6.95□□□□□ -1.3
CNOT1-209ENST00000566240 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.94□□□□□ -1.3
CNOT1-209ENST00000566240 SIGLEC6O43699 453 aa6.94□□□□□ -1.3
CNOT1-209ENST00000566240 PARNO95453 639 aaKnown RBP6.94□□□□□ -1.3
CNOT1-209ENST00000566240 CPP00450 1065 aa6.94□□□□□ -1.3
CNOT1-209ENST00000566240 SCG5P05408 212 aa6.94□□□□□ -1.3
CNOT1-209ENST00000566240 ITIH2P19823 946 aa6.94□□□□□ -1.3
CNOT1-209ENST00000566240 ECI1P42126 302 aa6.94□□□□□ -1.3
CNOT1-209ENST00000566240 NTRK3Q16288 839 aa6.94□□□□□ -1.3
CNOT1-209ENST00000566240 SFRP5Q5T4F7 317 aa6.94□□□□□ -1.3
CNOT1-209ENST00000566240 NOL8Q76FK4 1167 aaKnown RBP6.94□□□□□ -1.3
CNOT1-209ENST00000566240 DDX46Q7L014 1031 aaKnown RBP6.94□□□□□ -1.3
CNOT1-209ENST00000566240 FGD2Q7Z6J4 655 aa6.94□□□□□ -1.3
CNOT1-209ENST00000566240 AHI1Q8N157 1196 aa6.94□□□□□ -1.3
CNOT1-209ENST00000566240 PPM1KQ8N3J5 372 aa6.94□□□□□ -1.3
CNOT1-209ENST00000566240 DTWD2Q8NBA8 298 aa6.94□□□□□ -1.3
CNOT1-209ENST00000566240 MEGF10Q96KG7 1140 aa6.94□□□□□ -1.3
CNOT1-209ENST00000566240 ASCC2Q9H1I8 757 aaPredicted RBP6.94□□□□□ -1.3
CNOT1-209ENST00000566240 CHST7Q9NS84 486 aa6.94□□□□□ -1.3
CNOT1-209ENST00000566240 FAM83GA6ND36 823 aa6.93□□□□□ -1.3
CNOT1-209ENST00000566240 H0Y8X5 98 aa6.93□□□□□ -1.3
CNOT1-209ENST00000566240 PRAMEF1O95521 474 aa6.93□□□□□ -1.3
CNOT1-209ENST00000566240 CBX7O95931 251 aa6.93□□□□□ -1.3
CNOT1-209ENST00000566240 ASLP04424 464 aa6.93□□□□□ -1.3
CNOT1-209ENST00000566240 FAM87AP0C7U9 286 aa6.93□□□□□ -1.3
CNOT1-209ENST00000566240 POU3F2P20265 443 aaPredicted RBP6.93□□□□□ -1.3
CNOT1-209ENST00000566240 KIR3DL1P43629 444 aa6.93□□□□□ -1.3
CNOT1-209ENST00000566240 NMIQ13287 307 aaPredicted RBP6.93□□□□□ -1.3
CNOT1-209ENST00000566240 DOC2BQ14184 412 aa6.93□□□□□ -1.3
CNOT1-209ENST00000566240 DPY19L1Q2PZI1 675 aa6.93□□□□□ -1.3
CNOT1-209ENST00000566240 SLC35F1Q5T1Q4 408 aa6.93□□□□□ -1.3
CNOT1-209ENST00000566240 BEND4Q6ZU67 534 aa6.93□□□□□ -1.3
CNOT1-209ENST00000566240 FAM214BQ7L5A3 538 aa6.93□□□□□ -1.3
CNOT1-209ENST00000566240 MAMDC2Q7Z304 686 aaPredicted RBP6.93□□□□□ -1.3
CNOT1-209ENST00000566240 AFAP1L2Q8N4X5 818 aa6.93□□□□□ -1.3
CNOT1-209ENST00000566240 LEO1Q8WVC0 666 aaPredicted RBP6.93□□□□□ -1.3
CNOT1-209ENST00000566240 C1orf159Q96HA4 380 aa6.93□□□□□ -1.3
CNOT1-209ENST00000566240 SCLYQ96I15 445 aa6.93□□□□□ -1.3
CNOT1-209ENST00000566240 MAGEB10Q96LZ2 347 aaPredicted RBP6.93□□□□□ -1.3
CNOT1-209ENST00000566240 CEP89Q96ST8 783 aa6.93□□□□□ -1.3
CNOT1-209ENST00000566240 G3BP2Q9UN86 482 aaKnown RBP6.93□□□□□ -1.3
CNOT1-209ENST00000566240 MINPP1Q9UNW1 487 aa6.93□□□□□ -1.3
CNOT1-209ENST00000566240 TNPO3Q9Y5L0 923 aaKnown RBP6.93□□□□□ -1.3
CNOT1-209ENST00000566240 ALG1L2C9J202 215 aa6.92□□□□□ -1.3
CNOT1-209ENST00000566240 MEIS1O00470 390 aa6.92□□□□□ -1.3
CNOT1-209ENST00000566240 OPA1O60313 960 aa6.92□□□□□ -1.3
CNOT1-209ENST00000566240 PMLP29590 882 aa6.92□□□□□ -1.3
CNOT1-209ENST00000566240 NEK4P51957 841 aa6.92□□□□□ -1.3
CNOT1-209ENST00000566240 EXOSC10Q01780 885 aaKnown RBP6.92□□□□□ -1.3
CNOT1-209ENST00000566240 POU4F1Q01851 419 aa6.92□□□□□ -1.3
CNOT1-209ENST00000566240 CYP4F3Q08477 520 aa6.92□□□□□ -1.3
CNOT1-209ENST00000566240 PRSS53Q2L4Q9 553 aa6.92□□□□□ -1.3
CNOT1-209ENST00000566240 WWC2Q6AWC2 1192 aa6.92□□□□□ -1.3
CNOT1-209ENST00000566240 USP53Q70EK8 1073 aa6.92□□□□□ -1.3
CNOT1-209ENST00000566240 STRA8Q7Z7C7 330 aa6.92□□□□□ -1.3
CNOT1-209ENST00000566240 ATL2Q8NHH9 583 aa6.92□□□□□ -1.3
CNOT1-209ENST00000566240 SEMA6BQ9H3T3 888 aa6.92□□□□□ -1.3
CNOT1-209ENST00000566240 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.91□□□□□ -1.3
CNOT1-209ENST00000566240 DHX15O43143 795 aaKnown RBP6.91□□□□□ -1.3
CNOT1-209ENST00000566240 NPTXRO95502 500 aa6.91□□□□□ -1.3
CNOT1-209ENST00000566240 GSNP06396 782 aa6.91□□□□□ -1.3
CNOT1-209ENST00000566240 CPEP16870 476 aa6.91□□□□□ -1.3
CNOT1-209ENST00000566240 SCRN1Q12765 414 aa6.91□□□□□ -1.3
CNOT1-209ENST00000566240 ZNF460Q14592 562 aa6.91□□□□□ -1.3
CNOT1-209ENST00000566240 PCBP1Q15365 356 aaKnown RBP eCLIP6.91□□□□□ -1.3
CNOT1-209ENST00000566240 BRDTQ58F21 947 aaPredicted RBP6.91□□□□□ -1.3
CNOT1-209ENST00000566240 CWF19L1Q69YN2 538 aaKnown RBP6.91□□□□□ -1.3
CNOT1-209ENST00000566240 DENND5AQ6IQ26 1287 aa6.91□□□□□ -1.3
CNOT1-209ENST00000566240 TXNRD3Q86VQ6 643 aa6.91□□□□□ -1.3
CNOT1-209ENST00000566240 CLEC10AQ8IUN9 316 aa6.91□□□□□ -1.3
CNOT1-209ENST00000566240 KREMEN2Q8NCW0 462 aa6.91□□□□□ -1.3
CNOT1-209ENST00000566240 ENOX1Q8TC92 643 aaKnown RBP6.91□□□□□ -1.3
CNOT1-209ENST00000566240 DCAF4Q8WV16 495 aa6.91□□□□□ -1.3
CNOT1-209ENST00000566240 HEXIM2Q96MH2 286 aaKnown RBP6.91□□□□□ -1.3
CNOT1-209ENST00000566240 CHPF2Q9P2E5 772 aa6.91□□□□□ -1.3
CNOT1-209ENST00000566240 GTF2IRD1Q9UHL9 959 aa6.91□□□□□ -1.3
CNOT1-209ENST00000566240 TRAF6Q9Y4K3 522 aa6.91□□□□□ -1.3
CNOT1-209ENST00000566240 TCRBV16S1A1N1A0A5B0 115 aa6.9□□□□□ -1.3
CNOT1-209ENST00000566240 SHISA3A0PJX4 238 aa6.9□□□□□ -1.3
CNOT1-209ENST00000566240 PRR33A8MZF0 331 aa6.9□□□□□ -1.3
CNOT1-209ENST00000566240 EYA4O95677 639 aa6.9□□□□□ -1.3
CNOT1-209ENST00000566240 IGFALSP35858 605 aa6.9□□□□□ -1.3
CNOT1-209ENST00000566240 FLT3P36888 993 aa6.9□□□□□ -1.3
CNOT1-209ENST00000566240 CTSKP43235 329 aa6.9□□□□□ -1.3
CNOT1-209ENST00000566240 FAM50AQ14320 339 aaKnown RBP6.9□□□□□ -1.3
CNOT1-209ENST00000566240 ODR4Q5SWX8 454 aa6.9□□□□□ -1.3
CNOT1-209ENST00000566240 STYK1Q6J9G0 422 aa6.9□□□□□ -1.3
CNOT1-209ENST00000566240 OGFOD3Q6PK18 319 aa6.9□□□□□ -1.3
CNOT1-209ENST00000566240 C22orf34Q6ZV56 151 aa6.9□□□□□ -1.3
CNOT1-209ENST00000566240 JDP2Q8WYK2 163 aa6.9□□□□□ -1.3
CNOT1-209ENST00000566240 COPS5Q92905 334 aa6.9□□□□□ -1.3
CNOT1-209ENST00000566240 FAM83CQ9BQN1 747 aa6.9□□□□□ -1.3
CNOT1-209ENST00000566240 MCMBPQ9BTE3 642 aa6.9□□□□□ -1.3
CNOT1-209ENST00000566240 KRTAP9-2Q9BYQ4 174 aa6.9□□□□□ -1.3
CNOT1-209ENST00000566240 MTFR1LQ9H019 292 aa6.9□□□□□ -1.3
CNOT1-209ENST00000566240 RNF112Q9ULX5 631 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms