RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 GRIN2DO15399 1336 aa10.96□□□□□ -0.65
VPS9D1-205ENST00000565452 ADCY6O43306 1168 aa10.96□□□□□ -0.65
VPS9D1-205ENST00000565452 IDH1O75874 414 aaKnown RBP10.96□□□□□ -0.65
VPS9D1-205ENST00000565452 GABPAQ06546 454 aa10.96□□□□□ -0.65
VPS9D1-205ENST00000565452 FSCN1Q16658 493 aaKnown RBP10.96□□□□□ -0.65
VPS9D1-205ENST00000565452 SIAH1Q8IUQ4 282 aa10.96□□□□□ -0.65
VPS9D1-205ENST00000565452 ANKRD35Q8N283 1001 aa10.96□□□□□ -0.65
VPS9D1-205ENST00000565452 ZNF512BQ96KM6 892 aaPredicted RBP10.96□□□□□ -0.65
VPS9D1-205ENST00000565452 TEX13BQ9BXU2 312 aa10.96□□□□□ -0.65
VPS9D1-205ENST00000565452 IRF2BPLQ9H1B7 796 aa10.96□□□□□ -0.65
VPS9D1-205ENST00000565452 FBXO28Q9NVF7 368 aa10.96□□□□□ -0.65
VPS9D1-205ENST00000565452 SWAP70Q9UH65 585 aa10.96□□□□□ -0.65
VPS9D1-205ENST00000565452 PPP1R9AQ9ULJ8 1098 aa10.96□□□□□ -0.65
VPS9D1-205ENST00000565452 CTDP1Q9Y5B0 961 aaPredicted RBP10.96□□□□□ -0.65
VPS9D1-205ENST00000565452 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.96□□□□□ -0.65
VPS9D1-205ENST00000565452 DYNC1LI2O43237 492 aaPredicted RBP10.95□□□□□ -0.66
VPS9D1-205ENST00000565452 GFRA3O60609 400 aa10.95□□□□□ -0.66
VPS9D1-205ENST00000565452 ARHGEF15O94989 841 aa10.95□□□□□ -0.66
VPS9D1-205ENST00000565452 ZAP70P43403 619 aa10.95□□□□□ -0.66
VPS9D1-205ENST00000565452 KCNJ6P48051 423 aa10.95□□□□□ -0.66
VPS9D1-205ENST00000565452 SLC4A3P48751 1232 aa10.95□□□□□ -0.66
VPS9D1-205ENST00000565452 ICA1Q05084 483 aa10.95□□□□□ -0.66
VPS9D1-205ENST00000565452 SNRNP48Q6IEG0 339 aaKnown RBP10.95□□□□□ -0.66
VPS9D1-205ENST00000565452 CCDC17Q96LX7 622 aa10.95□□□□□ -0.66
VPS9D1-205ENST00000565452 ALDH8A1Q9H2A2 487 aaPredicted RBP10.95□□□□□ -0.66
VPS9D1-205ENST00000565452 SUGCTQ9HAC7 445 aa10.95□□□□□ -0.66
VPS9D1-205ENST00000565452 GOPCQ9HD26 462 aa10.95□□□□□ -0.66
VPS9D1-205ENST00000565452 GPR108Q9NPR9 543 aa10.95□□□□□ -0.66
VPS9D1-205ENST00000565452 PIH1D3Q9NQM4 214 aaKnown RBP10.95□□□□□ -0.66
VPS9D1-205ENST00000565452 MCM9Q9NXL9 1143 aa10.95□□□□□ -0.66
VPS9D1-205ENST00000565452 CTNNA3Q9UI47 895 aa10.95□□□□□ -0.66
VPS9D1-205ENST00000565452 ZBED4O75132 1171 aa10.94□□□□□ -0.66
VPS9D1-205ENST00000565452 BAIAP3O94812 1187 aa10.94□□□□□ -0.66
VPS9D1-205ENST00000565452 GNAI3P08754 354 aa10.94□□□□□ -0.66
VPS9D1-205ENST00000565452 CYP2C9P11712 490 aa10.94□□□□□ -0.66
VPS9D1-205ENST00000565452 IQSEC1Q6DN90 963 aa10.94□□□□□ -0.66
VPS9D1-205ENST00000565452 ARMCX2Q7L311 632 aa10.94□□□□□ -0.66
VPS9D1-205ENST00000565452 CCDC144CPQ8IYA2 1237 aa10.94□□□□□ -0.66
VPS9D1-205ENST00000565452 REPS2Q8NFH8 660 aa10.94□□□□□ -0.66
VPS9D1-205ENST00000565452 GDPD5Q8WTR4 605 aa10.94□□□□□ -0.66
VPS9D1-205ENST00000565452 TGS1Q96RS0 853 aaKnown RBP10.94□□□□□ -0.66
VPS9D1-205ENST00000565452 RAD9AQ99638 391 aa10.94□□□□□ -0.66
VPS9D1-205ENST00000565452 FBXO40Q9UH90 709 aa10.94□□□□□ -0.66
VPS9D1-205ENST00000565452 Q9Y3F1 56 aa10.94□□□□□ -0.66
VPS9D1-205ENST00000565452 LRRC37A2A6NM11 1700 aa10.94□□□□□ -0.66
VPS9D1-205ENST00000565452 WDFY4Q6ZS81 3184 aa10.93□□□□□ -0.66
VPS9D1-205ENST00000565452 C19orf67A6NJJ6 358 aa10.93□□□□□ -0.66
VPS9D1-205ENST00000565452 RAD21O60216 631 aa10.93□□□□□ -0.66
VPS9D1-205ENST00000565452 ERVK-21P61565 698 aa10.93□□□□□ -0.66
VPS9D1-205ENST00000565452 PSMC6P62333 389 aa10.93□□□□□ -0.66
VPS9D1-205ENST00000565452 MTX1Q13505 466 aa10.93□□□□□ -0.66
VPS9D1-205ENST00000565452 ALDH1L2Q3SY69 923 aa10.93□□□□□ -0.66
VPS9D1-205ENST00000565452 BMP8AQ7Z5Y6 402 aa10.93□□□□□ -0.66
VPS9D1-205ENST00000565452 TLK2Q86UE8 772 aa10.93□□□□□ -0.66
VPS9D1-205ENST00000565452 ADHFE1Q8IWW8 467 aa10.93□□□□□ -0.66
VPS9D1-205ENST00000565452 PRPF38AQ8NAV1 312 aaKnown RBP10.93□□□□□ -0.66
VPS9D1-205ENST00000565452 NEK9Q8TD19 979 aa10.93□□□□□ -0.66
VPS9D1-205ENST00000565452 ANKS1AQ92625 1134 aa10.93□□□□□ -0.66
VPS9D1-205ENST00000565452 CRNKL1Q9BZJ0 848 aaKnown RBP10.93□□□□□ -0.66
VPS9D1-205ENST00000565452 KANSL2Q9H9L4 492 aa10.93□□□□□ -0.66
VPS9D1-205ENST00000565452 GNEQ9Y223 722 aaKnown RBP10.93□□□□□ -0.66
VPS9D1-205ENST00000565452 RIPK3Q9Y572 518 aa10.93□□□□□ -0.66
VPS9D1-205ENST00000565452 PTPRZ1P23471 2315 aaPredicted RBP10.93□□□□□ -0.66
VPS9D1-205ENST00000565452 SIPA1L1O43166 1804 aa10.93□□□□□ -0.66
VPS9D1-205ENST00000565452 TNKSO95271 1327 aa10.92□□□□□ -0.66
VPS9D1-205ENST00000565452 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.92□□□□□ -0.66
VPS9D1-205ENST00000565452 ASB14A6NK59 587 aa10.92□□□□□ -0.66
VPS9D1-205ENST00000565452 ATP2A1O14983 1001 aa10.92□□□□□ -0.66
VPS9D1-205ENST00000565452 IQCF3P0C7M6 154 aa10.92□□□□□ -0.66
VPS9D1-205ENST00000565452 EEF2P13639 858 aaKnown RBP10.92□□□□□ -0.66
VPS9D1-205ENST00000565452 ZP2Q05996 745 aa10.92□□□□□ -0.66
VPS9D1-205ENST00000565452 PTPROQ16827 1216 aa10.92□□□□□ -0.66
VPS9D1-205ENST00000565452 IER5LQ5T953 404 aa10.92□□□□□ -0.66
VPS9D1-205ENST00000565452 ERMP1Q7Z2K6 904 aa10.92□□□□□ -0.66
VPS9D1-205ENST00000565452 SPRED2Q7Z698 418 aa10.92□□□□□ -0.66
VPS9D1-205ENST00000565452 CPXCR1Q8N123 301 aa10.92□□□□□ -0.66
VPS9D1-205ENST00000565452 CHST13Q8NET6 341 aa10.92□□□□□ -0.66
VPS9D1-205ENST00000565452 PRSS33Q8NF86 280 aa10.92□□□□□ -0.66
VPS9D1-205ENST00000565452 CRBNQ96SW2 442 aa10.92□□□□□ -0.66
VPS9D1-205ENST00000565452 MEIS3Q99687 375 aa10.92□□□□□ -0.66
VPS9D1-205ENST00000565452 SLF1Q9BQI6 1058 aa10.92□□□□□ -0.66
VPS9D1-205ENST00000565452 DBNDD2Q9BQY9 259 aa10.92□□□□□ -0.66
VPS9D1-205ENST00000565452 KATNBL1Q9H079 304 aa10.92□□□□□ -0.66
VPS9D1-205ENST00000565452 GPHNQ9NQX3 736 aaPredicted RBP10.92□□□□□ -0.66
VPS9D1-205ENST00000565452 TRMT13Q9NUP7 481 aaKnown RBP10.92□□□□□ -0.66
VPS9D1-205ENST00000565452 POLR3EQ9NVU0 708 aa10.92□□□□□ -0.66
VPS9D1-205ENST00000565452 MTUS1Q9ULD2 1270 aa10.92□□□□□ -0.66
VPS9D1-205ENST00000565452 ZDBF2Q9HCK1 2354 aa10.92□□□□□ -0.66
VPS9D1-205ENST00000565452 ZFHX2Q9C0A1 2572 aaPredicted RBP10.92□□□□□ -0.66
VPS9D1-205ENST00000565452 ASTN1O14525 1302 aa10.91□□□□□ -0.66
VPS9D1-205ENST00000565452 MAGEB6P1A0A0J9YX57 407 aa10.91□□□□□ -0.66
VPS9D1-205ENST00000565452 LCHNA4D1U4 455 aa10.91□□□□□ -0.66
VPS9D1-205ENST00000565452 H3BQ06 376 aaPredicted RBP10.91□□□□□ -0.66
VPS9D1-205ENST00000565452 PITPNM1O00562 1244 aa10.91□□□□□ -0.66
VPS9D1-205ENST00000565452 AKR1B1P15121 316 aa10.91□□□□□ -0.66
VPS9D1-205ENST00000565452 BFSP2Q13515 415 aa10.91□□□□□ -0.66
VPS9D1-205ENST00000565452 TNNI3KQ59H18 835 aa10.91□□□□□ -0.66
VPS9D1-205ENST00000565452 HERC4Q5GLZ8 1057 aaPredicted RBP10.91□□□□□ -0.66
VPS9D1-205ENST00000565452 FAM83BQ5T0W9 1011 aa10.91□□□□□ -0.66
VPS9D1-205ENST00000565452 EP400NLQ6ZTU2 488 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms