RNA–Protein interactions for RNA: ENST00000565393.2

TCF4-228, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 314 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-228ENST00000565393 ACLYP53396 1101 aa7.56□□□□□ -1.2
TCF4-228ENST00000565393 TNFAIP2Q03169 654 aa7.56□□□□□ -1.2
TCF4-228ENST00000565393 TLE2Q04725 743 aa7.56□□□□□ -1.2
TCF4-228ENST00000565393 TKFCQ3LXA3 575 aa7.56□□□□□ -1.2
TCF4-228ENST00000565393 LRIT3Q3SXY7 679 aa7.56□□□□□ -1.2
TCF4-228ENST00000565393 GNASQ5JWF2 1037 aa7.56□□□□□ -1.2
TCF4-228ENST00000565393 TTBK2Q6IQ55 1244 aa7.56□□□□□ -1.2
TCF4-228ENST00000565393 NSMFQ6X4W1 530 aa7.56□□□□□ -1.2
TCF4-228ENST00000565393 ZNF467Q7Z7K2 595 aaPredicted RBP7.56□□□□□ -1.2
TCF4-228ENST00000565393 CCDC144CPQ8IYA2 1237 aa7.56□□□□□ -1.2
TCF4-228ENST00000565393 DEFB123Q8N688 67 aa7.56□□□□□ -1.2
TCF4-228ENST00000565393 LENG1Q96BZ8 264 aaPredicted RBP7.56□□□□□ -1.2
TCF4-228ENST00000565393 TTC14Q96N46 770 aa7.56□□□□□ -1.2
TCF4-228ENST00000565393 TMEM47Q9BQJ4 181 aa7.56□□□□□ -1.2
TCF4-228ENST00000565393 ZKSCAN3Q9BRR0 538 aa7.56□□□□□ -1.2
TCF4-228ENST00000565393 TSEN34Q9BSV6 310 aaKnown RBP7.56□□□□□ -1.2
TCF4-228ENST00000565393 ABHD16BQ9H3Z7 469 aa7.56□□□□□ -1.2
TCF4-228ENST00000565393 RNF41Q9H4P4 317 aaPredicted RBP7.56□□□□□ -1.2
TCF4-228ENST00000565393 STARD7Q9NQZ5 370 aa7.56□□□□□ -1.2
TCF4-228ENST00000565393 RNF146Q9NTX7 359 aa7.56□□□□□ -1.2
TCF4-228ENST00000565393 TCP11L1Q9NUJ3 509 aa7.56□□□□□ -1.2
TCF4-228ENST00000565393 TMEM39AQ9NV64 488 aa7.56□□□□□ -1.2
TCF4-228ENST00000565393 CCPG1Q9ULG6 757 aa7.56□□□□□ -1.2
TCF4-228ENST00000565393 PHF24Q9UPV7 400 aa7.56□□□□□ -1.2
TCF4-228ENST00000565393 PTPRFP10586 1907 aa7.56□□□□□ -1.2
TCF4-228ENST00000565393 CCDC171Q6TFL3 1326 aa7.55□□□□□ -1.2
TCF4-228ENST00000565393 FOCADQ5VW36 1801 aa7.55□□□□□ -1.2
TCF4-228ENST00000565393 A0A1W2PQ45 241 aaPredicted RBP7.55□□□□□ -1.2
TCF4-228ENST00000565393 A0A1W2PQY0 241 aa7.55□□□□□ -1.2
TCF4-228ENST00000565393 TRIM43BA6NCK2 446 aa7.55□□□□□ -1.2
TCF4-228ENST00000565393 SOWAHBA6NEL2 793 aa7.55□□□□□ -1.2
TCF4-228ENST00000565393 ASB14A6NK59 587 aa7.55□□□□□ -1.2
TCF4-228ENST00000565393 HIP1O00291 1037 aa7.55□□□□□ -1.2
TCF4-228ENST00000565393 PQBP1O60828 265 aaKnown RBP7.55□□□□□ -1.2
TCF4-228ENST00000565393 DUSP11O75319 330 aaKnown RBP7.55□□□□□ -1.2
TCF4-228ENST00000565393 FGRP09769 529 aa7.55□□□□□ -1.2
TCF4-228ENST00000565393 IRX5P78411 483 aaPredicted RBP7.55□□□□□ -1.2
TCF4-228ENST00000565393 SHHQ15465 462 aa7.55□□□□□ -1.2
TCF4-228ENST00000565393 CCDC144BQ3MJ40 725 aa7.55□□□□□ -1.2
TCF4-228ENST00000565393 MUM1L1Q5H9M0 696 aa7.55□□□□□ -1.2
TCF4-228ENST00000565393 AKNAD1Q5T1N1 836 aa7.55□□□□□ -1.2
TCF4-228ENST00000565393 ARMCX2Q7L311 632 aa7.55□□□□□ -1.2
TCF4-228ENST00000565393 EEPD1Q7L9B9 569 aa7.55□□□□□ -1.2
TCF4-228ENST00000565393 SH3RF1Q7Z6J0 888 aa7.55□□□□□ -1.2
TCF4-228ENST00000565393 ZNF589Q86UQ0 364 aaPredicted RBP7.55□□□□□ -1.2
TCF4-228ENST00000565393 PCSK9Q8NBP7 692 aaKnown RBP7.55□□□□□ -1.2
TCF4-228ENST00000565393 SLC17A8Q8NDX2 589 aa7.55□□□□□ -1.2
TCF4-228ENST00000565393 DCAF4Q8WV16 495 aa7.55□□□□□ -1.2
TCF4-228ENST00000565393 ESR2Q92731 530 aa7.55□□□□□ -1.2
TCF4-228ENST00000565393 TRIM43Q96BQ3 446 aaPredicted RBP7.55□□□□□ -1.2
TCF4-228ENST00000565393 GLT1D1Q96MS3 346 aa7.55□□□□□ -1.2
TCF4-228ENST00000565393 AP5M1Q9H0R1 490 aa7.55□□□□□ -1.2
TCF4-228ENST00000565393 ZNF536O15090 1300 aa7.54□□□□□ -1.2
TCF4-228ENST00000565393 PTPDC1A2A3K4 754 aa7.54□□□□□ -1.2
TCF4-228ENST00000565393 MOXD2PA6NHM9 499 aa7.54□□□□□ -1.2
TCF4-228ENST00000565393 DYNC1LI2O43237 492 aaPredicted RBP7.54□□□□□ -1.2
TCF4-228ENST00000565393 ADAMTS4O75173 837 aa7.54□□□□□ -1.2
TCF4-228ENST00000565393 ICAM1P05362 532 aa7.54□□□□□ -1.2
TCF4-228ENST00000565393 ASGR1P07306 291 aa7.54□□□□□ -1.2
TCF4-228ENST00000565393 CLTBP09497 229 aa7.54□□□□□ -1.2
TCF4-228ENST00000565393 BAATQ14032 418 aaPredicted RBP7.54□□□□□ -1.2
TCF4-228ENST00000565393 SYDE2Q5VT97 1194 aa7.54□□□□□ -1.2
TCF4-228ENST00000565393 C1orf53Q5VUE5 145 aa7.54□□□□□ -1.2
TCF4-228ENST00000565393 IQSEC1Q6DN90 963 aa7.54□□□□□ -1.2
TCF4-228ENST00000565393 KIAA1211Q6ZU35 1233 aa7.54□□□□□ -1.2
TCF4-228ENST00000565393 Q7L0L9 218 aa7.54□□□□□ -1.2
TCF4-228ENST00000565393 FAM133AQ8N9E0 248 aa7.54□□□□□ -1.2
TCF4-228ENST00000565393 KLHDC9Q8NEP7 349 aa7.54□□□□□ -1.2
TCF4-228ENST00000565393 OSBPL3Q9H4L5 887 aa7.54□□□□□ -1.2
TCF4-228ENST00000565393 A1CFQ9NQ94 594 aaKnown RBP7.54□□□□□ -1.2
TCF4-228ENST00000565393 CYP39A1Q9NYL5 469 aa7.54□□□□□ -1.2
TCF4-228ENST00000565393 CTNNA3Q9UI47 895 aa7.54□□□□□ -1.2
TCF4-228ENST00000565393 DDX60LQ5H9U9 1706 aaKnown RBP7.54□□□□□ -1.2
TCF4-228ENST00000565393 PLXNB2O15031 1838 aa7.54□□□□□ -1.2
TCF4-228ENST00000565393 SYNRGQ9UMZ2 1314 aa7.53□□□□□ -1.2
TCF4-228ENST00000565393 CDK5RAP2Q96SN8 1893 aa7.53□□□□□ -1.2
TCF4-228ENST00000565393 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.53□□□□□ -1.2
TCF4-228ENST00000565393 MYADML2A6NDP7 307 aa7.53□□□□□ -1.2
TCF4-228ENST00000565393 ZEB2O60315 1214 aa7.53□□□□□ -1.2
TCF4-228ENST00000565393 KDM4AO75164 1064 aa7.53□□□□□ -1.2
TCF4-228ENST00000565393 GOLGA8HP0CJ92 632 aa7.53□□□□□ -1.2
TCF4-228ENST00000565393 PDHBP11177 359 aa7.53□□□□□ -1.2
TCF4-228ENST00000565393 PCP11498 1178 aaKnown RBP7.53□□□□□ -1.2
TCF4-228ENST00000565393 CALML3P27482 149 aa7.53□□□□□ -1.2
TCF4-228ENST00000565393 NOVP48745 357 aa7.53□□□□□ -1.2
TCF4-228ENST00000565393 GJA9P57773 515 aa7.53□□□□□ -1.2
TCF4-228ENST00000565393 IRX6P78412 446 aaPredicted RBP7.53□□□□□ -1.2
TCF4-228ENST00000565393 BEX3Q00994 111 aa7.53□□□□□ -1.2
TCF4-228ENST00000565393 FAAP100Q0VG06 881 aa7.53□□□□□ -1.2
TCF4-228ENST00000565393 SNX17Q15036 470 aa7.53□□□□□ -1.2
TCF4-228ENST00000565393 IMMTQ16891 758 aaKnown RBP7.53□□□□□ -1.2
TCF4-228ENST00000565393 CCDC178Q5BJE1 867 aa7.53□□□□□ -1.2
TCF4-228ENST00000565393 GPR153Q6NV75 609 aa7.53□□□□□ -1.2
TCF4-228ENST00000565393 BTNL9Q6UXG8 535 aa7.53□□□□□ -1.2
TCF4-228ENST00000565393 RASGRP2Q7LDG7 609 aa7.53□□□□□ -1.2
TCF4-228ENST00000565393 IQCA1Q86XH1 822 aa7.53□□□□□ -1.2
TCF4-228ENST00000565393 DGKHQ86XP1 1220 aa7.53□□□□□ -1.2
TCF4-228ENST00000565393 FAM161BQ96MY7 647 aa7.53□□□□□ -1.2
TCF4-228ENST00000565393 PURBQ96QR8 312 aaKnown RBP7.53□□□□□ -1.2
TCF4-228ENST00000565393 ZSCAN10Q96SZ4 725 aaPredicted RBP7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms