RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 LAMA3Q16787 3333 aa16.03■□□□□ 0.16
VPS9D1-204ENST00000565023 PFASO15067 1338 aa16.03■□□□□ 0.16
VPS9D1-204ENST00000565023 ATP2A1O14983 1001 aa16.03■□□□□ 0.16
VPS9D1-204ENST00000565023 MSCO60682 206 aa16.03■□□□□ 0.16
VPS9D1-204ENST00000565023 CHMLP26374 656 aa16.03■□□□□ 0.16
VPS9D1-204ENST00000565023 TINF2Q9BSI4 451 aa16.03■□□□□ 0.16
VPS9D1-204ENST00000565023 SENP6Q9GZR1 1112 aaPredicted RBP16.03■□□□□ 0.16
VPS9D1-204ENST00000565023 RNF146Q9NTX7 359 aa16.03■□□□□ 0.16
VPS9D1-204ENST00000565023 TCP11L1Q9NUJ3 509 aa16.03■□□□□ 0.16
VPS9D1-204ENST00000565023 CTNNA3Q9UI47 895 aa16.03■□□□□ 0.16
VPS9D1-204ENST00000565023 ZNF536O15090 1300 aa16.02■□□□□ 0.16
VPS9D1-204ENST00000565023 SEPT4O43236 478 aa16.02■□□□□ 0.16
VPS9D1-204ENST00000565023 PCP11498 1178 aaKnown RBP16.02■□□□□ 0.16
VPS9D1-204ENST00000565023 SYN1P17600 705 aa16.02■□□□□ 0.16
VPS9D1-204ENST00000565023 ATN1P54259 1190 aaPredicted RBP16.02■□□□□ 0.16
VPS9D1-204ENST00000565023 OAZ1P54368 228 aa16.02■□□□□ 0.16
VPS9D1-204ENST00000565023 CHST13Q8NET6 341 aa16.02■□□□□ 0.16
VPS9D1-204ENST00000565023 RUFY2Q8WXA3 655 aa16.02■□□□□ 0.16
VPS9D1-204ENST00000565023 LENG1Q96BZ8 264 aaPredicted RBP16.02■□□□□ 0.16
VPS9D1-204ENST00000565023 TRERF1Q96PN7 1200 aa16.02■□□□□ 0.16
VPS9D1-204ENST00000565023 ACAD9Q9H845 621 aa16.02■□□□□ 0.16
VPS9D1-204ENST00000565023 FBXO40Q9UH90 709 aa16.02■□□□□ 0.16
VPS9D1-204ENST00000565023 ZHX1Q9UKY1 873 aaPredicted RBP16.02■□□□□ 0.16
VPS9D1-204ENST00000565023 CCPG1Q9ULG6 757 aa16.02■□□□□ 0.16
VPS9D1-204ENST00000565023 DLL1O00548 723 aa16.01■□□□□ 0.15
VPS9D1-204ENST00000565023 IGHA2P01877 340 aa16.01■□□□□ 0.15
VPS9D1-204ENST00000565023 GOLGA8HP0CJ92 632 aa16.01■□□□□ 0.15
VPS9D1-204ENST00000565023 FDX1P10109 184 aa16.01■□□□□ 0.15
VPS9D1-204ENST00000565023 PDHBP11177 359 aa16.01■□□□□ 0.15
VPS9D1-204ENST00000565023 NOVP48745 357 aa16.01■□□□□ 0.15
VPS9D1-204ENST00000565023 CNTN2Q02246 1040 aa16.01■□□□□ 0.15
VPS9D1-204ENST00000565023 PTH1RQ03431 593 aa16.01■□□□□ 0.15
VPS9D1-204ENST00000565023 SYDE2Q5VT97 1194 aa16.01■□□□□ 0.15
VPS9D1-204ENST00000565023 IQCA1Q86XH1 822 aa16.01■□□□□ 0.15
VPS9D1-204ENST00000565023 CNPY2Q9Y2B0 182 aa16.01■□□□□ 0.15
VPS9D1-204ENST00000565023 DIS3Q9Y2L1 958 aaKnown RBP16.01■□□□□ 0.15
VPS9D1-204ENST00000565023 RAD50Q92878 1312 aa16■□□□□ 0.15
VPS9D1-204ENST00000565023 POTEB2H3BUK9 544 aa16■□□□□ 0.15
VPS9D1-204ENST00000565023 PLA2G6O60733 806 aa16■□□□□ 0.15
VPS9D1-204ENST00000565023 MUM1L1Q5H9M0 696 aa16■□□□□ 0.15
VPS9D1-204ENST00000565023 NSMFQ6X4W1 530 aa16■□□□□ 0.15
VPS9D1-204ENST00000565023 TTC14Q96N46 770 aa16■□□□□ 0.15
VPS9D1-204ENST00000565023 CPVLQ9H3G5 476 aa16■□□□□ 0.15
VPS9D1-204ENST00000565023 KAT14Q9H8E8 782 aa16■□□□□ 0.15
VPS9D1-204ENST00000565023 DNAJC25-GNG10A0A024R161 153 aa15.99■□□□□ 0.15
VPS9D1-204ENST00000565023 KBTBD13C9JR72 458 aa15.99■□□□□ 0.15
VPS9D1-204ENST00000565023 LRRC26Q2I0M4 334 aa15.99■□□□□ 0.15
VPS9D1-204ENST00000565023 BMP2KLQ5H9B9 411 aa15.99■□□□□ 0.15
VPS9D1-204ENST00000565023 ARRDC4Q8NCT1 418 aa15.99■□□□□ 0.15
VPS9D1-204ENST00000565023 FERMT2Q96AC1 680 aa15.99■□□□□ 0.15
VPS9D1-204ENST00000565023 ZSCAN10Q96SZ4 725 aaPredicted RBP15.99■□□□□ 0.15
VPS9D1-204ENST00000565023 KRT23Q9C075 422 aa15.99■□□□□ 0.15
VPS9D1-204ENST00000565023 UBA5Q9GZZ9 404 aa15.99■□□□□ 0.15
VPS9D1-204ENST00000565023 A1CFQ9NQ94 594 aaKnown RBP15.99■□□□□ 0.15
VPS9D1-204ENST00000565023 ZSWIM5Q9P217 1185 aa15.99■□□□□ 0.15
VPS9D1-204ENST00000565023 MYH6P13533 1939 aa15.99■□□□□ 0.15
VPS9D1-204ENST00000565023 TNKSO95271 1327 aa15.98■□□□□ 0.15
VPS9D1-204ENST00000565023 DNM1LO00429 736 aa15.98■□□□□ 0.15
VPS9D1-204ENST00000565023 SNAI1O95863 264 aaPredicted RBP15.98■□□□□ 0.15
VPS9D1-204ENST00000565023 PGK1P00558 417 aa15.98■□□□□ 0.15
VPS9D1-204ENST00000565023 ZNF865P0CJ78 1059 aaPredicted RBP15.98■□□□□ 0.15
VPS9D1-204ENST00000565023 RARBP10826 455 aa15.98■□□□□ 0.15
VPS9D1-204ENST00000565023 COL6A1P12109 1028 aa15.98■□□□□ 0.15
VPS9D1-204ENST00000565023 ZNF543Q08ER8 600 aa15.98■□□□□ 0.15
VPS9D1-204ENST00000565023 PNMA1Q8ND90 353 aa15.98■□□□□ 0.15
VPS9D1-204ENST00000565023 FGD4Q96M96 766 aa15.98■□□□□ 0.15
VPS9D1-204ENST00000565023 UBAC1Q9BSL1 405 aa15.98■□□□□ 0.15
VPS9D1-204ENST00000565023 RANBP17Q9H2T7 1088 aaKnown RBP15.98■□□□□ 0.15
VPS9D1-204ENST00000565023 XPNPEP3Q9NQH7 507 aa15.98■□□□□ 0.15
VPS9D1-204ENST00000565023 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.98■□□□□ 0.15
VPS9D1-204ENST00000565023 DDX49Q9Y6V7 483 aaKnown RBP15.98■□□□□ 0.15
VPS9D1-204ENST00000565023 SGSM2O43147 1006 aa15.97■□□□□ 0.15
VPS9D1-204ENST00000565023 DHX16O60231 1041 aaKnown RBP15.97■□□□□ 0.15
VPS9D1-204ENST00000565023 ICAM1P05362 532 aa15.97■□□□□ 0.15
VPS9D1-204ENST00000565023 AKR1A1P14550 325 aa15.97■□□□□ 0.15
VPS9D1-204ENST00000565023 TRDNQ13061 729 aa15.97■□□□□ 0.15
VPS9D1-204ENST00000565023 LRRC41Q15345 812 aa15.97■□□□□ 0.15
VPS9D1-204ENST00000565023 TKFCQ3LXA3 575 aa15.97■□□□□ 0.15
VPS9D1-204ENST00000565023 CCDC178Q5BJE1 867 aa15.97■□□□□ 0.15
VPS9D1-204ENST00000565023 BTNL9Q6UXG8 535 aa15.97■□□□□ 0.15
VPS9D1-204ENST00000565023 CYB5R4Q7L1T6 521 aa15.97■□□□□ 0.15
VPS9D1-204ENST00000565023 ARMCX2Q7L311 632 aa15.97■□□□□ 0.15
VPS9D1-204ENST00000565023 DGKHQ86XP1 1220 aa15.97■□□□□ 0.15
VPS9D1-204ENST00000565023 ENAHQ8N8S7 591 aaPredicted RBP15.97■□□□□ 0.15
VPS9D1-204ENST00000565023 PURBQ96QR8 312 aaKnown RBP15.97■□□□□ 0.15
VPS9D1-204ENST00000565023 CNNM2Q9H8M5 875 aa15.97■□□□□ 0.15
VPS9D1-204ENST00000565023 RBM27Q9P2N5 1060 aaKnown RBP15.97■□□□□ 0.15
VPS9D1-204ENST00000565023 LCTP09848 1927 aa15.97■□□□□ 0.15
VPS9D1-204ENST00000565023 SYNGAP1Q96PV0 1343 aa15.96■□□□□ 0.15
VPS9D1-204ENST00000565023 SOWAHBA6NEL2 793 aa15.96■□□□□ 0.15
VPS9D1-204ENST00000565023 CYP21A2P08686 494 aa15.96■□□□□ 0.15
VPS9D1-204ENST00000565023 ADCYAP1R1P41586 468 aa15.96■□□□□ 0.15
VPS9D1-204ENST00000565023 USH1GQ495M9 461 aa15.96■□□□□ 0.15
VPS9D1-204ENST00000565023 IFIT1BQ5T764 474 aaKnown RBP15.96■□□□□ 0.15
VPS9D1-204ENST00000565023 CCDC144CPQ8IYA2 1237 aa15.96■□□□□ 0.15
VPS9D1-204ENST00000565023 NRBP1Q9UHY1 535 aa15.96■□□□□ 0.15
VPS9D1-204ENST00000565023 FAM184BQ9ULE4 1060 aa15.96■□□□□ 0.15
VPS9D1-204ENST00000565023 ATP11BQ9Y2G3 1177 aa15.96■□□□□ 0.15
VPS9D1-204ENST00000565023 TAF6LQ9Y6J9 622 aa15.96■□□□□ 0.15
VPS9D1-204ENST00000565023 U3KPZ7 1027 aaPredicted RBP15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms