RNA–Protein interactions for RNA: ENST00000564988.5

TM6SF1-206, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 4

Gene TM6SF1, Length 548 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-206ENST00000564988 CCDC174Q6PII3 467 aa28.33■■■□□ 2.13
TM6SF1-206ENST00000564988 CPXCR1Q8N123 301 aa28.33■■■□□ 2.13
TM6SF1-206ENST00000564988 CMTR1Q8N1G2 835 aaKnown RBP28.33■■■□□ 2.13
TM6SF1-206ENST00000564988 MTMR8Q96EF0 704 aa28.33■■■□□ 2.13
TM6SF1-206ENST00000564988 RRP36Q96EU6 259 aaKnown RBP28.33■■■□□ 2.13
TM6SF1-206ENST00000564988 RAVER2Q9HCJ3 691 aaKnown RBP28.33■■■□□ 2.13
TM6SF1-206ENST00000564988 SH2B1Q9NRF2 756 aaPredicted RBP28.33■■■□□ 2.13
TM6SF1-206ENST00000564988 TSKSQ9UJT2 592 aa28.33■■■□□ 2.13
TM6SF1-206ENST00000564988 PEX10O60683 326 aa28.32■■■□□ 2.12
TM6SF1-206ENST00000564988 LARGE1O95461 756 aa28.32■■■□□ 2.12
TM6SF1-206ENST00000564988 COPB2P35606 906 aa28.32■■■□□ 2.12
TM6SF1-206ENST00000564988 STAT3P40763 770 aa28.32■■■□□ 2.12
TM6SF1-206ENST00000564988 SP3Q02447 781 aa28.32■■■□□ 2.12
TM6SF1-206ENST00000564988 SCRN1Q12765 414 aa28.32■■■□□ 2.12
TM6SF1-206ENST00000564988 CCDC82Q8N4S0 544 aa28.32■■■□□ 2.12
TM6SF1-206ENST00000564988 CNTNAP5Q8WYK1 1306 aa28.32■■■□□ 2.12
TM6SF1-206ENST00000564988 ZBTB5O15062 677 aa28.31■■■□□ 2.12
TM6SF1-206ENST00000564988 ICAM1P05362 532 aa28.31■■■□□ 2.12
TM6SF1-206ENST00000564988 FUT2Q10981 343 aa28.31■■■□□ 2.12
TM6SF1-206ENST00000564988 Q3C1V9 767 aa28.31■■■□□ 2.12
TM6SF1-206ENST00000564988 SNRNP48Q6IEG0 339 aaKnown RBP28.31■■■□□ 2.12
TM6SF1-206ENST00000564988 HOMER1Q86YM7 354 aa28.31■■■□□ 2.12
TM6SF1-206ENST00000564988 RIOX2Q8IUF8 465 aa28.31■■■□□ 2.12
TM6SF1-206ENST00000564988 GTF3C6Q969F1 213 aa28.31■■■□□ 2.12
TM6SF1-206ENST00000564988 PIGSQ96S52 555 aa28.31■■■□□ 2.12
TM6SF1-206ENST00000564988 SEC63Q9UGP8 760 aaKnown RBP28.31■■■□□ 2.12
TM6SF1-206ENST00000564988 ZNF536O15090 1300 aa28.31■■■□□ 2.12
TM6SF1-206ENST00000564988 COL11A1P12107 1806 aaPredicted RBP28.3■■■□□ 2.12
TM6SF1-206ENST00000564988 FOXN1O15353 648 aa28.3■■■□□ 2.12
TM6SF1-206ENST00000564988 FKTNO75072 461 aa28.3■■■□□ 2.12
TM6SF1-206ENST00000564988 CD2BP2O95400 341 aaKnown RBP28.3■■■□□ 2.12
TM6SF1-206ENST00000564988 SLC25A27O95847 323 aa28.3■■■□□ 2.12
TM6SF1-206ENST00000564988 IFNAR1P17181 557 aa28.3■■■□□ 2.12
TM6SF1-206ENST00000564988 QRICH1Q2TAL8 776 aa28.3■■■□□ 2.12
TM6SF1-206ENST00000564988 CCAR1Q8IX12 1150 aaKnown RBP28.3■■■□□ 2.12
TM6SF1-206ENST00000564988 SHCBP1Q8NEM2 672 aa28.3■■■□□ 2.12
TM6SF1-206ENST00000564988 MOV10L1Q9BXT6 1211 aaKnown RBP28.3■■■□□ 2.12
TM6SF1-206ENST00000564988 CCPG1Q9ULG6 757 aa28.3■■■□□ 2.12
TM6SF1-206ENST00000564988 PNMA6FA0A0J9YX94 578 aa28.29■■■□□ 2.12
TM6SF1-206ENST00000564988 CDKL5O76039 1030 aa28.29■■■□□ 2.12
TM6SF1-206ENST00000564988 CTCFP49711 727 aaPredicted RBP28.29■■■□□ 2.12
TM6SF1-206ENST00000564988 TRAF1Q13077 416 aa28.29■■■□□ 2.12
TM6SF1-206ENST00000564988 KIF22Q14807 665 aa28.29■■■□□ 2.12
TM6SF1-206ENST00000564988 NTRK3Q16288 839 aa28.29■■■□□ 2.12
TM6SF1-206ENST00000564988 NECAB1Q8N987 351 aa28.29■■■□□ 2.12
TM6SF1-206ENST00000564988 RBM27Q9P2N5 1060 aaKnown RBP28.29■■■□□ 2.12
TM6SF1-206ENST00000564988 HSPA8P11142 646 aaKnown RBP28.28■■■□□ 2.12
TM6SF1-206ENST00000564988 MAPK4P31152 587 aa28.28■■■□□ 2.12
TM6SF1-206ENST00000564988 LACTBP83111 547 aaPredicted RBP28.28■■■□□ 2.12
TM6SF1-206ENST00000564988 TKFCQ3LXA3 575 aa28.28■■■□□ 2.12
TM6SF1-206ENST00000564988 FBXO11Q86XK2 927 aa28.28■■■□□ 2.12
TM6SF1-206ENST00000564988 ZNF296Q8WUU4 475 aaPredicted RBP28.28■■■□□ 2.12
TM6SF1-206ENST00000564988 PIBF1Q8WXW3 757 aa28.28■■■□□ 2.12
TM6SF1-206ENST00000564988 AGBL1Q96MI9 1066 aa28.28■■■□□ 2.12
TM6SF1-206ENST00000564988 SLC4A3P48751 1232 aa28.27■■■□□ 2.12
TM6SF1-206ENST00000564988 AKAP17AQ02040 695 aaKnown RBP28.27■■■□□ 2.12
TM6SF1-206ENST00000564988 NCAPG2Q86XI2 1143 aa28.27■■■□□ 2.12
TM6SF1-206ENST00000564988 ERO1AQ96HE7 468 aa28.27■■■□□ 2.12
TM6SF1-206ENST00000564988 AMNQ9BXJ7 453 aa28.27■■■□□ 2.12
TM6SF1-206ENST00000564988 PORCNQ9H237 461 aa28.27■■■□□ 2.12
TM6SF1-206ENST00000564988 MROH8Q9H579 483 aa28.27■■■□□ 2.12
TM6SF1-206ENST00000564988 CWC22Q9HCG8 908 aaKnown RBP28.27■■■□□ 2.12
TM6SF1-206ENST00000564988 ERCC3P19447 782 aa28.26■■■□□ 2.11
TM6SF1-206ENST00000564988 TRIM22Q8IYM9 498 aa28.26■■■□□ 2.11
TM6SF1-206ENST00000564988 RNF26Q9BY78 433 aaPredicted RBP28.26■■■□□ 2.11
TM6SF1-206ENST00000564988 V9GY48 417 aaPredicted RBP28.26■■■□□ 2.11
TM6SF1-206ENST00000564988 PRPF3O43395 683 aaKnown RBP28.25■■■□□ 2.11
TM6SF1-206ENST00000564988 ALAS1P13196 640 aa28.25■■■□□ 2.11
TM6SF1-206ENST00000564988 FCGRTP55899 365 aa28.25■■■□□ 2.11
TM6SF1-206ENST00000564988 SSRP1Q08945 709 aaKnown RBP28.25■■■□□ 2.11
TM6SF1-206ENST00000564988 CHST13Q8NET6 341 aa28.25■■■□□ 2.11
TM6SF1-206ENST00000564988 PHKBQ93100 1093 aa28.25■■■□□ 2.11
TM6SF1-206ENST00000564988 TMX3Q96JJ7 454 aa28.25■■■□□ 2.11
TM6SF1-206ENST00000564988 SLC26A6Q9BXS9 759 aa28.25■■■□□ 2.11
TM6SF1-206ENST00000564988 EFCC1Q9HA90 598 aa28.25■■■□□ 2.11
TM6SF1-206ENST00000564988 FBXO40Q9UH90 709 aa28.25■■■□□ 2.11
TM6SF1-206ENST00000564988 ARHGEF6Q15052 776 aa28.24■■■□□ 2.11
TM6SF1-206ENST00000564988 USH1GQ495M9 461 aa28.24■■■□□ 2.11
TM6SF1-206ENST00000564988 WDR78Q5VTH9 848 aa28.24■■■□□ 2.11
TM6SF1-206ENST00000564988 CCDC83Q8IWF9 413 aa28.24■■■□□ 2.11
TM6SF1-206ENST00000564988 SNX21Q969T3 373 aa28.24■■■□□ 2.11
TM6SF1-206ENST00000564988 RNF146Q9NTX7 359 aa28.24■■■□□ 2.11
TM6SF1-206ENST00000564988 RIPK3Q9Y572 518 aa28.24■■■□□ 2.11
TM6SF1-206ENST00000564988 ABCB11O95342 1321 aa28.23■■■□□ 2.11
TM6SF1-206ENST00000564988 hCG_1642624A0A1W2PR95 340 aa28.23■■■□□ 2.11
TM6SF1-206ENST00000564988 PPP1R11O60927 126 aaPredicted RBP28.23■■■□□ 2.11
TM6SF1-206ENST00000564988 FMNL1O95466 1100 aaPredicted RBP28.23■■■□□ 2.11
TM6SF1-206ENST00000564988 PSMC4P43686 418 aa28.23■■■□□ 2.11
TM6SF1-206ENST00000564988 CD99L2Q8TCZ2 262 aa28.23■■■□□ 2.11
TM6SF1-206ENST00000564988 TRERF1Q96PN7 1200 aa28.23■■■□□ 2.11
TM6SF1-206ENST00000564988 HOMER2Q9NSB8 354 aa28.23■■■□□ 2.11
TM6SF1-206ENST00000564988 PCDHA1Q9Y5I3 950 aa28.23■■■□□ 2.11
TM6SF1-206ENST00000564988 IVNS1ABPQ9Y6Y0 642 aa28.23■■■□□ 2.11
TM6SF1-206ENST00000564988 TNPO2O14787 897 aaKnown RBP28.22■■■□□ 2.11
TM6SF1-206ENST00000564988 ST3GAL1Q11201 340 aa28.22■■■□□ 2.11
TM6SF1-206ENST00000564988 GPR142Q7Z601 462 aa28.22■■■□□ 2.11
TM6SF1-206ENST00000564988 PLEKHH3Q7Z736 793 aa28.22■■■□□ 2.11
TM6SF1-206ENST00000564988 ACAD9Q9H845 621 aa28.22■■■□□ 2.11
TM6SF1-206ENST00000564988 MRPL11Q9Y3B7 192 aaKnown RBP28.22■■■□□ 2.11
TM6SF1-206ENST00000564988 STK36Q9NRP7 1315 aa28.21■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms