RNA–Protein interactions for RNA: ENST00000564846.1

CLN6-205, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 1,762 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-205ENST00000564846 TMEM232C9JQI7 657 aa22.32■■□□□ 1.16
CLN6-205ENST00000564846 YBX3P16989 372 aaKnown RBP eCLIP22.32■■□□□ 1.16
CLN6-205ENST00000564846 PTGDRQ13258 359 aa22.32■■□□□ 1.16
CLN6-205ENST00000564846 NONOQ15233 471 aaKnown RBP eCLIP22.32■■□□□ 1.168e-7■■■□□ 15.9
CLN6-205ENST00000564846 CDC37Q16543 378 aaPredicted RBP22.32■■□□□ 1.16
CLN6-205ENST00000564846 QRICH1Q2TAL8 776 aa22.32■■□□□ 1.16
CLN6-205ENST00000564846 SYDE2Q5VT97 1194 aa22.32■■□□□ 1.16
CLN6-205ENST00000564846 DCAF15Q66K64 600 aa22.32■■□□□ 1.16
CLN6-205ENST00000564846 SASS6Q6UVJ0 657 aa22.32■■□□□ 1.16
CLN6-205ENST00000564846 GLT8D2Q9H1C3 349 aa22.32■■□□□ 1.16
CLN6-205ENST00000564846 RNF181Q9P0P0 153 aa22.32■■□□□ 1.16
CLN6-205ENST00000564846 PPP2R3BQ9Y5P8 575 aa22.32■■□□□ 1.16
CLN6-205ENST00000564846 CTNND1O60716 968 aaKnown RBP22.31■■□□□ 1.16
CLN6-205ENST00000564846 MCM7P33993 719 aa22.31■■□□□ 1.16
CLN6-205ENST00000564846 TYRO3Q06418 890 aa22.31■■□□□ 1.16
CLN6-205ENST00000564846 IKQ13123 557 aaPredicted RBP22.31■■□□□ 1.16
CLN6-205ENST00000564846 VCPKMTQ9H867 229 aa22.31■■□□□ 1.16
CLN6-205ENST00000564846 RIC8AQ9NPQ8 531 aa22.31■■□□□ 1.16
CLN6-205ENST00000564846 KCNH3Q9ULD8 1083 aa22.31■■□□□ 1.16
CLN6-205ENST00000564846 EPS15P42566 896 aa22.3■■□□□ 1.16
CLN6-205ENST00000564846 MRPL12P52815 198 aaKnown RBP22.3■■□□□ 1.16
CLN6-205ENST00000564846 INF2Q27J81 1249 aa22.3■■□□□ 1.16
CLN6-205ENST00000564846 ARL6IP4Q66PJ3 421 aaKnown RBP22.3■■□□□ 1.16
CLN6-205ENST00000564846 SPICE1Q8N0Z3 855 aa22.3■■□□□ 1.16
CLN6-205ENST00000564846 CSRNP2Q9H175 543 aa22.3■■□□□ 1.16
CLN6-205ENST00000564846 STAT2P52630 851 aa22.3■■□□□ 1.16
CLN6-205ENST00000564846 GRIN1Q05586 938 aa22.3■■□□□ 1.16
CLN6-205ENST00000564846 NBPF12Q5TAG4 269 aaPredicted RBP22.3■■□□□ 1.16
CLN6-205ENST00000564846 RNF214Q8ND24 703 aa22.3■■□□□ 1.16
CLN6-205ENST00000564846 CUL5Q93034 780 aa22.3■■□□□ 1.16
CLN6-205ENST00000564846 PANK2Q9BZ23 570 aa22.3■■□□□ 1.16
CLN6-205ENST00000564846 MRVI1Q9Y6F6 885 aa22.3■■□□□ 1.16
CLN6-205ENST00000564846 LMOD1P29536 600 aaPredicted RBP22.29■■□□□ 1.16
CLN6-205ENST00000564846 ANP32BQ92688 251 aaKnown RBP22.29■■□□□ 1.16
CLN6-205ENST00000564846 ZNF341Q9BYN7 854 aa22.29■■□□□ 1.16
CLN6-205ENST00000564846 GGA3Q9NZ52 723 aa22.29■■□□□ 1.16
CLN6-205ENST00000564846 BIN2Q9UBW5 565 aaPredicted RBP22.29■■□□□ 1.16
CLN6-205ENST00000564846 DDNO94850 711 aaPredicted RBP22.28■■□□□ 1.16
CLN6-205ENST00000564846 ORC2Q13416 577 aaPredicted RBP22.28■■□□□ 1.16
CLN6-205ENST00000564846 NEK8Q86SG6 692 aa22.28■■□□□ 1.16
CLN6-205ENST00000564846 AMNQ9BXJ7 453 aa22.28■■□□□ 1.16
CLN6-205ENST00000564846 PCDHA1Q9Y5I3 950 aa22.28■■□□□ 1.16
CLN6-205ENST00000564846 LAD1O00515 517 aa22.27■■□□□ 1.16
CLN6-205ENST00000564846 PLA2G6O60733 806 aa22.27■■□□□ 1.16
CLN6-205ENST00000564846 HIRAP54198 1017 aaPredicted RBP22.27■■□□□ 1.16
CLN6-205ENST00000564846 KIAA1755Q5JYT7 1200 aa22.27■■□□□ 1.16
CLN6-205ENST00000564846 JAKMIP3Q5VZ66 844 aa22.27■■□□□ 1.16
CLN6-205ENST00000564846 ELOA2Q8IYF1 753 aaPredicted RBP22.27■■□□□ 1.16
CLN6-205ENST00000564846 C4orf32Q8N8J7 132 aa22.27■■□□□ 1.16
CLN6-205ENST00000564846 PSTPIP2Q9H939 334 aa22.27■■□□□ 1.16
CLN6-205ENST00000564846 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.27■■□□□ 1.16
CLN6-205ENST00000564846 PRR12Q9ULL5 1215 aa22.27■■□□□ 1.16
CLN6-205ENST00000564846 PITPNM2Q9BZ72 1349 aa22.27■■□□□ 1.16
CLN6-205ENST00000564846 CAVIN2O95810 425 aa22.27■■□□□ 1.16
CLN6-205ENST00000564846 TRAF1Q13077 416 aa22.27■■□□□ 1.16
CLN6-205ENST00000564846 UVSSAQ2YD98 709 aa22.27■■□□□ 1.16
CLN6-205ENST00000564846 SPECC1Q5M775 1068 aa22.27■■□□□ 1.16
CLN6-205ENST00000564846 FAM83BQ5T0W9 1011 aa22.27■■□□□ 1.16
CLN6-205ENST00000564846 C9orf131Q5VYM1 1079 aa22.27■■□□□ 1.16
CLN6-205ENST00000564846 CHURC1Q8WUH1 139 aa22.27■■□□□ 1.16
CLN6-205ENST00000564846 ADARB2Q9NS39 739 aaKnown RBP22.27■■□□□ 1.16
CLN6-205ENST00000564846 CLK2P49760 499 aaKnown RBP22.26■■□□□ 1.15
CLN6-205ENST00000564846 ILDR2Q71H61 639 aa22.26■■□□□ 1.15
CLN6-205ENST00000564846 FBXO11Q86XK2 927 aa22.26■■□□□ 1.15
CLN6-205ENST00000564846 TBCKQ8TEA7 893 aa22.26■■□□□ 1.15
CLN6-205ENST00000564846 FEZ1Q99689 392 aa22.26■■□□□ 1.15
CLN6-205ENST00000564846 ZNF112Q9UJU3 913 aa22.26■■□□□ 1.15
CLN6-205ENST00000564846 VWA3AA6NCI4 1184 aa22.25■■□□□ 1.15
CLN6-205ENST00000564846 FAM160B2Q86V87 743 aa22.25■■□□□ 1.15
CLN6-205ENST00000564846 GLIS2Q9BZE0 524 aaPredicted RBP22.25■■□□□ 1.15
CLN6-205ENST00000564846 TMEM260Q9NX78 707 aa22.25■■□□□ 1.15
CLN6-205ENST00000564846 KIAA1468Q9P260 1216 aa22.25■■□□□ 1.15
CLN6-205ENST00000564846 LETM2Q2VYF4 491 aa22.25■■□□□ 1.15
CLN6-205ENST00000564846 KRBA2Q6ZNG9 492 aa22.25■■□□□ 1.15
CLN6-205ENST00000564846 CNNM3Q8NE01 707 aa22.25■■□□□ 1.15
CLN6-205ENST00000564846 LPAR1Q92633 364 aa22.25■■□□□ 1.15
CLN6-205ENST00000564846 KIAA1683Q9H0B3 1180 aa22.25■■□□□ 1.15
CLN6-205ENST00000564846 FEM1BQ9UK73 627 aa22.25■■□□□ 1.15
CLN6-205ENST00000564846 CCNT1O60563 726 aaKnown RBP22.24■■□□□ 1.15
CLN6-205ENST00000564846 LONP1P36776 959 aaKnown RBP22.24■■□□□ 1.15
CLN6-205ENST00000564846 PRPHP41219 470 aa22.24■■□□□ 1.15
CLN6-205ENST00000564846 ZYXQ15942 572 aaKnown RBP22.24■■□□□ 1.15
CLN6-205ENST00000564846 STX1AQ16623 288 aa22.24■■□□□ 1.15
CLN6-205ENST00000564846 LONRF3Q496Y0 759 aa22.24■■□□□ 1.15
CLN6-205ENST00000564846 MCTP2Q6DN12 878 aa22.24■■□□□ 1.15
CLN6-205ENST00000564846 FAM200AQ8TCP9 573 aa22.24■■□□□ 1.15
CLN6-205ENST00000564846 HOOK1Q9UJC3 728 aaKnown RBP22.24■■□□□ 1.15
CLN6-205ENST00000564846 SUPT20HL1Q3ZLR7 823 aa22.23■■□□□ 1.15
CLN6-205ENST00000564846 ANO6Q4KMQ2 910 aa22.23■■□□□ 1.15
CLN6-205ENST00000564846 DTHD1Q6ZMT9 781 aa22.23■■□□□ 1.15
CLN6-205ENST00000564846 CCDC84Q86UT8 332 aaPredicted RBP22.23■■□□□ 1.15
CLN6-205ENST00000564846 TEX2Q8IWB9 1127 aa22.23■■□□□ 1.15
CLN6-205ENST00000564846 SCYL3Q8IZE3 742 aa22.23■■□□□ 1.15
CLN6-205ENST00000564846 ATAD5Q96QE3 1844 aa22.23■■□□□ 1.15
CLN6-205ENST00000564846 POLR2DO15514 142 aaKnown RBP22.22■■□□□ 1.15
CLN6-205ENST00000564846 INPP5BP32019 993 aa22.22■■□□□ 1.15
CLN6-205ENST00000564846 UBE2SQ16763 222 aa22.22■■□□□ 1.15
CLN6-205ENST00000564846 KANK3Q6NY19 840 aa22.22■■□□□ 1.15
CLN6-205ENST00000564846 USP49Q70CQ1 688 aa22.22■■□□□ 1.15
CLN6-205ENST00000564846 SYMPKQ92797 1274 aaKnown RBP22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms