RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 CAVIN4Q5BKX8 364 aa3.77□□□□□ -1.81
CHD9-213ENST00000564845 SAMSN1Q9NSI8 373 aaKnown RBP3.77□□□□□ -1.81
CHD9-213ENST00000564845 FAM205AQ6ZU69 1335 aa3.77□□□□□ -1.81
CHD9-213ENST00000564845 ANKRD62A6NC57 917 aa3.77□□□□□ -1.81
CHD9-213ENST00000564845 CHMP2AO43633 222 aa3.77□□□□□ -1.81
CHD9-213ENST00000564845 KINO60870 393 aaKnown RBP3.77□□□□□ -1.81
CHD9-213ENST00000564845 PCSK2P16519 638 aa3.77□□□□□ -1.81
CHD9-213ENST00000564845 CAPN2P17655 700 aa3.77□□□□□ -1.81
CHD9-213ENST00000564845 SRBD1Q8N5C6 995 aaKnown RBP3.77□□□□□ -1.81
CHD9-213ENST00000564845 NCOA7Q8NI08 942 aa3.77□□□□□ -1.81
CHD9-213ENST00000564845 NUP62CLQ9H1M0 184 aa3.77□□□□□ -1.81
CHD9-213ENST00000564845 ADAMTSL1Q8N6G6 1762 aa3.77□□□□□ -1.81
CHD9-213ENST00000564845 NRAPQ86VF7 1730 aa3.77□□□□□ -1.81
CHD9-213ENST00000564845 CSF1RP07333 972 aa3.77□□□□□ -1.81
CHD9-213ENST00000564845 KARSQ15046 597 aaKnown RBP3.77□□□□□ -1.81
CHD9-213ENST00000564845 KRT40Q6A162 431 aa3.77□□□□□ -1.81
CHD9-213ENST00000564845 CERS5Q8N5B7 392 aa3.77□□□□□ -1.81
CHD9-213ENST00000564845 IGDCC4Q8TDY8 1250 aa3.77□□□□□ -1.81
CHD9-213ENST00000564845 NAA15Q9BXJ9 866 aaKnown RBP3.77□□□□□ -1.81
CHD9-213ENST00000564845 FBXO3Q9UK99 471 aa3.77□□□□□ -1.81
CHD9-213ENST00000564845 ZNF804BA4D1E1 1349 aa3.77□□□□□ -1.81
CHD9-213ENST00000564845 USP17L15C9J2P7 530 aa3.77□□□□□ -1.81
CHD9-213ENST00000564845 USP17L13C9JLJ4 530 aa3.77□□□□□ -1.81
CHD9-213ENST00000564845 USP17L11C9JVI0 530 aa3.77□□□□□ -1.81
CHD9-213ENST00000564845 USP17L18D6R9N7 530 aa3.77□□□□□ -1.81
CHD9-213ENST00000564845 USP17L22D6RA61 530 aa3.77□□□□□ -1.81
CHD9-213ENST00000564845 USP17L17D6RBQ6 530 aa3.77□□□□□ -1.81
CHD9-213ENST00000564845 USP17L19D6RCP7 530 aa3.77□□□□□ -1.81
CHD9-213ENST00000564845 USP17L20D6RJB6 530 aa3.77□□□□□ -1.81
CHD9-213ENST00000564845 MRE11P49959 708 aa3.77□□□□□ -1.81
CHD9-213ENST00000564845 USP17L24Q0WX57 530 aa3.77□□□□□ -1.81
CHD9-213ENST00000564845 RESTQ13127 1097 aa3.77□□□□□ -1.81
CHD9-213ENST00000564845 RRP1BQ14684 758 aaKnown RBP3.77□□□□□ -1.81
CHD9-213ENST00000564845 USP17L6PQ6QN14 398 aa3.77□□□□□ -1.81
CHD9-213ENST00000564845 CSRNP2Q9H175 543 aa3.77□□□□□ -1.81
CHD9-213ENST00000564845 TRIM10Q9UDY6 481 aa3.77□□□□□ -1.81
CHD9-213ENST00000564845 GOLGA8JA6NMD2 632 aa3.76□□□□□ -1.81
CHD9-213ENST00000564845 NFKBIAP25963 317 aa3.76□□□□□ -1.81
CHD9-213ENST00000564845 TM4SF1P30408 202 aa3.76□□□□□ -1.81
CHD9-213ENST00000564845 TOB1P50616 345 aaPredicted RBP3.76□□□□□ -1.81
CHD9-213ENST00000564845 IRX4P78413 519 aa3.76□□□□□ -1.81
CHD9-213ENST00000564845 SHC4Q6S5L8 630 aa3.76□□□□□ -1.81
CHD9-213ENST00000564845 CCDC73Q6ZRK6 1079 aa3.76□□□□□ -1.81
CHD9-213ENST00000564845 FOXP4Q8IVH2 680 aaPredicted RBP3.76□□□□□ -1.81
CHD9-213ENST00000564845 CCAR2Q8N163 923 aaKnown RBP3.76□□□□□ -1.81
CHD9-213ENST00000564845 R3HDMLQ9H3Y0 253 aa3.76□□□□□ -1.81
CHD9-213ENST00000564845 WDR33Q9C0J8 1336 aaKnown RBP3.76□□□□□ -1.81
CHD9-213ENST00000564845 hCG_1984214I3L0E3 225 aa3.76□□□□□ -1.81
CHD9-213ENST00000564845 CALCAP01258 141 aa3.76□□□□□ -1.81
CHD9-213ENST00000564845 BTDP43251 543 aa3.76□□□□□ -1.81
CHD9-213ENST00000564845 MNAT1P51948 309 aa3.76□□□□□ -1.81
CHD9-213ENST00000564845 SPATS2Q86XZ4 545 aaKnown RBP3.76□□□□□ -1.81
CHD9-213ENST00000564845 CNNM2Q9H8M5 875 aa3.76□□□□□ -1.81
CHD9-213ENST00000564845 BAZ2AQ9UIF9 1905 aaKnown RBP3.76□□□□□ -1.81
CHD9-213ENST00000564845 ECE1P42892 770 aa3.76□□□□□ -1.81
CHD9-213ENST00000564845 GSDMDP57764 484 aa3.76□□□□□ -1.81
CHD9-213ENST00000564845 RASSF7Q02833 373 aa3.76□□□□□ -1.81
CHD9-213ENST00000564845 IL17AQ16552 155 aa3.76□□□□□ -1.81
CHD9-213ENST00000564845 LETM2Q2VYF4 491 aa3.76□□□□□ -1.81
CHD9-213ENST00000564845 CCDC174Q6PII3 467 aa3.76□□□□□ -1.81
CHD9-213ENST00000564845 DPP8Q6V1X1 898 aaPredicted RBP3.76□□□□□ -1.81
CHD9-213ENST00000564845 MICALCLQ6ZW33 695 aa3.76□□□□□ -1.81
CHD9-213ENST00000564845 SAMD7Q7Z3H4 446 aa3.76□□□□□ -1.81
CHD9-213ENST00000564845 CCDC148Q8NFR7 591 aa3.76□□□□□ -1.81
CHD9-213ENST00000564845 APPBP2Q92624 585 aa3.76□□□□□ -1.81
CHD9-213ENST00000564845 ZBTB10Q96DT7 871 aa3.76□□□□□ -1.81
CHD9-213ENST00000564845 PFDN4Q9NQP4 134 aa3.76□□□□□ -1.81
CHD9-213ENST00000564845 SERTAD1Q9UHV2 236 aa3.76□□□□□ -1.81
CHD9-213ENST00000564845 MAP3K12Q12852 859 aa3.76□□□□□ -1.81
CHD9-213ENST00000564845 MB21D2Q8IYB1 491 aaPredicted RBP3.76□□□□□ -1.81
CHD9-213ENST00000564845 NUCKS1Q9H1E3 243 aaKnown RBP3.76□□□□□ -1.81
CHD9-213ENST00000564845 RABEP2Q9H5N1 569 aa3.76□□□□□ -1.81
CHD9-213ENST00000564845 TTF2Q9UNY4 1162 aaKnown RBP3.76□□□□□ -1.81
CHD9-213ENST00000564845 KRT18P05783 430 aaKnown RBP3.76□□□□□ -1.81
CHD9-213ENST00000564845 KIF5BP33176 963 aa3.76□□□□□ -1.81
CHD9-213ENST00000564845 STAT3P40763 770 aa3.76□□□□□ -1.81
CHD9-213ENST00000564845 SLC35G1Q2M3R5 365 aa3.76□□□□□ -1.81
CHD9-213ENST00000564845 TSGA10IPQ3SY00 556 aa3.76□□□□□ -1.81
CHD9-213ENST00000564845 LRRC15Q8TF66 581 aa3.76□□□□□ -1.81
CHD9-213ENST00000564845 NAP1L3Q99457 506 aaPredicted RBP3.76□□□□□ -1.81
CHD9-213ENST00000564845 ZSCAN16Q9H4T2 348 aaPredicted RBP3.76□□□□□ -1.81
CHD9-213ENST00000564845 SLTMQ9NWH9 1034 aaKnown RBP eCLIP3.76□□□□□ -1.814e-10■■■■□ 20.7
CHD9-213ENST00000564845 BCAP29Q9UHQ4 241 aa3.76□□□□□ -1.81
CHD9-213ENST00000564845 SLU7O95391 586 aaKnown RBP3.76□□□□□ -1.81
CHD9-213ENST00000564845 IARSP41252 1262 aaKnown RBP3.76□□□□□ -1.81
CHD9-213ENST00000564845 TYRO3Q06418 890 aa3.76□□□□□ -1.81
CHD9-213ENST00000564845 INF2Q27J81 1249 aa3.76□□□□□ -1.81
CHD9-213ENST00000564845 CDC5LQ99459 802 aaKnown RBP3.76□□□□□ -1.81
CHD9-213ENST00000564845 ZBTB43O43298 467 aa3.76□□□□□ -1.81
CHD9-213ENST00000564845 SSBP05455 408 aaKnown RBP eCLIP3.76□□□□□ -1.81
CHD9-213ENST00000564845 EXOSC10Q01780 885 aaKnown RBP3.76□□□□□ -1.81
CHD9-213ENST00000564845 WTAPQ15007 396 aa3.76□□□□□ -1.81
CHD9-213ENST00000564845 ARMC9Q7Z3E5 817 aa3.76□□□□□ -1.81
CHD9-213ENST00000564845 DIS3L2Q8IYB7 885 aaKnown RBP3.76□□□□□ -1.81
CHD9-213ENST00000564845 GIMAP7Q8NHV1 300 aa3.76□□□□□ -1.81
CHD9-213ENST00000564845 NSUN4Q96CB9 384 aaKnown RBP3.76□□□□□ -1.81
CHD9-213ENST00000564845 CFAP57Q96MR6 1250 aa3.76□□□□□ -1.81
CHD9-213ENST00000564845 PPP1R12CQ9BZL4 782 aa3.76□□□□□ -1.81
CHD9-213ENST00000564845 NYXQ9GZU5 481 aa3.76□□□□□ -1.81
CHD9-213ENST00000564845 VPS16Q9H269 839 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms