RNA–Protein interactions for RNA: ENST00000564814.1

GINS3-205, Transcript of GINS complex subunit 3, humanhuman

TSL 4

Gene GINS3, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-205ENST00000564814 RRP36Q96EU6 259 aaKnown RBP8.66□□□□□ -1.02
GINS3-205ENST00000564814 OTUD5Q96G74 571 aa8.66□□□□□ -1.02
GINS3-205ENST00000564814 GLT8D2Q9H1C3 349 aa8.66□□□□□ -1.02
GINS3-205ENST00000564814 ELP3Q9H9T3 547 aa8.66□□□□□ -1.02
GINS3-205ENST00000564814 JMJD4Q9H9V9 463 aa8.66□□□□□ -1.02
GINS3-205ENST00000564814 SLC38A10Q9HBR0 1119 aa8.66□□□□□ -1.02
GINS3-205ENST00000564814 BARHL2Q9NY43 387 aa8.66□□□□□ -1.02
GINS3-205ENST00000564814 HOXC10Q9NYD6 342 aa8.66□□□□□ -1.02
GINS3-205ENST00000564814 DAXXQ9UER7 740 aaPredicted RBP8.66□□□□□ -1.02
GINS3-205ENST00000564814 CASP8AP2Q9UKL3 1982 aa8.66□□□□□ -1.02
GINS3-205ENST00000564814 COL11A1P12107 1806 aaPredicted RBP8.66□□□□□ -1.02
GINS3-205ENST00000564814 RBBP6Q7Z6E9 1792 aaKnown RBP8.66□□□□□ -1.02
GINS3-205ENST00000564814 FAM155AB1AL88 458 aaPredicted RBP8.65□□□□□ -1.02
GINS3-205ENST00000564814 TMEM232C9JQI7 657 aa8.65□□□□□ -1.02
GINS3-205ENST00000564814 BRD1O95696 1058 aa8.65□□□□□ -1.02
GINS3-205ENST00000564814 SYT1P21579 422 aa8.65□□□□□ -1.02
GINS3-205ENST00000564814 AKAP17AQ02040 695 aaKnown RBP8.65□□□□□ -1.02
GINS3-205ENST00000564814 COG2Q14746 738 aa8.65□□□□□ -1.02
GINS3-205ENST00000564814 NPY5RQ15761 445 aa8.65□□□□□ -1.02
GINS3-205ENST00000564814 CCDC96Q2M329 555 aa8.65□□□□□ -1.02
GINS3-205ENST00000564814 MCTP2Q6DN12 878 aa8.65□□□□□ -1.02
GINS3-205ENST00000564814 TTBK2Q6IQ55 1244 aa8.65□□□□□ -1.02
GINS3-205ENST00000564814 GPAT2Q6NUI2 795 aa8.65□□□□□ -1.02
GINS3-205ENST00000564814 CLEC17AQ6ZS10 378 aa8.65□□□□□ -1.02
GINS3-205ENST00000564814 KCTD1Q719H9 257 aa8.65□□□□□ -1.02
GINS3-205ENST00000564814 RASGRP2Q7LDG7 609 aa8.65□□□□□ -1.02
GINS3-205ENST00000564814 FAM184AQ8NB25 1140 aa8.65□□□□□ -1.02
GINS3-205ENST00000564814 CCDC148Q8NFR7 591 aa8.65□□□□□ -1.02
GINS3-205ENST00000564814 CCDC12Q8WUD4 166 aaPredicted RBP8.65□□□□□ -1.02
GINS3-205ENST00000564814 SLF1Q9BQI6 1058 aa8.65□□□□□ -1.02
GINS3-205ENST00000564814 PHF20Q9BVI0 1012 aa8.65□□□□□ -1.02
GINS3-205ENST00000564814 CFHR5Q9BXR6 569 aa8.65□□□□□ -1.02
GINS3-205ENST00000564814 SLC26A6Q9BXS9 759 aa8.65□□□□□ -1.02
GINS3-205ENST00000564814 ZMYND12Q9H0C1 365 aa8.65□□□□□ -1.02
GINS3-205ENST00000564814 RPAP3Q9H6T3 665 aaPredicted RBP8.65□□□□□ -1.02
GINS3-205ENST00000564814 MAP3K20Q9NYL2 800 aaKnown RBP8.65□□□□□ -1.02
GINS3-205ENST00000564814 PNMA3Q9UL41 463 aa8.65□□□□□ -1.02
GINS3-205ENST00000564814 PRR12Q9ULL5 1215 aa8.65□□□□□ -1.02
GINS3-205ENST00000564814 MYH15Q9Y2K3 1946 aa8.64□□□□□ -1.03
GINS3-205ENST00000564814 ZNF536O15090 1300 aa8.64□□□□□ -1.03
GINS3-205ENST00000564814 FRMPD2Q68DX3 1309 aaPredicted RBP8.64□□□□□ -1.03
GINS3-205ENST00000564814 SPDYE16A6NNV3 312 aaPredicted RBP8.64□□□□□ -1.03
GINS3-205ENST00000564814 M0R2N6 131 aa8.64□□□□□ -1.03
GINS3-205ENST00000564814 VWA5AO00534 786 aa8.64□□□□□ -1.03
GINS3-205ENST00000564814 STX6O43752 255 aa8.64□□□□□ -1.03
GINS3-205ENST00000564814 MMP1P03956 469 aa8.64□□□□□ -1.03
GINS3-205ENST00000564814 ICAM1P05362 532 aa8.64□□□□□ -1.03
GINS3-205ENST00000564814 GOLGA8HP0CJ92 632 aa8.64□□□□□ -1.03
GINS3-205ENST00000564814 U2AF2P26368 475 aaKnown RBP eCLIP8.64□□□□□ -1.03
GINS3-205ENST00000564814 CALML3P27482 149 aa8.64□□□□□ -1.03
GINS3-205ENST00000564814 COPB2P35606 906 aa8.64□□□□□ -1.03
GINS3-205ENST00000564814 MAP2K2P36507 400 aa8.64□□□□□ -1.03
GINS3-205ENST00000564814 TM4SF4P48230 202 aa8.64□□□□□ -1.03
GINS3-205ENST00000564814 TKFCQ3LXA3 575 aa8.64□□□□□ -1.03
GINS3-205ENST00000564814 RAB11FIP4Q86YS3 637 aa8.64□□□□□ -1.03
GINS3-205ENST00000564814 CCDC144CPQ8IYA2 1237 aa8.64□□□□□ -1.03
GINS3-205ENST00000564814 SPICE1Q8N0Z3 855 aa8.64□□□□□ -1.03
GINS3-205ENST00000564814 PHKBQ93100 1093 aa8.64□□□□□ -1.03
GINS3-205ENST00000564814 ALG1Q9BT22 464 aa8.64□□□□□ -1.03
GINS3-205ENST00000564814 AMNQ9BXJ7 453 aa8.64□□□□□ -1.03
GINS3-205ENST00000564814 ZSCAN16Q9H4T2 348 aaPredicted RBP8.64□□□□□ -1.03
GINS3-205ENST00000564814 CHMP5Q9NZZ3 219 aa8.64□□□□□ -1.03
GINS3-205ENST00000564814 SEC63Q9UGP8 760 aaKnown RBP8.64□□□□□ -1.03
GINS3-205ENST00000564814 ZNF214Q9UL59 606 aaPredicted RBP8.64□□□□□ -1.03
GINS3-205ENST00000564814 NAP1L2Q9ULW6 460 aaPredicted RBP8.64□□□□□ -1.03
GINS3-205ENST00000564814 MORC2Q9Y6X9 1032 aaPredicted RBP8.64□□□□□ -1.03
GINS3-205ENST00000564814 V9GY48 417 aaPredicted RBP8.64□□□□□ -1.03
GINS3-205ENST00000564814 STXBP3O00186 592 aa8.63□□□□□ -1.03
GINS3-205ENST00000564814 PIK3CDO00329 1044 aa8.63□□□□□ -1.03
GINS3-205ENST00000564814 FLOT1O75955 427 aa8.63□□□□□ -1.03
GINS3-205ENST00000564814 GNA11P29992 359 aa8.63□□□□□ -1.03
GINS3-205ENST00000564814 NOGQ13253 232 aa8.63□□□□□ -1.03
GINS3-205ENST00000564814 CDC37Q16543 378 aaPredicted RBP8.63□□□□□ -1.03
GINS3-205ENST00000564814 QRICH1Q2TAL8 776 aa8.63□□□□□ -1.03
GINS3-205ENST00000564814 LARP1BQ659C4 914 aaKnown RBP8.63□□□□□ -1.03
GINS3-205ENST00000564814 WWC2Q6AWC2 1192 aa8.63□□□□□ -1.03
GINS3-205ENST00000564814 ATL3Q6DD88 541 aa8.63□□□□□ -1.03
GINS3-205ENST00000564814 BRAPQ7Z569 592 aa8.63□□□□□ -1.03
GINS3-205ENST00000564814 BRI3BPQ8WY22 251 aa8.63□□□□□ -1.03
GINS3-205ENST00000564814 SHISA4Q96DD7 197 aa8.63□□□□□ -1.03
GINS3-205ENST00000564814 C8orf76Q96K31 380 aa8.63□□□□□ -1.03
GINS3-205ENST00000564814 PIGSQ96S52 555 aa8.63□□□□□ -1.03
GINS3-205ENST00000564814 ZIC5Q96T25 663 aa8.63□□□□□ -1.03
GINS3-205ENST00000564814 NUP88Q99567 741 aaPredicted RBP8.63□□□□□ -1.03
GINS3-205ENST00000564814 UBA5Q9GZZ9 404 aa8.63□□□□□ -1.03
GINS3-205ENST00000564814 FOXP1Q9H334 677 aaPredicted RBP8.63□□□□□ -1.03
GINS3-205ENST00000564814 GPCPD1Q9NPB8 672 aa8.63□□□□□ -1.03
GINS3-205ENST00000564814 MTMR6Q9Y217 621 aa8.63□□□□□ -1.03
GINS3-205ENST00000564814 RABGAP1Q9Y3P9 1069 aa8.63□□□□□ -1.03
GINS3-205ENST00000564814 ZNF236Q9UL36 1845 aa8.63□□□□□ -1.03
GINS3-205ENST00000564814 SMCHD1A6NHR9 2005 aa8.63□□□□□ -1.03
GINS3-205ENST00000564814 ABCB11O95342 1321 aa8.62□□□□□ -1.03
GINS3-205ENST00000564814 ADGRA2Q96PE1 1338 aa8.62□□□□□ -1.03
GINS3-205ENST00000564814 CCL15-CCL14A0A0B4J2E2 113 aa8.62□□□□□ -1.03
GINS3-205ENST00000564814 BTBD19C9JJ37 291 aa8.62□□□□□ -1.03
GINS3-205ENST00000564814 PPP1R11O60927 126 aaPredicted RBP8.62□□□□□ -1.03
GINS3-205ENST00000564814 ZSCAN22P10073 491 aaPredicted RBP8.62□□□□□ -1.03
GINS3-205ENST00000564814 OSBPP22059 807 aa8.62□□□□□ -1.03
GINS3-205ENST00000564814 SLC16A2P36021 539 aa8.62□□□□□ -1.03
GINS3-205ENST00000564814 GCLCP48506 637 aaPredicted RBP8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms