RNA–Protein interactions for RNA: ENST00000564628.1

NME3-207, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 811 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-207ENST00000564628 TOX2Q96NM4 488 aa22.38■■□□□ 1.17
NME3-207ENST00000564628 MKNK2Q9HBH9 465 aa22.38■■□□□ 1.17
NME3-207ENST00000564628 IGKV6D-41A0A0C4DH26 115 aa22.37■■□□□ 1.17
NME3-207ENST00000564628 ATP2A1O14983 1001 aa22.37■■□□□ 1.17
NME3-207ENST00000564628 FGRP09769 529 aa22.37■■□□□ 1.17
NME3-207ENST00000564628 RAG1P15918 1043 aa22.37■■□□□ 1.17
NME3-207ENST00000564628 PDE4BQ07343 736 aa22.37■■□□□ 1.17
NME3-207ENST00000564628 STK11IPQ8N1F8 1099 aa22.37■■□□□ 1.17
NME3-207ENST00000564628 TTYH1Q9H313 450 aaPredicted RBP22.37■■□□□ 1.17
NME3-207ENST00000564628 DNAJC25-GNG10A0A024R161 153 aa22.36■■□□□ 1.17
NME3-207ENST00000564628 MOXD2PA6NHM9 499 aa22.36■■□□□ 1.17
NME3-207ENST00000564628 F5H6K3 240 aa22.36■■□□□ 1.17
NME3-207ENST00000564628 PQBP1O60828 265 aaKnown RBP22.36■■□□□ 1.17
NME3-207ENST00000564628 PRDM1O75626 825 aa22.36■■□□□ 1.17
NME3-207ENST00000564628 KLRC3Q07444 240 aa22.36■■□□□ 1.17
NME3-207ENST00000564628 BMP2KLQ5H9B9 411 aa22.36■■□□□ 1.17
NME3-207ENST00000564628 SNRNP48Q6IEG0 339 aaKnown RBP22.36■■□□□ 1.17
NME3-207ENST00000564628 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.36■■□□□ 1.17
NME3-207ENST00000564628 ZNF467Q7Z7K2 595 aaPredicted RBP22.36■■□□□ 1.17
NME3-207ENST00000564628 PRPF38AQ8NAV1 312 aaKnown RBP22.36■■□□□ 1.17
NME3-207ENST00000564628 MAFAQ8NHW3 353 aaPredicted RBP22.36■■□□□ 1.17
NME3-207ENST00000564628 NUP133Q8WUM0 1156 aa22.36■■□□□ 1.17
NME3-207ENST00000564628 RNPC3Q96LT9 517 aaKnown RBP22.36■■□□□ 1.17
NME3-207ENST00000564628 DSCC1Q9BVC3 393 aa22.36■■□□□ 1.17
NME3-207ENST00000564628 FAM184BQ9ULE4 1060 aa22.36■■□□□ 1.17
NME3-207ENST00000564628 SYNRGQ9UMZ2 1314 aa22.35■■□□□ 1.17
NME3-207ENST00000564628 SNAI1O95863 264 aaPredicted RBP22.35■■□□□ 1.17
NME3-207ENST00000564628 NDUFB10O96000 172 aa22.35■■□□□ 1.17
NME3-207ENST00000564628 ACLYP53396 1101 aa22.35■■□□□ 1.17
NME3-207ENST00000564628 EPHB4P54760 987 aa22.35■■□□□ 1.17
NME3-207ENST00000564628 FPGSQ05932 587 aa22.35■■□□□ 1.17
NME3-207ENST00000564628 CTDSPL2Q05D32 466 aa22.35■■□□□ 1.17
NME3-207ENST00000564628 KLHDC9Q8NEP7 349 aa22.35■■□□□ 1.17
NME3-207ENST00000564628 LENG1Q96BZ8 264 aaPredicted RBP22.35■■□□□ 1.17
NME3-207ENST00000564628 DDX11Q96FC9 970 aa22.35■■□□□ 1.17
NME3-207ENST00000564628 NUP88Q99567 741 aaPredicted RBP22.35■■□□□ 1.17
NME3-207ENST00000564628 STARD7Q9NQZ5 370 aa22.35■■□□□ 1.17
NME3-207ENST00000564628 TMEM39AQ9NV64 488 aa22.35■■□□□ 1.17
NME3-207ENST00000564628 DCDC2CA8MYV0 355 aa22.34■■□□□ 1.17
NME3-207ENST00000564628 ORC4O43929 436 aa22.34■■□□□ 1.17
NME3-207ENST00000564628 FAAP100Q0VG06 881 aa22.34■■□□□ 1.17
NME3-207ENST00000564628 ZNF444Q8N0Y2 327 aaPredicted RBP22.34■■□□□ 1.17
NME3-207ENST00000564628 NEDD1Q8NHV4 660 aa22.34■■□□□ 1.17
NME3-207ENST00000564628 SYNPO2Q9UMS6 1093 aa22.34■■□□□ 1.17
NME3-207ENST00000564628 RIPK3Q9Y572 518 aa22.34■■□□□ 1.17
NME3-207ENST00000564628 DUSP11O75319 330 aaKnown RBP22.33■■□□□ 1.17
NME3-207ENST00000564628 CST5P28325 142 aaPredicted RBP22.33■■□□□ 1.17
NME3-207ENST00000564628 CCSAPQ6IQ19 270 aaPredicted RBP22.33■■□□□ 1.17
NME3-207ENST00000564628 RUFY2Q8WXA3 655 aa22.33■■□□□ 1.17
NME3-207ENST00000564628 MYLIPQ8WY64 445 aa22.33■■□□□ 1.17
NME3-207ENST00000564628 ELP1O95163 1332 aa22.32■■□□□ 1.16
NME3-207ENST00000564628 SGSM2O43147 1006 aa22.32■■□□□ 1.16
NME3-207ENST00000564628 ZBED4O75132 1171 aa22.32■■□□□ 1.16
NME3-207ENST00000564628 MKL1Q969V6 931 aa22.32■■□□□ 1.16
NME3-207ENST00000564628 INCENPQ9NQS7 918 aa22.32■■□□□ 1.16
NME3-207ENST00000564628 ZHX1Q9UKY1 873 aaPredicted RBP22.32■■□□□ 1.16
NME3-207ENST00000564628 EYSQ5T1H1 3165 aa22.32■■□□□ 1.16
NME3-207ENST00000564628 MROH7Q68CQ1 1323 aa22.31■■□□□ 1.16
NME3-207ENST00000564628 FOSL2P15408 326 aa22.31■■□□□ 1.16
NME3-207ENST00000564628 OAZ1P54368 228 aa22.31■■□□□ 1.16
NME3-207ENST00000564628 KCNA10Q16322 511 aa22.31■■□□□ 1.16
NME3-207ENST00000564628 CEP95Q96GE4 821 aa22.31■■□□□ 1.16
NME3-207ENST00000564628 SLC38A10Q9HBR0 1119 aa22.31■■□□□ 1.16
NME3-207ENST00000564628 MTMR4Q9NYA4 1195 aa22.31■■□□□ 1.16
NME3-207ENST00000564628 CLIP2Q9UDT6 1046 aa22.31■■□□□ 1.16
NME3-207ENST00000564628 FBXO40Q9UH90 709 aa22.31■■□□□ 1.16
NME3-207ENST00000564628 CDH23Q9H251 3354 aa22.31■■□□□ 1.16
NME3-207ENST00000564628 TIMP1P01033 207 aa22.3■■□□□ 1.16
NME3-207ENST00000564628 TSPY3P0CV98 308 aa22.3■■□□□ 1.16
NME3-207ENST00000564628 TSPY8P0CW00 308 aa22.3■■□□□ 1.16
NME3-207ENST00000564628 PCP11498 1178 aaKnown RBP22.3■■□□□ 1.16
NME3-207ENST00000564628 HAND2P61296 217 aa22.3■■□□□ 1.16
NME3-207ENST00000564628 TFAP4Q01664 338 aa22.3■■□□□ 1.16
NME3-207ENST00000564628 ACVR2BQ13705 512 aa22.3■■□□□ 1.16
NME3-207ENST00000564628 TBC1D10CQ8IV04 446 aa22.3■■□□□ 1.16
NME3-207ENST00000564628 CPXCR1Q8N123 301 aa22.3■■□□□ 1.16
NME3-207ENST00000564628 PCSK9Q8NBP7 692 aaKnown RBP22.3■■□□□ 1.16
NME3-207ENST00000564628 GMCL1P1Q8NEA9 526 aa22.3■■□□□ 1.16
NME3-207ENST00000564628 CHST13Q8NET6 341 aa22.3■■□□□ 1.16
NME3-207ENST00000564628 STAG1Q8WVM7 1258 aa22.3■■□□□ 1.16
NME3-207ENST00000564628 GLT1D1Q96MS3 346 aa22.3■■□□□ 1.16
NME3-207ENST00000564628 ABHD16BQ9H3Z7 469 aa22.3■■□□□ 1.16
NME3-207ENST00000564628 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.3■■□□□ 1.16
NME3-207ENST00000564628 FEM1BQ9UK73 627 aa22.3■■□□□ 1.16
NME3-207ENST00000564628 TBX21Q9UL17 535 aa22.3■■□□□ 1.16
NME3-207ENST00000564628 CTDP1Q9Y5B0 961 aaPredicted RBP22.3■■□□□ 1.16
NME3-207ENST00000564628 HSFX4A0A1B0GTS1 333 aaPredicted RBP22.29■■□□□ 1.16
NME3-207ENST00000564628 HSFX3A0A1B0GWH4 333 aaPredicted RBP22.29■■□□□ 1.16
NME3-207ENST00000564628 AKNAD1Q5T1N1 836 aa22.29■■□□□ 1.16
NME3-207ENST00000564628 ANKRD35Q8N283 1001 aa22.29■■□□□ 1.16
NME3-207ENST00000564628 KIFC2Q96AC6 838 aa22.29■■□□□ 1.16
NME3-207ENST00000564628 UPF3AQ9H1J1 476 aaKnown RBP22.29■■□□□ 1.16
NME3-207ENST00000564628 SPC25Q9HBM1 224 aa22.29■■□□□ 1.16
NME3-207ENST00000564628 FDX1P10109 184 aa22.28■■□□□ 1.16
NME3-207ENST00000564628 NOVP48745 357 aa22.28■■□□□ 1.16
NME3-207ENST00000564628 CDK7P50613 346 aa22.28■■□□□ 1.16
NME3-207ENST00000564628 FGD4Q96M96 766 aa22.28■■□□□ 1.16
NME3-207ENST00000564628 RAVER2Q9HCJ3 691 aaKnown RBP22.28■■□□□ 1.16
NME3-207ENST00000564628 CTNNA3Q9UI47 895 aa22.28■■□□□ 1.16
NME3-207ENST00000564628 VCANP13611 3396 aa22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms