RNA–Protein interactions for RNA: ENST00000564255.5

CHD9-209, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 2,896 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-209ENST00000564255 JDP2Q8WYK2 163 aa3.55□□□□□ -1.84
CHD9-209ENST00000564255 MCMBPQ9BTE3 642 aa3.55□□□□□ -1.84
CHD9-209ENST00000564255 CHST7Q9NS84 486 aa3.55□□□□□ -1.84
CHD9-209ENST00000564255 NPFFR2Q9Y5X5 522 aa3.55□□□□□ -1.84
CHD9-209ENST00000564255 BPIP17213 487 aa3.55□□□□□ -1.84
CHD9-209ENST00000564255 ITIH2P19823 946 aa3.55□□□□□ -1.84
CHD9-209ENST00000564255 MAP4P27816 1152 aaKnown RBP3.55□□□□□ -1.84
CHD9-209ENST00000564255 NOL9Q5SY16 702 aaKnown RBP3.55□□□□□ -1.84
CHD9-209ENST00000564255 WWC2Q6AWC2 1192 aa3.55□□□□□ -1.84
CHD9-209ENST00000564255 PKN3Q6P5Z2 889 aa3.55□□□□□ -1.84
CHD9-209ENST00000564255 TMC3Q7Z5M5 1100 aa3.55□□□□□ -1.84
CHD9-209ENST00000564255 KIF18BQ86Y91 864 aa3.55□□□□□ -1.84
CHD9-209ENST00000564255 FMNL3Q8IVF7 1028 aa3.55□□□□□ -1.84
CHD9-209ENST00000564255 DTWD2Q8NBA8 298 aa3.55□□□□□ -1.84
CHD9-209ENST00000564255 ENOX1Q8TC92 643 aaKnown RBP3.55□□□□□ -1.84
CHD9-209ENST00000564255 COPS5Q92905 334 aa3.55□□□□□ -1.84
CHD9-209ENST00000564255 MYRFLQ96LU7 910 aa3.55□□□□□ -1.84
CHD9-209ENST00000564255 NACC1Q96RE7 527 aa3.55□□□□□ -1.84
CHD9-209ENST00000564255 DUSP23Q9BVJ7 150 aa3.55□□□□□ -1.84
CHD9-209ENST00000564255 CHMP4AQ9BY43 222 aa3.55□□□□□ -1.84
CHD9-209ENST00000564255 FAN1Q9Y2M0 1017 aa3.55□□□□□ -1.84
CHD9-209ENST00000564255 ASXL2Q76L83 1435 aa3.55□□□□□ -1.84
CHD9-209ENST00000564255 IGF2BP3O00425 579 aaKnown RBP eCLIP3.54□□□□□ -1.84
CHD9-209ENST00000564255 PRAMEF1O95521 474 aa3.54□□□□□ -1.84
CHD9-209ENST00000564255 APBA3O96018 575 aa3.54□□□□□ -1.84
CHD9-209ENST00000564255 GSNP06396 782 aa3.54□□□□□ -1.84
CHD9-209ENST00000564255 ZNF865P0CJ78 1059 aaPredicted RBP3.54□□□□□ -1.84
CHD9-209ENST00000564255 CPEP16870 476 aa3.54□□□□□ -1.84
CHD9-209ENST00000564255 LORP23490 312 aaPredicted RBP3.54□□□□□ -1.84
CHD9-209ENST00000564255 AMPD2Q01433 879 aa3.54□□□□□ -1.84
CHD9-209ENST00000564255 NRG1Q02297 640 aaPredicted RBP3.54□□□□□ -1.84
CHD9-209ENST00000564255 CDK5R2Q13319 367 aa3.54□□□□□ -1.84
CHD9-209ENST00000564255 CDCA2Q69YH5 1023 aaPredicted RBP3.54□□□□□ -1.84
CHD9-209ENST00000564255 RSPO2Q6UXX9 243 aaPredicted RBP3.54□□□□□ -1.84
CHD9-209ENST00000564255 RAVER1Q8IY67 606 aaKnown RBP3.54□□□□□ -1.84
CHD9-209ENST00000564255 ATL2Q8NHH9 583 aa3.54□□□□□ -1.84
CHD9-209ENST00000564255 GATA6Q92908 595 aa3.54□□□□□ -1.84
CHD9-209ENST00000564255 ZFYVE21Q9BQ24 234 aa3.54□□□□□ -1.84
CHD9-209ENST00000564255 GPR62Q9BZJ7 368 aa3.54□□□□□ -1.84
CHD9-209ENST00000564255 LGR6Q9HBX8 967 aa3.54□□□□□ -1.84
CHD9-209ENST00000564255 KCNH3Q9ULD8 1083 aa3.54□□□□□ -1.84
CHD9-209ENST00000564255 CNTNAP5Q8WYK1 1306 aa3.54□□□□□ -1.84
CHD9-209ENST00000564255 H0Y8X5 98 aa3.54□□□□□ -1.84
CHD9-209ENST00000564255 ARNTLO00327 626 aa3.54□□□□□ -1.84
CHD9-209ENST00000564255 GPR39O43194 453 aa3.54□□□□□ -1.84
CHD9-209ENST00000564255 OPA1O60313 960 aa3.54□□□□□ -1.84
CHD9-209ENST00000564255 LEFTY1O75610 366 aa3.54□□□□□ -1.84
CHD9-209ENST00000564255 GLB1P16278 677 aa3.54□□□□□ -1.84
CHD9-209ENST00000564255 FLT3P36888 993 aa3.54□□□□□ -1.84
CHD9-209ENST00000564255 INSM1Q01101 510 aaPredicted RBP3.54□□□□□ -1.84
CHD9-209ENST00000564255 RNF219Q5W0B1 726 aaPredicted RBP3.54□□□□□ -1.84
CHD9-209ENST00000564255 LHFPL2Q6ZUX7 228 aa3.54□□□□□ -1.84
CHD9-209ENST00000564255 GEMIN8Q9NWZ8 242 aaKnown RBP3.54□□□□□ -1.84
CHD9-209ENST00000564255 GPR55Q9Y2T6 319 aaPredicted RBP3.54□□□□□ -1.84
CHD9-209ENST00000564255 CAPN6Q9Y6Q1 641 aa3.54□□□□□ -1.84
CHD9-209ENST00000564255 B4E1Z4 1266 aa3.53□□□□□ -1.84
CHD9-209ENST00000564255 AQP7O14520 342 aa3.53□□□□□ -1.84
CHD9-209ENST00000564255 AURKAO14965 403 aa3.53□□□□□ -1.84
CHD9-209ENST00000564255 RASGRP1O95267 797 aa3.53□□□□□ -1.84
CHD9-209ENST00000564255 SRFP11831 508 aa3.53□□□□□ -1.84
CHD9-209ENST00000564255 CTSKP43235 329 aa3.53□□□□□ -1.84
CHD9-209ENST00000564255 KCNJ6P48051 423 aa3.53□□□□□ -1.84
CHD9-209ENST00000564255 IREB2P48200 963 aaKnown RBP3.53□□□□□ -1.84
CHD9-209ENST00000564255 GUCY2FP51841 1108 aa3.53□□□□□ -1.84
CHD9-209ENST00000564255 ZNF460Q14592 562 aa3.53□□□□□ -1.84
CHD9-209ENST00000564255 PRSS53Q2L4Q9 553 aa3.53□□□□□ -1.84
CHD9-209ENST00000564255 SFRP5Q5T4F7 317 aa3.53□□□□□ -1.84
CHD9-209ENST00000564255 USP53Q70EK8 1073 aa3.53□□□□□ -1.84
CHD9-209ENST00000564255 GIMAP7Q8NHV1 300 aa3.53□□□□□ -1.84
CHD9-209ENST00000564255 PUM2Q8TB72 1066 aaKnown RBP eCLIP3.53□□□□□ -1.84
CHD9-209ENST00000564255 LEO1Q8WVC0 666 aaPredicted RBP3.53□□□□□ -1.84
CHD9-209ENST00000564255 MEGF10Q96KG7 1140 aa3.53□□□□□ -1.84
CHD9-209ENST00000564255 ZDHHC15Q96MV8 337 aa3.53□□□□□ -1.84
CHD9-209ENST00000564255 HDAC8Q9BY41 377 aa3.53□□□□□ -1.84
CHD9-209ENST00000564255 ASPSCR1Q9BZE9 553 aa3.53□□□□□ -1.84
CHD9-209ENST00000564255 SLC52A1Q9NWF4 448 aa3.53□□□□□ -1.84
CHD9-209ENST00000564255 EID1Q9Y6B2 187 aa3.53□□□□□ -1.84
CHD9-209ENST00000564255 FAM95CA0A1B0GW59 222 aa3.53□□□□□ -1.84
CHD9-209ENST00000564255 BRINP1O60477 761 aa3.53□□□□□ -1.84
CHD9-209ENST00000564255 BMP3P12645 472 aa3.53□□□□□ -1.84
CHD9-209ENST00000564255 NAT1P18440 290 aa3.53□□□□□ -1.84
CHD9-209ENST00000564255 ECI1P42126 302 aa3.53□□□□□ -1.84
CHD9-209ENST00000564255 GPR85P60893 370 aa3.53□□□□□ -1.84
CHD9-209ENST00000564255 POU4F1Q01851 419 aa3.53□□□□□ -1.84
CHD9-209ENST00000564255 NMIQ13287 307 aaPredicted RBP3.53□□□□□ -1.84
CHD9-209ENST00000564255 NFE2Q16621 373 aaPredicted RBP3.53□□□□□ -1.84
CHD9-209ENST00000564255 PAOXQ6QHF9 649 aa3.53□□□□□ -1.84
CHD9-209ENST00000564255 UBE2R2Q712K3 238 aaPredicted RBP3.53□□□□□ -1.84
CHD9-209ENST00000564255 PIWIL2Q8TC59 973 aaKnown RBP3.53□□□□□ -1.84
CHD9-209ENST00000564255 FRS2Q8WU20 508 aa3.53□□□□□ -1.84
CHD9-209ENST00000564255 RELTQ969Z4 430 aa3.53□□□□□ -1.84
CHD9-209ENST00000564255 C8orf48Q96LL4 319 aa3.53□□□□□ -1.84
CHD9-209ENST00000564255 MAGEB10Q96LZ2 347 aaPredicted RBP3.53□□□□□ -1.84
CHD9-209ENST00000564255 DSCC1Q9BVC3 393 aa3.53□□□□□ -1.84
CHD9-209ENST00000564255 SSBP4Q9BWG4 385 aaPredicted RBP3.53□□□□□ -1.84
CHD9-209ENST00000564255 USP21Q9UK80 565 aa3.53□□□□□ -1.84
CHD9-209ENST00000564255 ARVCFO00192 962 aa3.53□□□□□ -1.85
CHD9-209ENST00000564255 ALDH1L1O75891 902 aa3.53□□□□□ -1.85
CHD9-209ENST00000564255 COL8A1P27658 744 aa3.53□□□□□ -1.85
CHD9-209ENST00000564255 NEK4P51957 841 aa3.53□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms