RNA–Protein interactions for RNA: ENST00000564247.1

CMTM3-208, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,127 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-208ENST00000564247 SPICE1Q8N0Z3 855 aa19.65■□□□□ 0.74
CMTM3-208ENST00000564247 GTF3C2Q8WUA4 911 aaPredicted RBP19.65■□□□□ 0.74
CMTM3-208ENST00000564247 ZNF333Q96JL9 665 aa19.65■□□□□ 0.74
CMTM3-208ENST00000564247 MYPNQ86TC9 1320 aa19.65■□□□□ 0.74
CMTM3-208ENST00000564247 VCAM1P19320 739 aa19.64■□□□□ 0.73
CMTM3-208ENST00000564247 HMGN5P82970 282 aaKnown RBP19.64■□□□□ 0.73
CMTM3-208ENST00000564247 MLLT1Q03111 559 aaPredicted RBP19.64■□□□□ 0.73
CMTM3-208ENST00000564247 TMTC3Q6ZXV5 915 aa19.64■□□□□ 0.73
CMTM3-208ENST00000564247 KCTD1Q719H9 257 aa19.64■□□□□ 0.73
CMTM3-208ENST00000564247 STAG2Q8N3U4 1231 aa19.64■□□□□ 0.73
CMTM3-208ENST00000564247 CCDC82Q8N4S0 544 aa19.64■□□□□ 0.73
CMTM3-208ENST00000564247 CWC22Q9HCG8 908 aaKnown RBP19.64■□□□□ 0.73
CMTM3-208ENST00000564247 KIF3AQ9Y496 699 aa19.64■□□□□ 0.73
CMTM3-208ENST00000564247 FRMPD2Q68DX3 1309 aaPredicted RBP19.64■□□□□ 0.73
CMTM3-208ENST00000564247 TNRC18O15417 2968 aaPredicted RBP19.63■□□□□ 0.73
CMTM3-208ENST00000564247 TNPO2O14787 897 aaKnown RBP19.63■□□□□ 0.73
CMTM3-208ENST00000564247 WDR46O15213 610 aaKnown RBP19.63■□□□□ 0.73
CMTM3-208ENST00000564247 PRKCZQ05513 592 aa19.63■□□□□ 0.73
CMTM3-208ENST00000564247 ST3GAL1Q11201 340 aa19.63■□□□□ 0.73
CMTM3-208ENST00000564247 IKQ13123 557 aaPredicted RBP19.63■□□□□ 0.73
CMTM3-208ENST00000564247 CATSPERGQ6ZRH7 1159 aa19.63■□□□□ 0.73
CMTM3-208ENST00000564247 FAM184AQ8NB25 1140 aa19.63■□□□□ 0.73
CMTM3-208ENST00000564247 NSUN7Q8NE18 718 aaKnown RBP19.63■□□□□ 0.73
CMTM3-208ENST00000564247 RAET1EQ8TD07 263 aa19.63■□□□□ 0.73
CMTM3-208ENST00000564247 CHURC1Q8WUH1 139 aa19.63■□□□□ 0.73
CMTM3-208ENST00000564247 KIAA0100Q14667 2235 aaKnown RBP19.63■□□□□ 0.73
CMTM3-208ENST00000564247 PTPDC1A2A3K4 754 aa19.62■□□□□ 0.73
CMTM3-208ENST00000564247 TMEM232C9JQI7 657 aa19.62■□□□□ 0.73
CMTM3-208ENST00000564247 PLEKHA8P1O95397 391 aa19.62■□□□□ 0.73
CMTM3-208ENST00000564247 NTRK3Q16288 839 aa19.62■□□□□ 0.73
CMTM3-208ENST00000564247 FAM83BQ5T0W9 1011 aa19.62■□□□□ 0.73
CMTM3-208ENST00000564247 CMTR1Q8N1G2 835 aaKnown RBP19.62■□□□□ 0.73
CMTM3-208ENST00000564247 SRBD1Q8N5C6 995 aaKnown RBP19.62■□□□□ 0.73
CMTM3-208ENST00000564247 SMARCC2Q8TAQ2 1214 aa19.62■□□□□ 0.73
CMTM3-208ENST00000564247 COA7Q96BR5 231 aa19.62■□□□□ 0.73
CMTM3-208ENST00000564247 NUP88Q99567 741 aaPredicted RBP19.62■□□□□ 0.73
CMTM3-208ENST00000564247 SLC26A6Q9BXS9 759 aa19.62■□□□□ 0.73
CMTM3-208ENST00000564247 RBM27Q9P2N5 1060 aaKnown RBP19.62■□□□□ 0.73
CMTM3-208ENST00000564247 RBPJLQ9UBG7 517 aa19.62■□□□□ 0.73
CMTM3-208ENST00000564247 FEM1BQ9UK73 627 aa19.62■□□□□ 0.73
CMTM3-208ENST00000564247 CTDNEP1O95476 244 aa19.61■□□□□ 0.73
CMTM3-208ENST00000564247 GJB2P29033 226 aa19.61■□□□□ 0.73
CMTM3-208ENST00000564247 KIAA1755Q5JYT7 1200 aa19.61■□□□□ 0.73
CMTM3-208ENST00000564247 FAM160B2Q86V87 743 aa19.61■□□□□ 0.73
CMTM3-208ENST00000564247 GPRC5AQ8NFJ5 357 aa19.61■□□□□ 0.73
CMTM3-208ENST00000564247 SH3TC2Q8TF17 1288 aa19.61■□□□□ 0.73
CMTM3-208ENST00000564247 WASF1Q92558 559 aa19.61■□□□□ 0.73
CMTM3-208ENST00000564247 PHKBQ93100 1093 aa19.61■□□□□ 0.73
CMTM3-208ENST00000564247 DDX11Q96FC9 970 aa19.61■□□□□ 0.73
CMTM3-208ENST00000564247 SPZ1Q9BXG8 430 aa19.61■□□□□ 0.73
CMTM3-208ENST00000564247 RNF26Q9BY78 433 aaPredicted RBP19.61■□□□□ 0.73
CMTM3-208ENST00000564247 UBA5Q9GZZ9 404 aa19.61■□□□□ 0.73
CMTM3-208ENST00000564247 RPAP3Q9H6T3 665 aaPredicted RBP19.61■□□□□ 0.73
CMTM3-208ENST00000564247 VAT1LQ9HCJ6 419 aa19.61■□□□□ 0.73
CMTM3-208ENST00000564247 TXNRD2Q9NNW7 524 aa19.61■□□□□ 0.73
CMTM3-208ENST00000564247 ORC3Q9UBD5 711 aaPredicted RBP19.61■□□□□ 0.73
CMTM3-208ENST00000564247 GABRQQ9UN88 632 aa19.61■□□□□ 0.73
CMTM3-208ENST00000564247 V9GY48 417 aaPredicted RBP19.61■□□□□ 0.73
CMTM3-208ENST00000564247 PRPF3O43395 683 aaKnown RBP19.6■□□□□ 0.73
CMTM3-208ENST00000564247 JAK2O60674 1132 aa19.6■□□□□ 0.73
CMTM3-208ENST00000564247 PLA2G6O60733 806 aa19.6■□□□□ 0.73
CMTM3-208ENST00000564247 GRK4P32298 578 aa19.6■□□□□ 0.73
CMTM3-208ENST00000564247 FLT3LGP49771 235 aa19.6■□□□□ 0.73
CMTM3-208ENST00000564247 STAT2P52630 851 aa19.6■□□□□ 0.73
CMTM3-208ENST00000564247 TTBK2Q6IQ55 1244 aa19.6■□□□□ 0.73
CMTM3-208ENST00000564247 POTEEQ6S8J3 1075 aa19.6■□□□□ 0.73
CMTM3-208ENST00000564247 LBX2Q6XYB7 198 aa19.6■□□□□ 0.73
CMTM3-208ENST00000564247 RASGRP2Q7LDG7 609 aa19.6■□□□□ 0.73
CMTM3-208ENST00000564247 RRP36Q96EU6 259 aaKnown RBP19.6■□□□□ 0.73
CMTM3-208ENST00000564247 BAZ2BQ9UIF8 2168 aaKnown RBP19.6■□□□□ 0.73
CMTM3-208ENST00000564247 RLFQ13129 1914 aa19.59■□□□□ 0.73
CMTM3-208ENST00000564247 STK36Q9NRP7 1315 aa19.59■□□□□ 0.73
CMTM3-208ENST00000564247 DEXIO95424 95 aa19.59■□□□□ 0.73
CMTM3-208ENST00000564247 PDCP20941 246 aa19.59■□□□□ 0.73
CMTM3-208ENST00000564247 ERVK-9P63128 1117 aa19.59■□□□□ 0.73
CMTM3-208ENST00000564247 ERVK-24P63145 666 aa19.59■□□□□ 0.73
CMTM3-208ENST00000564247 IRF5Q13568 498 aa19.59■□□□□ 0.73
CMTM3-208ENST00000564247 BTNL9Q6UXG8 535 aa19.59■□□□□ 0.73
CMTM3-208ENST00000564247 SLAIN1Q8ND83 568 aa19.59■□□□□ 0.73
CMTM3-208ENST00000564247 TANGO6Q9C0B7 1094 aa19.59■□□□□ 0.73
CMTM3-208ENST00000564247 RIOX1Q9H6W3 641 aa19.59■□□□□ 0.73
CMTM3-208ENST00000564247 SEC63Q9UGP8 760 aaKnown RBP19.59■□□□□ 0.73
CMTM3-208ENST00000564247 RABGAP1Q9Y3P9 1069 aa19.59■□□□□ 0.73
CMTM3-208ENST00000564247 MKI67P46013 3256 aaKnown RBP19.59■□□□□ 0.73
CMTM3-208ENST00000564247 POTEFA5A3E0 1075 aa19.58■□□□□ 0.72
CMTM3-208ENST00000564247 PEX10O60683 326 aa19.58■□□□□ 0.72
CMTM3-208ENST00000564247 PPFIA3O75145 1194 aa19.58■□□□□ 0.72
CMTM3-208ENST00000564247 SLC16A2P36021 539 aa19.58■□□□□ 0.72
CMTM3-208ENST00000564247 FUT2Q10981 343 aa19.58■□□□□ 0.72
CMTM3-208ENST00000564247 SYDE2Q5VT97 1194 aa19.58■□□□□ 0.72
CMTM3-208ENST00000564247 ADGRF4Q8IZF3 695 aa19.58■□□□□ 0.72
CMTM3-208ENST00000564247 PXYLP1Q8TE99 480 aa19.58■□□□□ 0.72
CMTM3-208ENST00000564247 PAGR1Q9BTK6 254 aa19.58■□□□□ 0.72
CMTM3-208ENST00000564247 TMEM106CQ9BVX2 250 aa19.58■□□□□ 0.72
CMTM3-208ENST00000564247 PLXNB2O15031 1838 aa19.58■□□□□ 0.72
CMTM3-208ENST00000564247 CNTNAP5Q8WYK1 1306 aa19.57■□□□□ 0.72
CMTM3-208ENST00000564247 SPDYE16A6NNV3 312 aaPredicted RBP19.57■□□□□ 0.72
CMTM3-208ENST00000564247 CNMDO75829 334 aa19.57■□□□□ 0.72
CMTM3-208ENST00000564247 PDIA4P13667 645 aaKnown RBP19.57■□□□□ 0.72
CMTM3-208ENST00000564247 MAPK4P31152 587 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms