RNA–Protein interactions for RNA: ENST00000563869.1

SYNGR3-203, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 860 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-203ENST00000563869 TANGO6Q9C0B7 1094 aa22.03■■□□□ 1.12
SYNGR3-203ENST00000563869 LY9Q9HBG7 655 aa22.03■■□□□ 1.12
SYNGR3-203ENST00000563869 PARP14Q460N5 1801 aa22.03■■□□□ 1.12
SYNGR3-203ENST00000563869 ST18O60284 1047 aa22.02■■□□□ 1.12
SYNGR3-203ENST00000563869 XRCC5P13010 732 aaKnown RBP22.02■■□□□ 1.12
SYNGR3-203ENST00000563869 PRKAR2AP13861 404 aaKnown RBP22.02■■□□□ 1.12
SYNGR3-203ENST00000563869 STAT2P52630 851 aa22.02■■□□□ 1.12
SYNGR3-203ENST00000563869 TRAF1Q13077 416 aa22.02■■□□□ 1.12
SYNGR3-203ENST00000563869 CATSPERGQ6ZRH7 1159 aa22.02■■□□□ 1.12
SYNGR3-203ENST00000563869 CTCFLQ8NI51 663 aaPredicted RBP22.02■■□□□ 1.12
SYNGR3-203ENST00000563869 SOCS4Q8WXH5 440 aa22.02■■□□□ 1.12
SYNGR3-203ENST00000563869 NUDT12Q9BQG2 462 aa22.02■■□□□ 1.12
SYNGR3-203ENST00000563869 RPAP3Q9H6T3 665 aaPredicted RBP22.02■■□□□ 1.12
SYNGR3-203ENST00000563869 PDRG1Q9NUG6 133 aa22.02■■□□□ 1.12
SYNGR3-203ENST00000563869 PARP1P09874 1014 aaKnown RBP22.01■■□□□ 1.11
SYNGR3-203ENST00000563869 SNHG28P0DPA3 235 aa22.01■■□□□ 1.11
SYNGR3-203ENST00000563869 LBX2Q6XYB7 198 aa22.01■■□□□ 1.11
SYNGR3-203ENST00000563869 CLEC10AQ8IUN9 316 aa22.01■■□□□ 1.11
SYNGR3-203ENST00000563869 TRMT44Q8IYL2 757 aaKnown RBP22.01■■□□□ 1.11
SYNGR3-203ENST00000563869 PRPF38AQ8NAV1 312 aaKnown RBP22.01■■□□□ 1.11
SYNGR3-203ENST00000563869 P2RX7Q99572 595 aaKnown RBP22.01■■□□□ 1.11
SYNGR3-203ENST00000563869 RBM28Q9NW13 759 aaKnown RBP22.01■■□□□ 1.11
SYNGR3-203ENST00000563869 STXBP5LQ9Y2K9 1186 aa22.01■■□□□ 1.11
SYNGR3-203ENST00000563869 PFASO15067 1338 aa22.01■■□□□ 1.11
SYNGR3-203ENST00000563869 PDHBP11177 359 aa22■■□□□ 1.11
SYNGR3-203ENST00000563869 SMARCA1P28370 1054 aa22■■□□□ 1.11
SYNGR3-203ENST00000563869 MCM2P49736 904 aa22■■□□□ 1.11
SYNGR3-203ENST00000563869 HERVK_113P62684 666 aa22■■□□□ 1.11
SYNGR3-203ENST00000563869 CCDC96Q2M329 555 aa22■■□□□ 1.11
SYNGR3-203ENST00000563869 Q6ZUG5 572 aa22■■□□□ 1.11
SYNGR3-203ENST00000563869 Q7L0L9 218 aa22■■□□□ 1.11
SYNGR3-203ENST00000563869 ZNF654Q8IZM8 581 aa22■■□□□ 1.11
SYNGR3-203ENST00000563869 GPRC5AQ8NFJ5 357 aa22■■□□□ 1.11
SYNGR3-203ENST00000563869 CTDP1Q9Y5B0 961 aaPredicted RBP22■■□□□ 1.11
SYNGR3-203ENST00000563869 FLOT1O75955 427 aa21.99■■□□□ 1.11
SYNGR3-203ENST00000563869 COL6A1P12109 1028 aa21.99■■□□□ 1.11
SYNGR3-203ENST00000563869 COPB2P35606 906 aa21.99■■□□□ 1.11
SYNGR3-203ENST00000563869 EVCP57679 992 aa21.99■■□□□ 1.11
SYNGR3-203ENST00000563869 CHST3Q7LGC8 479 aa21.99■■□□□ 1.11
SYNGR3-203ENST00000563869 SPICE1Q8N0Z3 855 aa21.99■■□□□ 1.11
SYNGR3-203ENST00000563869 SLF1Q9BQI6 1058 aa21.99■■□□□ 1.11
SYNGR3-203ENST00000563869 UBE2OQ9C0C9 1292 aaKnown RBP21.99■■□□□ 1.11
SYNGR3-203ENST00000563869 TXNRD2Q9NNW7 524 aa21.99■■□□□ 1.11
SYNGR3-203ENST00000563869 ISY1Q9ULR0 285 aaKnown RBP21.99■■□□□ 1.11
SYNGR3-203ENST00000563869 MYH6P13533 1939 aa21.99■■□□□ 1.11
SYNGR3-203ENST00000563869 ZBTB43O43298 467 aa21.98■■□□□ 1.11
SYNGR3-203ENST00000563869 DHX16O60231 1041 aaKnown RBP21.98■■□□□ 1.11
SYNGR3-203ENST00000563869 MAPK4P31152 587 aa21.98■■□□□ 1.11
SYNGR3-203ENST00000563869 NEK4P51957 841 aa21.98■■□□□ 1.11
SYNGR3-203ENST00000563869 ZNF543Q08ER8 600 aa21.98■■□□□ 1.11
SYNGR3-203ENST00000563869 IKQ13123 557 aaPredicted RBP21.98■■□□□ 1.11
SYNGR3-203ENST00000563869 USP6NLQ92738 828 aa21.98■■□□□ 1.11
SYNGR3-203ENST00000563869 MTMR10Q9NXD2 777 aa21.98■■□□□ 1.11
SYNGR3-203ENST00000563869 PEX10O60683 326 aa21.97■■□□□ 1.11
SYNGR3-203ENST00000563869 OAZ1P54368 228 aa21.97■■□□□ 1.11
SYNGR3-203ENST00000563869 CCNA1P78396 465 aa21.97■■□□□ 1.11
SYNGR3-203ENST00000563869 CACNB2Q08289 660 aaPredicted RBP21.97■■□□□ 1.11
SYNGR3-203ENST00000563869 TROAPQ12815 778 aa21.97■■□□□ 1.11
SYNGR3-203ENST00000563869 GRM4Q14833 912 aa21.97■■□□□ 1.11
SYNGR3-203ENST00000563869 FAM83BQ5T0W9 1011 aa21.97■■□□□ 1.11
SYNGR3-203ENST00000563869 APOA5Q6Q788 366 aa21.97■■□□□ 1.11
SYNGR3-203ENST00000563869 BTNL9Q6UXG8 535 aa21.97■■□□□ 1.11
SYNGR3-203ENST00000563869 ZNF274Q96GC6 653 aaPredicted RBP21.97■■□□□ 1.11
SYNGR3-203ENST00000563869 UPF3BQ9BZI7 483 aaKnown RBP21.97■■□□□ 1.11
SYNGR3-203ENST00000563869 RBPJLQ9UBG7 517 aa21.97■■□□□ 1.11
SYNGR3-203ENST00000563869 PPP1R9AQ9ULJ8 1098 aa21.97■■□□□ 1.11
SYNGR3-203ENST00000563869 RABGAP1Q9Y3P9 1069 aa21.97■■□□□ 1.11
SYNGR3-203ENST00000563869 FRMPD3Q5JV73 1810 aa21.96■■□□□ 1.11
SYNGR3-203ENST00000563869 RLFQ13129 1914 aa21.96■■□□□ 1.11
SYNGR3-203ENST00000563869 ERVK-9P63128 1117 aa21.96■■□□□ 1.11
SYNGR3-203ENST00000563869 ERVK-24P63145 666 aa21.96■■□□□ 1.11
SYNGR3-203ENST00000563869 CPLX2Q6PUV4 134 aaKnown RBP21.96■■□□□ 1.11
SYNGR3-203ENST00000563869 BRF1Q92994 677 aa21.96■■□□□ 1.11
SYNGR3-203ENST00000563869 A0A0G2JMZ2 1700 aa21.95■■□□□ 1.1
SYNGR3-203ENST00000563869 KLF18A0A0U1RQI7 1052 aa21.95■■□□□ 1.1
SYNGR3-203ENST00000563869 TMEM232C9JQI7 657 aa21.95■■□□□ 1.1
SYNGR3-203ENST00000563869 ZBED4O75132 1171 aa21.95■■□□□ 1.1
SYNGR3-203ENST00000563869 DSG3P32926 999 aa21.95■■□□□ 1.1
SYNGR3-203ENST00000563869 RGS2P41220 211 aa21.95■■□□□ 1.1
SYNGR3-203ENST00000563869 Q3C1V9 767 aa21.95■■□□□ 1.1
SYNGR3-203ENST00000563869 MORN1Q5T089 497 aa21.95■■□□□ 1.1
SYNGR3-203ENST00000563869 LHX8Q68G74 356 aa21.95■■□□□ 1.1
SYNGR3-203ENST00000563869 GPR142Q7Z601 462 aa21.95■■□□□ 1.1
SYNGR3-203ENST00000563869 CCAR1Q8IX12 1150 aaKnown RBP21.95■■□□□ 1.1
SYNGR3-203ENST00000563869 FANCBQ8NB91 859 aa21.95■■□□□ 1.1
SYNGR3-203ENST00000563869 NUP133Q8WUM0 1156 aa21.95■■□□□ 1.1
SYNGR3-203ENST00000563869 PORCNQ9H237 461 aa21.95■■□□□ 1.1
SYNGR3-203ENST00000563869 NID2Q14112 1375 aa21.95■■□□□ 1.1
SYNGR3-203ENST00000563869 CCND3P30281 292 aaPredicted RBP21.94■■□□□ 1.1
SYNGR3-203ENST00000563869 ZSCAN31Q96LW9 406 aaPredicted RBP21.94■■□□□ 1.1
SYNGR3-203ENST00000563869 MAF1Q9H063 256 aa21.94■■□□□ 1.1
SYNGR3-203ENST00000563869 ADAMTS5Q9UNA0 930 aa21.94■■□□□ 1.1
SYNGR3-203ENST00000563869 PALM3A6NDB9 673 aaPredicted RBP21.93■■□□□ 1.1
SYNGR3-203ENST00000563869 COL11A1P12107 1806 aaPredicted RBP21.93■■□□□ 1.1
SYNGR3-203ENST00000563869 METAP2P50579 478 aaKnown RBP eCLIP21.93■■□□□ 1.1
SYNGR3-203ENST00000563869 CCL14Q16627 93 aa21.93■■□□□ 1.1
SYNGR3-203ENST00000563869 RTN1Q16799 776 aa21.93■■□□□ 1.1
SYNGR3-203ENST00000563869 LRRC26Q2I0M4 334 aa21.93■■□□□ 1.1
SYNGR3-203ENST00000563869 PLEKHH3Q7Z736 793 aa21.93■■□□□ 1.1
SYNGR3-203ENST00000563869 APBA2Q99767 749 aa21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms