RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 TNMDQ9H2S6 317 aa20.63■□□□□ 0.89
COMMD4-208ENST00000563220 GRPEL1Q9HAV7 217 aa20.63■□□□□ 0.89
COMMD4-208ENST00000563220 ZNF112Q9UJU3 913 aa20.63■□□□□ 0.89
COMMD4-208ENST00000563220 SRPRBQ9Y5M8 271 aaKnown RBP20.63■□□□□ 0.89
COMMD4-208ENST00000563220 MORC2Q9Y6X9 1032 aaPredicted RBP20.63■□□□□ 0.89
COMMD4-208ENST00000563220 IKQ13123 557 aaPredicted RBP20.62■□□□□ 0.89
COMMD4-208ENST00000563220 GINM1Q9NU53 330 aa20.62■□□□□ 0.89
COMMD4-208ENST00000563220 BIN2Q9UBW5 565 aaPredicted RBP20.62■□□□□ 0.89
COMMD4-208ENST00000563220 PFKFB1P16118 471 aa20.62■□□□□ 0.89
COMMD4-208ENST00000563220 INF2Q27J81 1249 aa20.62■□□□□ 0.89
COMMD4-208ENST00000563220 RESP18Q5W5W9 173 aa20.62■□□□□ 0.89
COMMD4-208ENST00000563220 PPP1R18Q6NYC8 613 aa20.62■□□□□ 0.89
COMMD4-208ENST00000563220 FUCA2Q9BTY2 467 aa20.62■□□□□ 0.89
COMMD4-208ENST00000563220 RBSNQ9H1K0 784 aa20.62■□□□□ 0.89
COMMD4-208ENST00000563220 SH2D4AQ9H788 454 aa20.62■□□□□ 0.89
COMMD4-208ENST00000563220 TMEM260Q9NX78 707 aa20.62■□□□□ 0.89
COMMD4-208ENST00000563220 HPSEQ9Y251 543 aa20.62■□□□□ 0.89
COMMD4-208ENST00000563220 PPP2R3BQ9Y5P8 575 aa20.62■□□□□ 0.89
COMMD4-208ENST00000563220 XRCC6P12956 609 aaKnown RBP eCLIP20.61■□□□□ 0.89
COMMD4-208ENST00000563220 MCM7P33993 719 aa20.61■□□□□ 0.89
COMMD4-208ENST00000563220 MRE11P49959 708 aa20.61■□□□□ 0.89
COMMD4-208ENST00000563220 ADCY7P51828 1080 aa20.61■□□□□ 0.89
COMMD4-208ENST00000563220 PTGDRQ13258 359 aa20.61■□□□□ 0.89
COMMD4-208ENST00000563220 MAP3K11Q16584 847 aa20.61■□□□□ 0.89
COMMD4-208ENST00000563220 SPECC1Q5M775 1068 aa20.61■□□□□ 0.89
COMMD4-208ENST00000563220 JAKMIP3Q5VZ66 844 aa20.61■□□□□ 0.89
COMMD4-208ENST00000563220 RBM43Q6ZSC3 357 aaKnown RBP20.61■□□□□ 0.89
COMMD4-208ENST00000563220 KRT25Q7Z3Z0 450 aa20.61■□□□□ 0.89
COMMD4-208ENST00000563220 CKAP2LQ8IYA6 745 aa20.61■□□□□ 0.89
COMMD4-208ENST00000563220 PRR12Q9ULL5 1215 aa20.61■□□□□ 0.89
COMMD4-208ENST00000563220 PITPNM2Q9BZ72 1349 aa20.61■□□□□ 0.89
COMMD4-208ENST00000563220 FAM237AA0A1B0GTK4 181 aa20.6■□□□□ 0.89
COMMD4-208ENST00000563220 BMP15O95972 392 aa20.6■□□□□ 0.89
COMMD4-208ENST00000563220 DPY19L2Q6NUT2 758 aa20.6■□□□□ 0.89
COMMD4-208ENST00000563220 DLK2Q6UY11 383 aa20.6■□□□□ 0.89
COMMD4-208ENST00000563220 REXO1Q8N1G1 1221 aaKnown RBP20.6■□□□□ 0.89
COMMD4-208ENST00000563220 HOOK2Q96ED9 719 aa20.6■□□□□ 0.89
COMMD4-208ENST00000563220 TSPY26PQ9H489 355 aa20.6■□□□□ 0.89
COMMD4-208ENST00000563220 RIC8AQ9NPQ8 531 aa20.6■□□□□ 0.89
COMMD4-208ENST00000563220 PCDHA1Q9Y5I3 950 aa20.6■□□□□ 0.89
COMMD4-208ENST00000563220 KINO60870 393 aaKnown RBP20.6■□□□□ 0.89
COMMD4-208ENST00000563220 ZNF202O95125 648 aa20.6■□□□□ 0.89
COMMD4-208ENST00000563220 STAT2P52630 851 aa20.6■□□□□ 0.89
COMMD4-208ENST00000563220 ATP2C1P98194 919 aaPredicted RBP20.6■□□□□ 0.89
COMMD4-208ENST00000563220 C4orf32Q8N8J7 132 aa20.6■□□□□ 0.89
COMMD4-208ENST00000563220 ZKSCAN4Q969J2 545 aaPredicted RBP20.6■□□□□ 0.89
COMMD4-208ENST00000563220 NONOQ15233 471 aaKnown RBP eCLIP20.59■□□□□ 0.89
COMMD4-208ENST00000563220 ZNF579Q8NAF0 562 aaKnown RBP20.59■□□□□ 0.89
COMMD4-208ENST00000563220 WRNIP1Q96S55 665 aa20.59■□□□□ 0.89
COMMD4-208ENST00000563220 FEZ1Q99689 392 aa20.59■□□□□ 0.89
COMMD4-208ENST00000563220 CSRNP2Q9H175 543 aa20.59■□□□□ 0.89
COMMD4-208ENST00000563220 SCYL3Q8IZE3 742 aa20.58■□□□□ 0.89
COMMD4-208ENST00000563220 KLRG1Q96E93 195 aa20.58■□□□□ 0.89
COMMD4-208ENST00000563220 L3MBTL3Q96JM7 780 aaPredicted RBP20.58■□□□□ 0.89
COMMD4-208ENST00000563220 AMNQ9BXJ7 453 aa20.58■□□□□ 0.89
COMMD4-208ENST00000563220 SSC5DA1L4H1 1573 aa20.58■□□□□ 0.88
COMMD4-208ENST00000563220 CLK2P49760 499 aaKnown RBP20.58■□□□□ 0.88
COMMD4-208ENST00000563220 UBE2SQ16763 222 aa20.58■□□□□ 0.88
COMMD4-208ENST00000563220 FBXO11Q86XK2 927 aa20.58■□□□□ 0.88
COMMD4-208ENST00000563220 TBCKQ8TEA7 893 aa20.58■□□□□ 0.88
COMMD4-208ENST00000563220 KIAA1683Q9H0B3 1180 aa20.58■□□□□ 0.88
COMMD4-208ENST00000563220 PSTPIP2Q9H939 334 aa20.58■□□□□ 0.88
COMMD4-208ENST00000563220 PLA2G6O60733 806 aa20.57■□□□□ 0.88
COMMD4-208ENST00000563220 SYKP43405 635 aa20.57■□□□□ 0.88
COMMD4-208ENST00000563220 MRPL12P52815 198 aaKnown RBP20.57■□□□□ 0.88
COMMD4-208ENST00000563220 DGKZQ13574 1117 aa20.57■□□□□ 0.88
COMMD4-208ENST00000563220 SUPT20HL1Q3ZLR7 823 aa20.57■□□□□ 0.88
COMMD4-208ENST00000563220 USP49Q70CQ1 688 aa20.57■□□□□ 0.88
COMMD4-208ENST00000563220 CHURC1Q8WUH1 139 aa20.57■□□□□ 0.88
COMMD4-208ENST00000563220 CUL5Q93034 780 aa20.57■□□□□ 0.88
COMMD4-208ENST00000563220 DCPSQ96C86 337 aaKnown RBP20.57■□□□□ 0.88
COMMD4-208ENST00000563220 CTAGE5O15320 804 aa20.56■□□□□ 0.88
COMMD4-208ENST00000563220 EDIL3O43854 480 aa20.56■□□□□ 0.88
COMMD4-208ENST00000563220 TAL1P17542 331 aaPredicted RBP20.56■□□□□ 0.88
COMMD4-208ENST00000563220 IL17AQ16552 155 aa20.56■□□□□ 0.88
COMMD4-208ENST00000563220 FERMT2Q96AC1 680 aa20.56■□□□□ 0.88
COMMD4-208ENST00000563220 KIFC2Q96AC6 838 aa20.56■□□□□ 0.88
COMMD4-208ENST00000563220 FBXO28Q9NVF7 368 aa20.56■□□□□ 0.88
COMMD4-208ENST00000563220 KCNH3Q9ULD8 1083 aa20.56■□□□□ 0.88
COMMD4-208ENST00000563220 ADM5C9JUS6 153 aa20.56■□□□□ 0.88
COMMD4-208ENST00000563220 PTPRAP18433 802 aa20.56■□□□□ 0.88
COMMD4-208ENST00000563220 LETM2Q2VYF4 491 aa20.56■□□□□ 0.88
COMMD4-208ENST00000563220 USH1GQ495M9 461 aa20.56■□□□□ 0.88
COMMD4-208ENST00000563220 NEK8Q86SG6 692 aa20.56■□□□□ 0.88
COMMD4-208ENST00000563220 SDF4Q9BRK5 362 aa20.56■□□□□ 0.88
COMMD4-208ENST00000563220 TMEM60Q9H2L4 133 aa20.56■□□□□ 0.88
COMMD4-208ENST00000563220 FEM1BQ9UK73 627 aa20.56■□□□□ 0.88
COMMD4-208ENST00000563220 GLTPD2A6NH11 291 aa20.55■□□□□ 0.88
COMMD4-208ENST00000563220 USP17L15C9J2P7 530 aa20.55■□□□□ 0.88
COMMD4-208ENST00000563220 USP17L13C9JLJ4 530 aa20.55■□□□□ 0.88
COMMD4-208ENST00000563220 USP17L11C9JVI0 530 aa20.55■□□□□ 0.88
COMMD4-208ENST00000563220 USP17L18D6R9N7 530 aa20.55■□□□□ 0.88
COMMD4-208ENST00000563220 USP17L22D6RA61 530 aa20.55■□□□□ 0.88
COMMD4-208ENST00000563220 USP17L17D6RBQ6 530 aa20.55■□□□□ 0.88
COMMD4-208ENST00000563220 USP17L19D6RCP7 530 aa20.55■□□□□ 0.88
COMMD4-208ENST00000563220 USP17L20D6RJB6 530 aa20.55■□□□□ 0.88
COMMD4-208ENST00000563220 GRIN3BO60391 1043 aa20.55■□□□□ 0.88
COMMD4-208ENST00000563220 USP2O75604 605 aaPredicted RBP20.55■□□□□ 0.88
COMMD4-208ENST00000563220 USP17L24Q0WX57 530 aa20.55■□□□□ 0.88
COMMD4-208ENST00000563220 SPP2Q13103 211 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms