RNA–Protein interactions for RNA: ENST00000562542.1

KATNB1-202, Transcript of katanin regulatory subunit B1, humanhuman

TSL 2

Gene KATNB1, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KATNB1-202ENST00000562542 SMIM22K7EJ46 135 aa22.14■■□□□ 1.13
KATNB1-202ENST00000562542 ERC2O15083 957 aa22.14■■□□□ 1.13
KATNB1-202ENST00000562542 GTPBP6O43824 516 aaPredicted RBP22.14■■□□□ 1.13
KATNB1-202ENST00000562542 MBD4O95243 580 aa22.14■■□□□ 1.13
KATNB1-202ENST00000562542 ZKSCAN2Q63HK3 967 aa22.14■■□□□ 1.13
KATNB1-202ENST00000562542 CXCL17Q6UXB2 119 aa22.14■■□□□ 1.13
KATNB1-202ENST00000562542 ARMCX2Q7L311 632 aa22.14■■□□□ 1.13
KATNB1-202ENST00000562542 EXOC6BQ9Y2D4 811 aa22.14■■□□□ 1.13
KATNB1-202ENST00000562542 ARIH1Q9Y4X5 557 aaPredicted RBP22.14■■□□□ 1.13
KATNB1-202ENST00000562542 PCDHA11Q9Y5I1 949 aa22.14■■□□□ 1.13
KATNB1-202ENST00000562542 USP17L12C9JPN9 530 aa22.13■■□□□ 1.13
KATNB1-202ENST00000562542 USP17L21D6R901 530 aa22.13■■□□□ 1.13
KATNB1-202ENST00000562542 ZBED4O75132 1171 aa22.13■■□□□ 1.13
KATNB1-202ENST00000562542 TMEM31Q5JXX7 168 aa22.13■■□□□ 1.13
KATNB1-202ENST00000562542 C12orf60Q5U649 245 aa22.13■■□□□ 1.13
KATNB1-202ENST00000562542 C16orf86Q6ZW13 317 aa22.13■■□□□ 1.13
KATNB1-202ENST00000562542 RPUSD2Q8IZ73 545 aaKnown RBP22.13■■□□□ 1.13
KATNB1-202ENST00000562542 IL1RAPL2Q9NP60 686 aa22.13■■□□□ 1.13
KATNB1-202ENST00000562542 REV3LO60673 3130 aa22.12■■□□□ 1.13
KATNB1-202ENST00000562542 ATP2A2P16615 1042 aaKnown RBP22.12■■□□□ 1.13
KATNB1-202ENST00000562542 BCL11AQ9H165 835 aa22.12■■□□□ 1.13
KATNB1-202ENST00000562542 CABYRO75952 493 aa22.11■■□□□ 1.13
KATNB1-202ENST00000562542 TNFAIP2Q03169 654 aa22.11■■□□□ 1.13
KATNB1-202ENST00000562542 ITGA7Q13683 1181 aa22.11■■□□□ 1.13
KATNB1-202ENST00000562542 ITPRIPQ8IWB1 547 aa22.11■■□□□ 1.13
KATNB1-202ENST00000562542 FTSJ3Q8IY81 847 aaKnown RBP22.11■■□□□ 1.13
KATNB1-202ENST00000562542 CCDC144CPQ8IYA2 1237 aa22.11■■□□□ 1.13
KATNB1-202ENST00000562542 PRPF38AQ8NAV1 312 aaKnown RBP22.11■■□□□ 1.13
KATNB1-202ENST00000562542 NOC4LQ9BVI4 516 aaKnown RBP22.11■■□□□ 1.13
KATNB1-202ENST00000562542 TRPV6Q9H1D0 765 aa22.11■■□□□ 1.13
KATNB1-202ENST00000562542 RAVER2Q9HCJ3 691 aaKnown RBP22.11■■□□□ 1.13
KATNB1-202ENST00000562542 RFXAPO00287 272 aa22.1■■□□□ 1.13
KATNB1-202ENST00000562542 CTAGE5O15320 804 aa22.1■■□□□ 1.13
KATNB1-202ENST00000562542 KIFC2Q96AC6 838 aa22.1■■□□□ 1.13
KATNB1-202ENST00000562542 CERS4Q9HA82 394 aa22.1■■□□□ 1.13
KATNB1-202ENST00000562542 FBXO40Q9UH90 709 aa22.1■■□□□ 1.13
KATNB1-202ENST00000562542 MTCH2Q9Y6C9 303 aa22.1■■□□□ 1.13
KATNB1-202ENST00000562542 FSCN1Q16658 493 aaKnown RBP22.09■■□□□ 1.13
KATNB1-202ENST00000562542 SLFNL1Q499Z3 407 aa22.09■■□□□ 1.13
KATNB1-202ENST00000562542 TMEM67Q5HYA8 995 aa22.09■■□□□ 1.13
KATNB1-202ENST00000562542 TLK2Q86UE8 772 aa22.09■■□□□ 1.13
KATNB1-202ENST00000562542 SLC43A3Q8NBI5 491 aa22.09■■□□□ 1.13
KATNB1-202ENST00000562542 FGD4Q96M96 766 aa22.09■■□□□ 1.13
KATNB1-202ENST00000562542 AP5M1Q9H0R1 490 aa22.09■■□□□ 1.13
KATNB1-202ENST00000562542 WNT8AQ9H1J5 351 aa22.09■■□□□ 1.13
KATNB1-202ENST00000562542 COG5Q9UP83 839 aa22.09■■□□□ 1.13
KATNB1-202ENST00000562542 BAZ2AQ9UIF9 1905 aaKnown RBP22.09■■□□□ 1.13
KATNB1-202ENST00000562542 C11orf97A0A1B0GVM6 126 aaPredicted RBP22.08■■□□□ 1.13
KATNB1-202ENST00000562542 F5H6K3 240 aa22.08■■□□□ 1.13
KATNB1-202ENST00000562542 ATP2A1O14983 1001 aa22.08■■□□□ 1.13
KATNB1-202ENST00000562542 ZEB2O60315 1214 aa22.08■■□□□ 1.13
KATNB1-202ENST00000562542 B4GALT4O60513 344 aa22.08■■□□□ 1.13
KATNB1-202ENST00000562542 NDUFB10O96000 172 aa22.08■■□□□ 1.13
KATNB1-202ENST00000562542 CA3P07451 260 aa22.08■■□□□ 1.13
KATNB1-202ENST00000562542 KLRC3Q07444 240 aa22.08■■□□□ 1.13
KATNB1-202ENST00000562542 SCLYQ96I15 445 aa22.08■■□□□ 1.13
KATNB1-202ENST00000562542 HOMER2Q9NSB8 354 aa22.08■■□□□ 1.13
KATNB1-202ENST00000562542 SLC4A4Q9Y6R1 1079 aa22.08■■□□□ 1.13
KATNB1-202ENST00000562542 NKX3-2P78367 333 aa22.07■■□□□ 1.12
KATNB1-202ENST00000562542 CEP85Q6P2H3 762 aa22.07■■□□□ 1.12
KATNB1-202ENST00000562542 CHST13Q8NET6 341 aa22.07■■□□□ 1.12
KATNB1-202ENST00000562542 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.07■■□□□ 1.12
KATNB1-202ENST00000562542 MCM3APO60318 1980 aa22.07■■□□□ 1.12
KATNB1-202ENST00000562542 ASTN1O14525 1302 aa22.06■■□□□ 1.12
KATNB1-202ENST00000562542 IFIT2P09913 472 aaKnown RBP22.06■■□□□ 1.12
KATNB1-202ENST00000562542 ADD2P35612 726 aa22.06■■□□□ 1.12
KATNB1-202ENST00000562542 CNTN2Q02246 1040 aa22.06■■□□□ 1.12
KATNB1-202ENST00000562542 HSP90AB4PQ58FF6 505 aa22.06■■□□□ 1.12
KATNB1-202ENST00000562542 STK11IPQ8N1F8 1099 aa22.06■■□□□ 1.12
KATNB1-202ENST00000562542 CLASRPQ8N2M8 674 aaKnown RBP22.06■■□□□ 1.12
KATNB1-202ENST00000562542 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.06■■□□□ 1.12
KATNB1-202ENST00000562542 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.06■■□□□ 1.12
KATNB1-202ENST00000562542 SEZ6LQ9BYH1 1024 aa22.06■■□□□ 1.12
KATNB1-202ENST00000562542 KATNBL1Q9H079 304 aa22.06■■□□□ 1.12
KATNB1-202ENST00000562542 FAM86C2PA6NEL3 165 aa22.05■■□□□ 1.12
KATNB1-202ENST00000562542 DYNC1LI2O43237 492 aaPredicted RBP22.05■■□□□ 1.12
KATNB1-202ENST00000562542 PSMC6P62333 389 aa22.05■■□□□ 1.12
KATNB1-202ENST00000562542 TTLL4Q14679 1199 aa22.05■■□□□ 1.12
KATNB1-202ENST00000562542 KRT40Q6A162 431 aa22.05■■□□□ 1.12
KATNB1-202ENST00000562542 CTR9Q6PD62 1173 aa22.05■■□□□ 1.12
KATNB1-202ENST00000562542 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.05■■□□□ 1.12
KATNB1-202ENST00000562542 DEFB128Q7Z7B8 93 aa22.05■■□□□ 1.12
KATNB1-202ENST00000562542 RHPN1Q8TCX5 695 aa22.05■■□□□ 1.12
KATNB1-202ENST00000562542 ARNTL2Q8WYA1 636 aa22.05■■□□□ 1.12
KATNB1-202ENST00000562542 HLA-CQ95604 372 aa22.05■■□□□ 1.12
KATNB1-202ENST00000562542 SLC38A10Q9HBR0 1119 aa22.05■■□□□ 1.12
KATNB1-202ENST00000562542 PAG1Q9NWQ8 432 aa22.05■■□□□ 1.12
KATNB1-202ENST00000562542 GRIN2DO15399 1336 aa22.05■■□□□ 1.12
KATNB1-202ENST00000562542 TRANK1O15050 2925 aa22.04■■□□□ 1.12
KATNB1-202ENST00000562542 TLL1O43897 1013 aa22.04■■□□□ 1.12
KATNB1-202ENST00000562542 PFKMP08237 780 aa22.04■■□□□ 1.12
KATNB1-202ENST00000562542 POU3F3P20264 500 aaPredicted RBP22.04■■□□□ 1.12
KATNB1-202ENST00000562542 MKNK2Q9HBH9 465 aa22.04■■□□□ 1.12
KATNB1-202ENST00000562542 NYAP2Q9P242 653 aa22.04■■□□□ 1.12
KATNB1-202ENST00000562542 CLIP2Q9UDT6 1046 aa22.04■■□□□ 1.12
KATNB1-202ENST00000562542 ISY1Q9ULR0 285 aaKnown RBP22.04■■□□□ 1.12
KATNB1-202ENST00000562542 GNEQ9Y223 722 aaKnown RBP22.04■■□□□ 1.12
KATNB1-202ENST00000562542 LRRC37A2A6NM11 1700 aa22.03■■□□□ 1.12
KATNB1-202ENST00000562542 PRRC2BQ5JSZ5 2229 aaKnown RBP22.03■■□□□ 1.12
KATNB1-202ENST00000562542 ACTN1P12814 892 aa22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms